Interactive Phylogenetics Module

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If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Eucgr.J01637 Eucalyptus grandis HOM05D003263 ORTHO05D004801 2.5e-121 438.7 213 100.0
Eucgr.J01621 Eucalyptus grandis HOM05D003263 ORTHO05D004801 9.6e-105 383.6 224 86.2
arahy.Tifrunner.gnm1.ann1.AUXW6G Arachis hypogaea HOM05D003263 ORTHO05D004801 4.2e-92 341.7 221 77.8
Rhsim08G0019700 Rhododendron simsii HOM05D003263 ORTHO05D004801 1.2e-91 340.1 224 78.6
vmacro18524 Vaccinium macrocarpon HOM05D003263 ORTHO05D004801 2.1e-91 339.3 225 78.7
BraA04t16733Z Brassica rapa HOM05D003263 ORTHO05D004801 3.5e-91 338.6 225 77.3
THA.LOC104822242 Tarenaya hassleriana HOM05D003263 ORTHO05D004801 6.0e-91 337.8 225 77.8
THA.LOC104805635 Tarenaya hassleriana HOM05D003263 ORTHO05D004801 7.9e-91 337.4 223 77.6
BcaB06g27086 Brassica carinata HOM05D003263 ORTHO05D004801 1.0e-90 337.0 225 76.9
A04p10660 Brassica napus HOM05D003263 ORTHO05D004801 1.0e-90 337.0 225 76.9
Prupe.3G165400 Prunus persica HOM05D003263 ORTHO05D004801 1.0e-90 337.0 226 76.5
Lsat_1_v5_gn_3_63961 Lactuca sativa HOM05D003263 ORTHO05D004801 1.3e-90 336.7 222 77.5
Cpa.g.sc116.77 Carica papaya HOM05D003263 ORTHO05D004801 1.8e-90 336.3 224 76.8
CiPaw.03G074100 Carya illinoinensis HOM05D003263 ORTHO05D004801 1.8e-90 336.3 226 76.1
MD17G1267300 Malus domestica HOM05D003263 ORTHO05D004801 1.8e-90 336.3 227 76.2
MD09G1268900 Malus domestica HOM05D003263 ORTHO05D004801 2.3e-90 335.9 227 76.2
CANSAT56G4352 Cannabis sativa HOM05D003263 ORTHO05D004801 3.0e-90 335.5 227 75.8
Dinv19049 Davidia involucrata HOM05D003263 ORTHO05D004801 3.0e-90 335.5 227 76.7
PGR042G3530 Punica granatum HOM05D003263 ORTHO05D004801 3.0e-90 335.5 226 77.9
Actinidia35722 Actinidia chinensis HOM05D003263 ORTHO05D004801 5.1e-90 334.7 225 77.3
CSS0018871 Camellia sinensis var. sinensis HOM05D003263 ORTHO05D004801 5.1e-90 334.7 223 77.6
HanXRQChr07g0191741 Helianthus annuus HOM05D003263 ORTHO05D004801 5.1e-90 334.7 222 75.7
Manes.02G078500 Manihot esculenta HOM05D003263 ORTHO05D004801 6.7e-90 334.3 224 76.8
BcaC02g09578 Brassica carinata HOM05D003263 ORTHO05D004801 8.7e-90 334.0 225 76.4
BolC4t26009H Brassica oleracea HOM05D003263 ORTHO05D004801 8.7e-90 334.0 225 76.4
PGSC0003DMG400013309 Solanum tuberosum HOM05D003263 ORTHO05D004801 8.7e-90 334.0 224 76.8
Ca_17086_v3 Cicer arietinum L. HOM05D003263 ORTHO05D004801 1.1e-89 333.6 224 74.6
Haze_14285 Corylus avellana HOM05D003263 ORTHO05D004801 1.1e-89 333.6 219 77.6
Glyma.11G214800 Glycine max HOM05D003263 ORTHO05D004801 1.1e-89 333.6 225 76.4
Nitab4.5_0006562g0010 Nicotiana tabacum HOM05D003263 ORTHO05D004801 1.1e-89 333.6 221 77.4
Nitab4.5_0011135g0010 Nicotiana tabacum HOM05D003263 ORTHO05D004801 1.1e-89 333.6 221 77.4
C04p44380 Brassica napus HOM05D003263 ORTHO05D004801 1.9e-89 332.8 225 76.0
CAN.G222.62 Capsicum annuum HOM05D003263 ORTHO05D004801 1.9e-89 332.8 221 76.5
Sopen11g006260 Solanum pennellii HOM05D003263 ORTHO05D004801 1.9e-89 332.8 224 76.3
Manes.01G120700 Manihot esculenta HOM05D003263 ORTHO05D004801 2.5e-89 332.4 224 76.3
Solyc11g011470.2 Solanum lycopersicum HOM05D003263 ORTHO05D004801 2.5e-89 332.4 225 76.0
SGA_v2.0_scaffold108G30966 Striga asiatica HOM05D003263 ORTHO05D004801 2.5e-89 332.4 222 76.6
Aa31LG9G17530 Aethionema arabicum HOM05D003263 ORTHO05D004801 3.3e-89 332.0 224 77.2
Thhalv10027640m.g Eutrema salsugineum HOM05D003263 ORTHO05D004801 3.3e-89 332.0 225 76.0
FAN23G0774 Fragaria x ananassa HOM05D003263 ORTHO05D004801 3.3e-89 332.0 219 77.2
FAN26G0816 Fragaria x ananassa HOM05D003263 ORTHO05D004801 3.3e-89 332.0 219 77.2
RcHm_v2.0_Chr3g0491991 Rosa chinensis HOM05D003263 ORTHO05D004801 3.3e-89 332.0 225 75.6
AT5G37510 Arabidopsis thaliana HOM05D003263 ORTHO05D004801 4.3e-89 331.6 224 75.9
Atru.chr1.2038 Acer truncatum HOM05D003263 ORTHO05D004801 5.6e-89 331.3 224 76.8
Cfa007786 Carpinus fangiana HOM05D003263 ORTHO05D004801 5.6e-89 331.3 220 75.9
AL7G46270 Arabidopsis lyrata HOM05D003263 ORTHO05D004801 7.4e-89 330.9 224 75.9
Lj6g0025109 Lotus japonicus HOM05D003263 ORTHO05D004801 7.4e-89 330.9 223 75.3
CARHR215400 Cardamine hirsuta HOM05D003263 ORTHO05D004801 9.6e-89 330.5 224 75.4
Potri.017G136133 Populus trichocarpa HOM05D003263 ORTHO05D004801 9.6e-89 330.5 224 76.3
QL02p059434 Quercus lobata HOM05D003263 ORTHO05D004801 9.6e-89 330.5 224 74.1
TWI74G0116 Tripterygium wilfordii HOM05D003263 ORTHO05D004801 9.6e-89 330.5 225 76.0
Glyma.18G041700 Glycine max HOM05D003263 ORTHO05D004801 1.6e-88 329.7 226 75.7
Ciclev10019002m.g Citrus clementina HOM05D003263 ORTHO05D004801 2.1e-88 329.3 224 75.4
Migut.H02232 Erythranthe guttata HOM05D003263 ORTHO05D004801 2.1e-88 329.3 222 76.6
Carub.0007s3268 Capsella rubella HOM05D003263 ORTHO05D004801 2.8e-88 328.9 224 75.0
HanXRQChr14g0444641 Helianthus annuus HOM05D003263 ORTHO05D004801 4.8e-88 328.2 222 77.0
TWI77G0544 Tripterygium wilfordii HOM05D003263 ORTHO05D004801 4.8e-88 328.2 225 73.8
VMungo1383G2082 Vigna mungo HOM05D003263 ORTHO05D004801 4.8e-88 328.2 224 75.0
Potri.004G082800 Populus trichocarpa HOM05D003263 ORTHO05D004801 6.2e-88 327.8 219 76.3
TPR.G23206 Trifolium pratense HOM05D003263 ORTHO05D004801 6.2e-88 327.8 223 73.5
MSTRG.15657 Avicennia marina HOM05D003263 ORTHO05D004801 8.1e-88 327.4 223 75.3
Phvul.001G229000 Phaseolus vulgaris HOM05D003263 ORTHO05D004801 1.4e-87 326.6 224 74.6
TAR629G0765 Trochodendron aralioides HOM05D003263 ORTHO05D004801 1.4e-87 326.6 226 76.1
Migut.K00926 Erythranthe guttata HOM05D003263 ORTHO05D004801 2.4e-87 325.9 222 76.1
Gorai.001G197100 Gossypium raimondii HOM05D003263 ORTHO05D004801 2.4e-87 325.9 226 73.9
Medtr3g065130 Medicago truncatula HOM05D003263 ORTHO05D004801 2.4e-87 325.9 224 74.1
Peaxi162Scf00464g00325 Petunia axillaris HOM05D003263 ORTHO05D004801 2.4e-87 325.9 220 75.5
AL1G43210 Arabidopsis lyrata HOM05D003263 ORTHO05D004801 5.3e-87 324.7 223 75.3
MSTRG.3699 Avicennia marina HOM05D003263 ORTHO05D004801 5.3e-87 324.7 217 76.0
FvH4_1g30070 Fragaria vesca HOM05D003263 ORTHO05D004801 5.3e-87 324.7 212 77.4
Oeu062704.1 Olea europaea HOM05D003263 ORTHO05D004801 6.9e-87 324.3 222 75.7
Aa31LG9G17520 Aethionema arabicum HOM05D003263 ORTHO05D004801 9.0e-87 323.9 230 74.8
Psat5g119880 Pisum sativum HOM05D003263 ORTHO05D004801 1.2e-86 323.6 225 72.9
Duzib138G0925 Durio zibethinus HOM05D003263 ORTHO05D004801 1.5e-86 323.2 225 73.8
Lalb_Chr15g0085021 Lupinus albus HOM05D003263 ORTHO05D004801 2.0e-86 322.8 222 73.4
SGA_v2.0_scaffold2G00947 Striga asiatica HOM05D003263 ORTHO05D004801 2.0e-86 322.8 222 74.3
Thecc.04G063600 Theobroma cacao HOM05D003263 ORTHO05D004801 2.0e-86 322.8 225 74.2
Thecc.K0008100 Theobroma cacao HOM05D003263 ORTHO05D004801 2.0e-86 322.8 225 74.2
ClCG05G010610 Citrullus lanatus HOM05D003263 ORTHO05D004801 3.4e-86 322.0 225 72.9
EL10Ac2g03207 Beta vulgaris HOM05D003263 ORTHO05D004801 4.5e-86 321.6 226 73.9
Gohir.D07G183900 Gossypium hirsutum HOM05D003263 ORTHO05D004801 4.5e-86 321.6 225 73.8
Gorai.001G204300 Gossypium raimondii HOM05D003263 ORTHO05D004801 4.5e-86 321.6 225 73.8
CsaV3_3G017880 Cucumis sativus L. HOM05D003263 ORTHO05D004801 5.8e-86 321.2 227 72.2
ECA238G3173 Erigeron canadensis HOM05D003263 ORTHO05D004801 5.8e-86 321.2 223 73.5
PSO017G4553 Papaver somniferum HOM05D003263 ORTHO05D004801 5.8e-86 321.2 233 72.1
PSO478G1645 Papaver somniferum HOM05D003263 ORTHO05D004801 5.8e-86 321.2 233 72.1
arahy.Tifrunner.gnm1.ann1.ZZ0CH2 Arachis hypogaea HOM05D003263 ORTHO05D004801 7.6e-86 320.9 256 66.8
MELO3C020331.2 Cucumis melo HOM05D003263 ORTHO05D004801 7.6e-86 320.9 227 72.2
Duzib133G1400 Durio zibethinus HOM05D003263 ORTHO05D004801 1.3e-85 320.1 225 73.8
CDE05G1041 Ceratophyllum demersum HOM05D003263 ORTHO05D004801 1.7e-85 319.7 208 77.9
CDE05G1320 Ceratophyllum demersum HOM05D003263 ORTHO05D004801 1.7e-85 319.7 189 82.5
Nn4g24447 Nelumbo nucifera HOM05D003263 ORTHO05D004801 1.7e-85 319.7 229 73.8
SalBow5G3125 Salvia bowleyana HOM05D003263 ORTHO05D004801 2.2e-85 319.3 223 74.9
Sed0005557 Sechium edule HOM05D003263 ORTHO05D004801 2.9e-85 318.9 223 73.1
Gohir.A07G176600 Gossypium hirsutum HOM05D003263 ORTHO05D004801 3.8e-85 318.5 225 72.9
Sed0016313 Sechium edule HOM05D003263 ORTHO05D004801 6.5e-85 317.8 218 72.9
Ah.10g032470 Amaranthus hybridus HOM05D003263 ORTHO05D004801 8.4e-85 317.4 223 72.2
Ah.10g032480 Amaranthus hybridus HOM05D003263 ORTHO05D004801 8.4e-85 317.4 223 72.2
COL.COLO4_13315 Corchorus olitorius HOM05D003263 ORTHO05D004801 3.2e-84 315.5 224 72.8
Lalb_Chr18g0053541 Lupinus albus HOM05D003263 ORTHO05D004801 3.2e-84 315.5 223 72.2
Aqoxy3G04075 Aquilegia oxysepala HOM05D003263 ORTHO05D004801 4.2e-84 315.1 198 78.3
MBI19_g09384_MAGBIO Magnolia biondii HOM05D003263 ORTHO05D004801 5.5e-84 314.7 220 72.7
DCAR_014159 Daucus carota HOM05D003263 ORTHO05D004801 1.2e-83 313.5 224 73.7
Sc14g0006900 Simmondsia chinensis HOM05D003263 ORTHO05D004801 6.0e-83 311.2 162 90.7
unitig_748.g8633 Utricularia gibba HOM05D003263 ORTHO05D004801 6.0e-83 311.2 228 71.5
FAN19G0316 Fragaria x ananassa HOM05D003263 ORTHO05D004801 1.8e-82 309.7 172 86.0
HPP92_020298 Vanilla planifolia HOM05D003263 ORTHO05D004801 3.9e-82 308.5 217 73.7
Oeu030292.1 Olea europaea HOM05D003263 ORTHO05D004801 5.1e-82 308.1 254 66.1
Hund13092 Selenicereus undatus HOM05D003263 ORTHO05D004801 5.1e-82 308.1 173 85.5
AUR62037782 Chenopodium quinoa HOM05D003263 ORTHO05D004801 6.7e-82 307.8 225 71.6
SHI30113 Sapria himalayana HOM05D003263 ORTHO05D004801 3.3e-81 305.4 220 74.1
Zm00001eb216210 Zea mays HOM05D003263 ORTHO05D004801 2.8e-80 302.4 217 72.4
Os03g0713400 Oryza sativa ssp. japonica HOM05D003263 ORTHO05D004801 2.4e-79 299.3 186 80.6
Zm00001eb055050 Zea mays HOM05D003263 ORTHO05D004801 5.3e-79 298.1 185 79.5
ATR0118G003 Amborella trichopoda HOM05D003263 ORTHO05D004801 2.2e-77 292.7 184 78.8
Dinv28178 Davidia involucrata HOM05D003263 ORTHO05D004801 1.9e-76 289.7 203 74.4
Mapoly0153s0030 Marchantia polymorpha HOM05D003263 ORTHO05D004801 2.4e-71 272.7 170 77.1
Pp3c1_34100 Physcomitrium patens HOM05D003263 ORTHO05D004801 1.5e-70 270.0 150 84.0
Pp3c1_34110 Physcomitrium patens HOM05D003263 ORTHO05D004801 1.5e-70 270.0 150 84.0
Pp3c1_34140 Physcomitrium patens HOM05D003263 ORTHO05D004801 1.5e-70 270.0 150 84.0
SMO331G0029 Selaginella moellendorffii HOM05D003263 ORTHO05D004801 3.4e-70 268.9 157 79.0
Pp3c19_19270 Physcomitrium patens HOM05D003263 ORTHO05D004801 4.5e-70 268.5 211 67.3
Gohir.A07G170100 Gossypium hirsutum HOM05D003263 ORTHO05D004801 3.8e-69 265.4 135 92.6
Gohir.D07G176300 Gossypium hirsutum HOM05D003263 ORTHO05D004801 3.8e-69 265.4 135 92.6
Cc07_g13220 Coffea canephora HOM05D003263 ORTHO05D004801 8.5e-69 264.2 135 92.6
AagrBONN_evm.TU.Sc2ySwM_228.2430 Anthoceros agrestis HOM05D003263 ORTHO05D004801 2.5e-68 262.7 153 79.7
GSVIVG01030914001 Vitis vinifera HOM05D003263 ORTHO05D004801 2.5e-68 262.7 135 91.9
arahy.Tifrunner.gnm1.ann1.RIP12T Arachis hypogaea HOM05D003263 ORTHO05D004801 5.5e-68 261.5 137 90.5
CBR_g6354 Chara braunii HOM05D003263 ORTHO05D004801 5.5e-68 261.5 152 78.9
arahy.Tifrunner.gnm1.ann1.5H82NF Arachis hypogaea HOM05D003263 ORTHO05D004801 1.6e-67 260.0 135 91.1
AUR62042225 Chenopodium quinoa HOM05D003263 ORTHO05D004801 1.1e-65 253.8 224 62.5
Cre12.g535950 Chlamydomonas reinhardtii HOM05D003263 ORTHO05D004801 4.3e-65 251.9 150 78.0
PRCOL_00000346 Prasinoderma coloniale HOM05D003263 ORTHO05D004801 1.8e-63 246.5 146 78.8
MCO08G340 Micromonas commoda HOM05D003263 ORTHO05D004801 4.1e-63 245.4 150 75.3
arahy.Tifrunner.gnm1.ann1.VKQW11 Arachis hypogaea HOM05D003263 ORTHO05D004801 2.2e-61 239.6 126 90.5
SEGI_21193 Sequoiadendron giganteum HOM05D003263 ORTHO05D004801 2.0e-57 226.5 157 72.0
arahy.Tifrunner.gnm1.ann1.SN393R Arachis hypogaea HOM05D003263 ORTHO05D004801 4.1e-55 218.8 114 90.4
Cfa025667 Carpinus fangiana HOM05D003263 ORTHO05D004801 4.5e-54 215.3 143 69.9
Haze_26802 Corylus avellana HOM05D003263 ORTHO05D004801 6.5e-53 211.5 153 63.4
Actinidia28797 Actinidia chinensis HOM05D003263 ORTHO05D004801 1.0e-50 204.1 157 70.7
SEGI_05320 Sequoiadendron giganteum HOM05D003263 ORTHO05D004801 5.2e-42 175.3 117 72.6
SpUN1596_0010 Schrenkiella parvula HOM05D003263 ORTHO05D004801 1.8e-39 166.8 82 95.1
TAR371G0371 Trochodendron aralioides HOM05D003263 ORTHO05D004801 1.8e-39 166.8 141 65.2
SEGI_04560 Sequoiadendron giganteum HOM05D003263 ORTHO05D004801 1.6e-38 163.7 176 53.4
HanXRQChr17g0559491 Helianthus annuus HOM05D003263 ORTHO05D004801 3.5e-38 162.5 139 65.5
QL04p097132 Quercus lobata HOM05D003263 ORTHO05D000041 5.9e-30 135.2 93 69.9
arahy.Tifrunner.gnm1.ann1.Z93KCA Arachis hypogaea HOM05D003263 ORTHO05D004801 1.2e-27 127.5 60 95.0
Cc04_g05630 Coffea canephora HOM05D003263 ORTHO05D004801 1.5e-25 120.6 128 57.8
MD16G1264400 Malus domestica HOM05D003263 ORTHO05D004801 1.2e-22 110.9 61 83.6
Migut.M00197 Erythranthe guttata HOM05D003263 ORTHO05D004801 2.3e-21 106.7 76 71.1
CSS0022568 Camellia sinensis var. sinensis HOM05D003263 ORTHO05D004801 8.6e-21 104.8 124 55.6
CBR_g26339 Chara braunii HOM05D004987 ORTHO05D005960 6.6e-13 78.6 161 26.1
QL08p053439 Quercus lobata HOM05D003263 ORTHO05D004801 8.6e-13 78.2 50 70.0
SEGI_40032 Sequoiadendron giganteum HOM05D003263 ORTHO05D024792 4.7e-11 72.4 42 81.0
Cc00_g06720 Coffea canephora HOM05D003263 ORTHO05D004801 4.0e-10 69.3 38 86.8


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