Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Eucgr.J01742 Eucalyptus grandis HOM05D004493 ORTHO05D005117 7.9e-277 956.4 468 100.0
PGR119G2408 Punica granatum HOM05D004493 ORTHO05D005117 2.3e-90 337.0 475 43.8
TWI34G1214 Tripterygium wilfordii HOM05D004493 ORTHO05D005117 5.6e-89 332.4 472 40.3
Actinidia00919 Actinidia chinensis HOM05D004493 ORTHO05D005117 1.1e-84 318.2 471 40.3
TAR623G0338 Trochodendron aralioides HOM05D004493 ORTHO05D005117 9.2e-84 315.1 471 40.6
Dinv06245 Davidia involucrata HOM05D004493 ORTHO05D005117 1.2e-83 314.7 471 39.3
Dinv15519 Davidia involucrata HOM05D004493 ORTHO05D005117 1.2e-83 314.7 471 39.3
Haze_22920 Corylus avellana HOM05D004493 ORTHO05D005117 2.3e-82 310.5 471 39.9
QL01p007857 Quercus lobata HOM05D004493 ORTHO05D005117 4.3e-81 306.2 467 39.8
Cfa009530 Carpinus fangiana HOM05D004493 ORTHO05D005117 1.6e-80 304.3 473 39.3
Manes.15G110800 Manihot esculenta HOM05D004493 ORTHO05D005117 5.2e-79 299.3 473 38.5
Nn7g36938 Nelumbo nucifera HOM05D004493 ORTHO05D005117 5.2e-79 299.3 473 39.5
Rhsim10G0100200 Rhododendron simsii HOM05D004493 ORTHO05D005117 4.4e-78 296.2 467 39.4
GSVIVG01025508001 Vitis vinifera HOM05D004493 ORTHO05D005117 9.8e-78 295.0 465 40.4
DCAR_024091 Daucus carota HOM05D004493 ORTHO05D005117 2.9e-77 293.5 475 39.8
CANSAT11G1563 Cannabis sativa HOM05D004493 ORTHO05D005117 3.7e-77 293.1 475 37.7
Potri.003G223400 Populus trichocarpa HOM05D004493 ORTHO05D005117 3.7e-77 293.1 471 38.0
Thecc.09G205800 Theobroma cacao HOM05D004493 ORTHO05D005117 6.4e-77 292.4 473 37.2
Gorai.004G097900 Gossypium raimondii HOM05D004493 ORTHO05D005117 1.1e-76 291.6 465 38.7
Gohir.D08G092400 Gossypium hirsutum HOM05D004493 ORTHO05D005117 1.9e-76 290.8 465 38.7
Sabra03G0166000 Salix brachista HOM05D004493 ORTHO05D005117 5.4e-76 289.3 474 37.6
THA.LOC104822690 Tarenaya hassleriana HOM05D004493 ORTHO05D005117 9.2e-76 288.5 474 38.2
CiPaw.13G180100 Carya illinoinensis HOM05D004493 ORTHO05D005117 1.2e-75 288.1 471 38.6
Duzib168G1306 Durio zibethinus HOM05D004493 ORTHO05D005117 1.6e-75 287.7 472 37.3
Thhalv10011181m.g Eutrema salsugineum HOM05D004493 ORTHO05D005117 3.5e-75 286.6 474 38.2
Sed0013310 Sechium edule HOM05D004493 ORTHO05D005117 3.5e-75 286.6 473 39.3
arahy.Tifrunner.gnm1.ann1.578M4A Arachis hypogaea HOM05D004493 ORTHO05D005117 6.0e-75 285.8 476 37.4
arahy.Tifrunner.gnm1.ann1.M9LRNQ Arachis hypogaea HOM05D004493 ORTHO05D005117 6.0e-75 285.8 476 37.4
A08p00540 Brassica napus HOM05D004493 ORTHO05D005117 6.0e-75 285.8 474 37.6
MD11G1001000 Malus domestica HOM05D004493 ORTHO05D005117 7.8e-75 285.4 469 37.7
BraA08t32112Z Brassica rapa HOM05D004493 ORTHO05D005117 1.0e-74 285.0 474 38.0
AL1G63570 Arabidopsis lyrata HOM05D004493 ORTHO05D005117 1.3e-74 284.6 484 37.2
Prupe.6G001200 Prunus persica HOM05D004493 ORTHO05D005117 3.0e-74 283.5 471 38.9
BcaC01g01535 Brassica carinata HOM05D004493 ORTHO05D005117 1.1e-73 281.6 470 37.4
C03p92870 Brassica napus HOM05D004493 ORTHO05D005117 1.1e-73 281.6 470 37.4
Sp1g41160 Schrenkiella parvula HOM05D004493 ORTHO05D005117 1.1e-73 281.6 474 38.0
BolC3t21593H Brassica oleracea HOM05D004493 ORTHO05D005117 5.6e-73 279.3 470 37.2
Glyma.06G239100 Glycine max HOM05D004493 ORTHO05D005117 9.5e-73 278.5 471 37.2
AT1G55540 Arabidopsis thaliana HOM05D004493 ORTHO05D005117 1.6e-72 277.7 484 36.4
CARHR045230 Cardamine hirsuta HOM05D004493 ORTHO05D005117 1.6e-72 277.7 474 37.3
Glyma.18G007300 Glycine max HOM05D004493 ORTHO05D005117 1.6e-72 277.7 471 36.9
FAN11G0901 Fragaria x ananassa HOM05D004493 ORTHO05D005117 2.8e-72 276.9 475 36.4
PSO384G0423 Papaver somniferum HOM05D004493 ORTHO05D005117 3.6e-72 276.6 474 36.7
RcHm_v2.0_Chr5g0084071 Rosa chinensis HOM05D004493 ORTHO05D005117 6.2e-72 275.8 471 36.7
FvH4_3g45960 Fragaria vesca HOM05D004493 ORTHO05D005117 1.4e-71 274.6 475 36.2
Oeu023963.1 Olea europaea HOM05D004493 ORTHO05D005117 3.1e-71 273.5 513 35.9
FAN25G0645 Fragaria x ananassa HOM05D004493 ORTHO05D005117 5.2e-71 272.7 475 36.0
MBI04_g11451_MAGBIO Magnolia biondii HOM05D004493 ORTHO05D005117 8.9e-71 271.9 475 36.2
Phvul.007G078700 Phaseolus vulgaris HOM05D004493 ORTHO05D005117 4.4e-70 269.6 469 36.0
Aa31LG10G700 Aethionema arabicum HOM05D004493 ORTHO05D005117 5.8e-70 269.2 474 37.6
Carub.0001s4405 Capsella rubella HOM05D004493 ORTHO05D005117 5.8e-70 269.2 476 36.8
Lj5g0011313 Lotus japonicus HOM05D004493 ORTHO05D005117 1.3e-69 268.1 468 35.9
Ah.06g182270 Amaranthus hybridus HOM05D004493 ORTHO05D005117 1.4e-68 264.6 486 35.2
Ciclev10014017m.g Citrus clementina HOM05D004493 ORTHO05D005117 1.4e-68 264.6 477 36.3
MELO3C011789.2 Cucumis melo HOM05D004493 ORTHO05D005117 3.2e-68 263.5 469 38.0
Medtr1g069005 Medicago truncatula HOM05D004493 ORTHO05D005117 5.4e-68 262.7 466 35.0
Ca_09617_v3 Cicer arietinum L. HOM05D004493 ORTHO05D005117 2.1e-67 260.8 463 35.2
CsaV3_5G029430 Cucumis sativus L. HOM05D004493 ORTHO05D005117 2.1e-67 260.8 468 37.8
Lsat_1_v5_gn_1_71321 Lactuca sativa HOM05D004493 ORTHO05D005117 2.1e-67 260.8 471 35.9
TPR.G22583 Trifolium pratense HOM05D004493 ORTHO05D005117 4.6e-67 259.6 470 35.1
Lalb_Chr13g0295751 Lupinus albus HOM05D004493 ORTHO05D005117 1.3e-66 258.1 480 36.7
Psat6g065800 Pisum sativum HOM05D004493 ORTHO05D005117 3.9e-66 256.5 463 34.8
Eucgr.J01744 Eucalyptus grandis HOM05D004493 ORTHO05D005117 5.6e-65 252.7 285 51.6
Aqoxy1G00107 Aquilegia oxysepala HOM05D004493 ORTHO05D005117 1.2e-62 245.0 470 33.0
ECA248G0177 Erigeron canadensis HOM05D004493 ORTHO05D000562 3.8e-61 240.0 471 34.4
Nitab4.5_0000075g0180 Nicotiana tabacum HOM05D004493 ORTHO05D005117 3.8e-61 240.0 475 32.8
AUR62015878 Chenopodium quinoa HOM05D004493 ORTHO05D005117 4.9e-61 239.6 527 31.5
CAN.G215.14 Capsicum annuum HOM05D004493 ORTHO05D005117 1.1e-60 238.4 472 34.7
EL10Ac4g07695 Beta vulgaris HOM05D004493 ORTHO05D005117 1.9e-60 237.7 468 33.1
Migut.N00529 Erythranthe guttata HOM05D004493 ORTHO05D005117 1.9e-60 237.7 472 32.8
HPP92_014371 Vanilla planifolia HOM05D004493 ORTHO05D005117 7.1e-60 235.7 469 32.4
FAN16G3321 Fragaria x ananassa HOM05D004493 ORTHO05D005117 9.3e-60 235.3 516 32.9
SalBow3G2955 Salvia bowleyana HOM05D004493 ORTHO05D005117 9.3e-60 235.3 480 33.3
ATR0068G024 Amborella trichopoda HOM05D004493 ORTHO05D005117 1.6e-59 234.6 433 36.5
Sopen02g010770 Solanum pennellii HOM05D004493 ORTHO05D005117 2.1e-59 234.2 478 33.7
Atru.chr3.2057 Acer truncatum HOM05D004493 ORTHO05D005117 1.0e-58 231.9 367 38.4
Cc01_g00330 Coffea canephora HOM05D004493 ORTHO05D005117 8.7e-58 228.8 469 33.7
SGA_v2.0_scaffold6G03332 Striga asiatica HOM05D004493 ORTHO05D005117 2.1e-56 224.2 471 31.4
Zm00001eb331030 Zea mays HOM05D004493 ORTHO05D005117 1.7e-53 214.5 479 31.5
Rhsim13G0209100 Rhododendron simsii HOM05D004493 ORTHO05D005117 4.2e-52 209.9 308 40.3
Lj2A889G19 Lonicera japonica HOM05D004493 ORTHO05D005117 1.3e-50 204.9 384 34.1
ClCG11G012960 Citrullus lanatus HOM05D004493 ORTHO05D005117 8.7e-50 202.2 464 32.3
QL01p007875 Quercus lobata HOM05D004493 ORTHO05D005117 6.9e-47 192.6 335 35.2
Cpa.g.sc119.15 Carica papaya HOM05D004493 ORTHO05D005117 3.4e-46 190.3 471 33.1
FAN21G4070 Fragaria x ananassa HOM05D004493 ORTHO05D005117 2.9e-45 187.2 505 29.9
Nitab4.5_0000890g0180 Nicotiana tabacum HOM05D004493 ORTHO05D005117 6.0e-43 179.5 487 28.7
Mapoly0022s0121 Marchantia polymorpha HOM05D004493 ORTHO05D005117 4.3e-41 173.3 476 28.8
AUR62020345 Chenopodium quinoa HOM05D004493 ORTHO05D005117 6.5e-37 159.5 332 31.6
CDE02G2692 Ceratophyllum demersum HOM05D004493 ORTHO05D005117 2.5e-36 157.5 242 38.4
Hund05058 Selenicereus undatus HOM05D004493 ORTHO05D005117 1.8e-34 151.4 254 37.4
VMungo0720G0327 Vigna mungo HOM05D004493 ORTHO05D005117 1.9e-33 147.9 198 40.9
AagrBONN_evm.TU.Sc2ySwM_117.2650 Anthoceros agrestis HOM05D004493 ORTHO05D005117 5.7e-33 146.4 460 28.0
Eucgr.J01832 Eucalyptus grandis HOM05D004493 ORTHO05D005117 1.6e-32 144.8 161 51.6
Sc06g0004140 Simmondsia chinensis HOM05D004493 ORTHO05D005117 2.8e-32 144.1 192 42.7
Hma1.2p1_0589F.1_g184760 Hydrangea macrophylla HOM05D004493 ORTHO05D005117 3.7e-32 143.7 193 42.0
VMungo0720G2527 Vigna mungo HOM05D004493 ORTHO05D005117 3.7e-32 143.7 240 36.7
Pp3c13_12950 Physcomitrium patens HOM05D004493 ORTHO05D005117 4.8e-32 143.3 472 27.3
COL.COLO4_35067 Corchorus olitorius HOM05D004493 ORTHO05D005117 1.1e-31 142.1 258 35.3
unitig_0.g1239 Utricularia gibba HOM05D004493 ORTHO05D005117 2.0e-30 137.9 246 34.1
Solyc02g032480.3 Solanum lycopersicum HOM05D004493 ORTHO05D005117 1.3e-26 125.2 295 32.5
Peaxi162Scf00186g01612 Petunia axillaris HOM05D004493 ORTHO05D005117 3.9e-26 123.6 246 33.7
Solyc02g032490.3 Solanum lycopersicum HOM05D004493 ORTHO05D005117 5.7e-25 119.8 194 36.1
BcaNung06979 Brassica carinata HOM05D004493 ORTHO05D005117 3.1e-23 114.0 195 36.9
Hund28035 Selenicereus undatus HOM05D004493 ORTHO05D005117 4.1e-23 113.6 181 40.3
Hund28037 Selenicereus undatus HOM05D004493 ORTHO05D005117 4.1e-23 113.6 181 40.3
CSS0040729 Camellia sinensis var. sinensis HOM05D004493 ORTHO05D005117 6.7e-18 96.3 134 44.0
Peaxi162Scf00186g01613 Petunia axillaris HOM05D004493 ORTHO05D005117 6.9e-15 86.3 102 44.1
MSTRG.12812 Avicennia marina HOM05D004493 ORTHO05D005117 2.0e-14 84.7 133 39.1
ATR0906G002 Amborella trichopoda HOM05D004493 ORTHO05D005117 1.0e-13 82.4 101 44.6
SEGI_11629 Sequoiadendron giganteum HOM05D004493 ORTHO05D005117 1.3e-13 82.0 152 34.9
FAN11G3847 Fragaria x ananassa HOM05D004493 ORTHO05D005117 3.8e-13 80.5 136 36.8
SEGI_28014 Sequoiadendron giganteum HOM05D004493 ORTHO05D005117 1.2e-11 75.5 113 35.4
CSS0001625 Camellia sinensis var. sinensis HOM05D004493 ORTHO05D005117 2.8e-08 64.3 118 33.9
QL04p013873 Quercus lobata HOM05D004493 ORTHO05D005117 3.1e-07 60.8 72 45.8
SMO167G0064 Selaginella moellendorffii HOM05D004493 ORTHO05D005117 3.1e-07 60.8 166 30.7
FAN14G4108 Fragaria x ananassa HOM05D004493 ORTHO05D005117 1.6e-06 58.5 65 44.6
FAN26G0295 Fragaria x ananassa HOM05D000290 ORTHO05D006676 2.0e-06 58.2 65 44.6
FAN03G1805 Fragaria x ananassa HOM05D004493 ORTHO05D005117 2.6e-06 57.8 57 54.4


User provided reference genes

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