Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Eucgr.J01514 Eucalyptus grandis HOM05D003134 ORTHO05D003500 7.5e-70 267.3 159 100.0
Nn3g17932 Nelumbo nucifera HOM05D003134 ORTHO05D003500 1.2e-27 127.1 155 52.3
Dinv34801 Davidia involucrata HOM05D003134 ORTHO05D003500 1.0e-26 124.0 155 57.4
ClCG11G007810 Citrullus lanatus HOM05D003134 ORTHO05D003500 1.3e-26 123.6 163 50.3
Cpa.g.sc170.42 Carica papaya HOM05D003134 ORTHO05D003500 8.6e-26 120.9 161 48.4
PGR042G1462 Punica granatum HOM05D003134 ORTHO05D003500 8.6e-26 120.9 154 50.6
Hma1.2p1_1109F.1_g258190 Hydrangea macrophylla HOM05D003134 ORTHO05D003500 2.5e-25 119.4 154 51.3
Dinv33962 Davidia involucrata HOM05D003134 ORTHO05D003500 7.3e-25 117.9 154 50.0
MELO3C008147.2 Cucumis melo HOM05D003134 ORTHO05D003500 1.2e-24 117.1 164 48.2
CANSAT78G1475 Cannabis sativa HOM05D003134 ORTHO05D003500 1.6e-24 116.7 161 49.7
Haze_14180 Corylus avellana HOM05D003134 ORTHO05D003500 1.6e-24 116.7 165 50.3
FAN03G2307 Fragaria x ananassa HOM05D003134 ORTHO05D003500 2.1e-24 116.3 156 51.3
CSS0042149 Camellia sinensis var. sinensis HOM05D003134 ORTHO05D003500 2.8e-24 115.9 159 51.6
CsaV3_2G033780 Cucumis sativus L. HOM05D003134 ORTHO05D003500 3.6e-24 115.5 166 48.2
Sed0007756 Sechium edule HOM05D003134 ORTHO05D003500 4.7e-24 115.2 157 47.8
Cfa007900 Carpinus fangiana HOM05D003134 ORTHO05D003500 1.4e-23 113.6 164 48.2
Lj4P188T25 Lonicera japonica HOM05D003134 ORTHO05D003500 1.4e-23 113.6 153 51.0
SalBow5G3107 Salvia bowleyana HOM05D003134 ORTHO05D003500 2.4e-23 112.8 155 50.3
SalBow5G4218 Salvia bowleyana HOM05D003134 ORTHO05D003500 2.4e-23 112.8 155 50.3
Ca_08085_v3 Cicer arietinum L. HOM05D003134 ORTHO05D003500 4.0e-23 112.1 154 45.5
MD17G1247700 Malus domestica HOM05D003134 ORTHO05D003500 5.2e-23 111.7 159 47.2
Solyc02g086260.1 Solanum lycopersicum HOM05D003134 ORTHO05D003500 5.2e-23 111.7 158 48.7
FAN14G3652 Fragaria x ananassa HOM05D003134 ORTHO05D003500 6.8e-23 111.3 156 49.4
FAN28G2684 Fragaria x ananassa HOM05D003134 ORTHO05D003500 1.5e-22 110.2 156 56.4
TPR.G36596 Trifolium pratense HOM05D003134 ORTHO05D003500 1.5e-22 110.2 159 45.3
FAN10G2348 Fragaria x ananassa HOM05D003134 ORTHO05D003500 2.0e-22 109.8 156 51.9
Prupe.3G146400 Prunus persica HOM05D003134 ORTHO05D003500 3.4e-22 109.0 159 45.3
Cc07_g08620 Coffea canephora HOM05D003134 ORTHO05D003500 4.4e-22 108.6 160 50.0
Sed0003377 Sechium edule HOM05D003134 ORTHO05D003500 4.4e-22 108.6 155 47.7
Rhsim08G0083300 Rhododendron simsii HOM05D003134 ORTHO05D003500 5.8e-22 108.2 156 47.4
TAR374G1690 Trochodendron aralioides HOM05D003134 ORTHO05D003500 5.8e-22 108.2 159 47.8
CiPaw.03G063500 Carya illinoinensis HOM05D003134 ORTHO05D003500 9.9e-22 107.5 172 44.8
Psat3g098080 Pisum sativum HOM05D003134 ORTHO05D003500 1.3e-21 107.1 157 45.2
FAN01G0579 Fragaria x ananassa HOM05D003134 ORTHO05D003500 2.2e-21 106.3 156 48.7
FAN10G3294 Fragaria x ananassa HOM05D000266 ORTHO05D000765 2.9e-21 105.9 156 51.3
Atru.chr1.1630 Acer truncatum HOM05D003134 ORTHO05D003500 4.9e-21 105.1 154 51.3
QL02p050634 Quercus lobata HOM05D003134 ORTHO05D003500 4.9e-21 105.1 169 43.8
FAN02G1640 Fragaria x ananassa HOM05D003134 ORTHO05D003500 6.4e-21 104.8 156 47.4
Glyma.18G294900 Glycine max HOM05D003134 ORTHO05D003500 6.4e-21 104.8 157 48.4
Ciclev10013038m.g Citrus clementina HOM05D003134 ORTHO05D003500 1.4e-20 103.6 153 48.4
Glyma.02G088600 Glycine max HOM05D003134 ORTHO05D003500 1.4e-20 103.6 160 47.5
Manes.02G070500 Manihot esculenta HOM05D003134 ORTHO05D003500 1.4e-20 103.6 155 51.6
SGA_v2.0_scaffold49G18114 Striga asiatica HOM05D003134 ORTHO05D003500 2.4e-20 102.8 153 46.4
Actinidia17642 Actinidia chinensis HOM05D003134 ORTHO05D003500 5.4e-20 101.7 154 47.4
Oeu039736.1 Olea europaea HOM05D003134 ORTHO05D003500 5.4e-20 101.7 159 46.5
FAN23G1965 Fragaria x ananassa HOM05D003134 ORTHO05D003500 7.1e-20 101.3 156 48.1
QL02p049588 Quercus lobata HOM05D003134 ORTHO05D003500 9.3e-20 100.9 169 44.4
TAR433G0003 Trochodendron aralioides HOM05D003134 ORTHO05D003500 9.3e-20 100.9 153 45.1
Oeu012575.1 Olea europaea HOM05D003134 ORTHO05D003500 1.6e-19 100.1 159 45.3
Migut.H00233 Erythranthe guttata HOM05D003134 ORTHO05D003500 2.7e-19 99.4 166 44.6
Phvul.008G007800 Phaseolus vulgaris HOM05D003134 ORTHO05D003500 3.5e-19 99.0 164 47.6
Nitab4.5_0000625g0110 Nicotiana tabacum HOM05D003134 ORTHO05D003500 4.6e-19 98.6 163 45.4
VMungo1383G0351 Vigna mungo HOM05D003134 ORTHO05D003500 4.6e-19 98.6 165 47.3
Manes.01G112200 Manihot esculenta HOM05D003134 ORTHO05D003500 6.0e-19 98.2 156 45.5
Oeu012577.1 Olea europaea HOM05D003134 ORTHO05D003500 6.0e-19 98.2 159 45.3
FAN16G3541 Fragaria x ananassa HOM05D003134 ORTHO05D003500 1.3e-18 97.1 156 53.2
THA.LOC104823851 Tarenaya hassleriana HOM05D003134 ORTHO05D003500 1.7e-18 96.7 157 44.6
Medtr7g082520 Medicago truncatula HOM05D003134 ORTHO05D003500 2.3e-18 96.3 158 41.1
Sc10g0001080 Simmondsia chinensis HOM05D003134 ORTHO05D003500 2.3e-18 96.3 155 45.8
Ah.16g101650 Amaranthus hybridus HOM05D003134 ORTHO05D003500 3.0e-18 95.9 162 43.8
Lsat_1_v5_gn_3_80541 Lactuca sativa HOM05D003134 ORTHO05D003500 3.9e-18 95.5 157 45.2
FvH4_7g03610 Fragaria vesca HOM05D003134 ORTHO05D003500 1.1e-17 94.0 157 49.0
FAN06G4960 Fragaria x ananassa HOM05D003134 ORTHO05D003500 1.1e-17 94.0 157 49.0
Migut.L00500 Erythranthe guttata HOM05D003134 ORTHO05D003500 1.5e-17 93.6 166 46.4
AUR62023283 Chenopodium quinoa HOM05D003134 ORTHO05D003500 1.9e-17 93.2 165 43.6
RcHm_v2.0_Chr1g0326241 Rosa chinensis HOM05D003134 ORTHO05D003500 1.9e-17 93.2 166 42.8
Solyc03g034300.1 Solanum lycopersicum HOM05D003134 ORTHO05D003500 1.9e-17 93.2 155 43.2
AUR62009019 Chenopodium quinoa HOM05D003134 ORTHO05D003500 2.5e-17 92.8 165 47.3
SalBow3G2725 Salvia bowleyana HOM05D003134 ORTHO05D003500 2.5e-17 92.8 155 47.1
unitig_0.g841 Utricularia gibba HOM05D003134 ORTHO05D003500 2.5e-17 92.8 151 43.0
PGSC0003DMG400002449 Solanum tuberosum HOM05D003134 ORTHO05D003500 3.3e-17 92.4 168 41.1
PGSC0003DMG400024380 Solanum tuberosum HOM05D003134 ORTHO05D003500 3.3e-17 92.4 168 41.1
Nitab4.5_0015828g0010 Nicotiana tabacum HOM05D003134 ORTHO05D003500 7.3e-17 91.3 163 43.6
PGR004G0132 Punica granatum HOM05D003134 ORTHO05D003500 7.3e-17 91.3 160 43.8
Lalb_Chr10g0091341 Lupinus albus HOM05D003134 ORTHO05D003500 1.3e-16 90.5 160 42.5
Sabra04G0066000 Salix brachista HOM05D003134 ORTHO05D003500 1.3e-16 90.5 155 43.2
Aa31LG2G3400 Aethionema arabicum HOM05D003134 ORTHO05D003500 1.6e-16 90.1 160 48.8
HanXRQChr12g0375681 Helianthus annuus HOM05D003134 ORTHO05D003500 2.1e-16 89.7 159 51.6
Sopen03g007090 Solanum pennellii HOM05D003134 ORTHO05D003500 2.1e-16 89.7 158 41.8
MBI16_g37123_MAGBIO Magnolia biondii HOM05D003134 ORTHO05D003500 2.8e-16 89.4 155 43.2
DCAR_021449 Daucus carota HOM05D003134 ORTHO05D003500 3.6e-16 89.0 156 42.9
FAN22G2289 Fragaria x ananassa HOM05D003134 ORTHO05D003500 6.2e-16 88.2 156 48.1
Prupe.1G315800 Prunus persica HOM05D003134 ORTHO05D003500 8.1e-16 87.8 156 45.5
EL10Ac2g04546 Beta vulgaris HOM05D003134 ORTHO05D003500 1.4e-15 87.0 171 41.5
Lj1g0014230 Lotus japonicus HOM05D003134 ORTHO05D003500 1.8e-15 86.7 159 42.1
Nitab4.5_0000753g0120 Nicotiana tabacum HOM05D003134 ORTHO05D003500 3.1e-15 85.9 140 45.7
THA.LOC104805579 Tarenaya hassleriana HOM05D003134 ORTHO05D003500 3.1e-15 85.9 164 40.2
TAR622G0779 Trochodendron aralioides HOM05D003134 ORTHO05D003500 1.2e-14 84.0 159 40.9
TAR622G1269 Trochodendron aralioides HOM05D003134 ORTHO05D003500 1.2e-14 84.0 159 40.9
Nn4g23933 Nelumbo nucifera HOM05D003134 ORTHO05D003500 1.5e-14 83.6 156 39.7
AL2G25140 Arabidopsis lyrata HOM05D003134 ORTHO05D003500 2.6e-14 82.8 156 41.0
FAN22G2030 Fragaria x ananassa HOM05D003134 ORTHO05D003500 3.4e-14 82.4 79 62.0
Sp7g03820 Schrenkiella parvula HOM05D003134 ORTHO05D003500 4.4e-14 82.0 159 44.7
PGSC0003DMG400026385 Solanum tuberosum HOM05D001447 ORTHO05D005923 5.8e-14 81.6 82 59.8
Potri.017G117866 Populus trichocarpa HOM05D003134 ORTHO05D003500 7.6e-14 81.3 156 48.1
Peaxi162Scf00394g00095 Petunia axillaris HOM05D003134 ORTHO05D003500 9.9e-14 80.9 141 44.7
FAN13G0633 Fragaria x ananassa HOM05D003134 ORTHO05D003500 1.3e-13 80.5 82 61.0
Peaxi162Scf00104g00142 Petunia axillaris HOM05D003134 ORTHO05D003500 1.3e-13 80.5 159 37.7
Sp5g21880 Schrenkiella parvula HOM05D003134 ORTHO05D003500 3.8e-13 79.0 158 43.0
CiPaw.05G241000 Carya illinoinensis HOM05D003134 ORTHO05D003500 4.9e-13 78.6 160 39.4
FvH4_4g26860 Fragaria vesca HOM05D003134 ORTHO05D003500 6.4e-13 78.2 153 42.5
Thhalv10019248m.g Eutrema salsugineum HOM05D003134 ORTHO05D003500 8.4e-13 77.8 158 41.8
CiPaw.04G043700 Carya illinoinensis HOM05D003134 ORTHO05D003500 1.4e-12 77.0 165 37.6
MD16G1038900 Malus domestica HOM05D003134 ORTHO05D003500 1.4e-12 77.0 155 43.2
Oeu030792.1 Olea europaea HOM05D000260 ORTHO05D000318 1.4e-12 77.0 154 42.2
FAN12G3405 Fragaria x ananassa HOM05D003134 ORTHO05D003500 1.9e-12 76.6 152 41.4
Oeu008433.1 Olea europaea HOM05D003134 ORTHO05D003500 1.9e-12 76.6 162 43.2
BcaC08g46122 Brassica carinata HOM05D003134 ORTHO05D003500 3.2e-12 75.9 151 40.4
Gohir.D11G171400 Gossypium hirsutum HOM05D003134 ORTHO05D003500 3.2e-12 75.9 165 36.4
Gorai.007G183800 Gossypium raimondii HOM05D003134 ORTHO05D003500 3.2e-12 75.9 165 36.4
C06p43260 Brassica napus HOM05D003134 ORTHO05D003500 4.2e-12 75.5 151 41.7
Cpa.g.sc65.57 Carica papaya HOM05D003134 ORTHO05D003500 4.2e-12 75.5 162 40.7
FAN22G0900 Fragaria x ananassa HOM05D003134 ORTHO05D003500 4.2e-12 75.5 153 41.2
Ah.10g037670 Amaranthus hybridus HOM05D003134 ORTHO05D003500 5.4e-12 75.1 165 44.2
BcaB03g15220 Brassica carinata HOM05D003134 ORTHO05D003500 5.4e-12 75.1 157 41.4
Duzib133G1507 Durio zibethinus HOM05D003134 ORTHO05D003500 5.4e-12 75.1 176 35.8
BcaC04g18897 Brassica carinata HOM05D003134 ORTHO05D003500 7.1e-12 74.7 155 38.7
C09p60820 Brassica napus HOM05D003134 ORTHO05D003500 7.1e-12 74.7 155 38.7
BolC9t58922H Brassica oleracea HOM05D003134 ORTHO05D003500 7.1e-12 74.7 155 38.7
BraA07t30998Z Brassica rapa HOM05D003134 ORTHO05D003500 7.1e-12 74.7 155 39.4
Gohir.A11G165400 Gossypium hirsutum HOM05D003134 ORTHO05D003500 7.1e-12 74.7 165 35.8
Potri.004G097200 Populus trichocarpa HOM05D003134 ORTHO05D003500 7.1e-12 74.7 154 44.2
BcaB08g36854 Brassica carinata HOM05D003134 ORTHO05D003500 1.2e-11 73.9 155 37.4
A07p33710 Brassica napus HOM05D003134 ORTHO05D003500 1.2e-11 73.9 157 38.9
CARHR059040 Cardamine hirsuta HOM05D003134 ORTHO05D003500 1.2e-11 73.9 149 40.3
Oeu036853.1 Olea europaea HOM05D003134 ORTHO05D003500 1.2e-11 73.9 162 42.6
Sabra10G0091400 Salix brachista HOM05D003134 ORTHO05D003500 1.2e-11 73.9 163 41.7
AT1G66890 Arabidopsis thaliana HOM05D003134 ORTHO05D003500 1.6e-11 73.6 154 38.3
Carub.0006s1439 Capsella rubella HOM05D003134 ORTHO05D003500 1.6e-11 73.6 157 39.5
RcHm_v2.0_Chr4g0434621 Rosa chinensis HOM05D003134 ORTHO05D003500 2.1e-11 73.2 153 42.5
TWI31G0745 Tripterygium wilfordii HOM05D003134 ORTHO05D003500 2.1e-11 73.2 166 39.8
Lsat_1_v5_gn_2_81120 Lactuca sativa HOM05D003134 ORTHO05D003500 2.7e-11 72.8 157 38.9
THA.LOC104808293 Tarenaya hassleriana HOM05D003134 ORTHO05D003500 2.7e-11 72.8 158 42.4
ClCG01G005860 Citrullus lanatus HOM05D003134 ORTHO05D003500 4.6e-11 72.0 155 40.6
QL01p040313 Quercus lobata HOM05D003134 ORTHO05D003500 4.6e-11 72.0 164 38.4
Duzib138G0856 Durio zibethinus HOM05D003134 ORTHO05D003500 6.0e-11 71.6 168 35.1
A10p22860 Brassica napus HOM05D003134 ORTHO05D003500 1.0e-10 70.9 155 37.4
BraA10t44353Z Brassica rapa HOM05D003134 ORTHO05D003500 1.0e-10 70.9 155 37.4
CsaV3_5G028830 Cucumis sativus L. HOM05D003134 ORTHO05D003500 1.0e-10 70.9 155 40.6
Carub.0002s1311 Capsella rubella HOM05D003134 ORTHO05D003500 1.3e-10 70.5 156 36.5
Manes.06G065600 Manihot esculenta HOM05D003134 ORTHO05D003500 3.0e-10 69.3 161 39.8
FAN07G2257 Fragaria x ananassa HOM05D003134 ORTHO05D003500 3.9e-10 68.9 147 40.8
AT5G16200 Arabidopsis thaliana HOM05D003134 ORTHO05D003500 5.1e-10 68.6 156 37.2
Thhalv10015766m.g Eutrema salsugineum HOM05D003134 ORTHO05D003500 5.1e-10 68.6 148 39.2
AL6G27080 Arabidopsis lyrata HOM05D003134 ORTHO05D003500 6.6e-10 68.2 156 37.2
MELO3C005343.2 Cucumis melo HOM05D003134 ORTHO05D003500 8.7e-10 67.8 158 39.2
Duzib251G0591 Durio zibethinus HOM05D003134 ORTHO05D003500 8.7e-10 67.8 157 37.6
MD13G1036300 Malus domestica HOM05D003134 ORTHO05D003500 1.9e-09 66.6 156 39.1
Sed0004988 Sechium edule HOM05D003134 ORTHO05D003500 1.9e-09 66.6 155 40.0
PSO170G0811 Papaver somniferum HOM05D003134 ORTHO05D003500 2.5e-09 66.2 171 35.7
PSO017G0284 Papaver somniferum HOM05D003134 ORTHO05D003500 4.3e-09 65.5 166 37.3
ECA238G3055 Erigeron canadensis HOM05D003134 ORTHO05D003500 1.3e-08 63.9 162 38.9
Cfa015853 Carpinus fangiana HOM05D003134 ORTHO05D003500 2.1e-08 63.2 157 39.5
Aa31LG11G13410 Aethionema arabicum HOM05D003134 ORTHO05D003500 6.2e-08 61.6 149 34.2
Sp5g23500 Schrenkiella parvula HOM05D003134 ORTHO05D003500 1.4e-07 60.5 156 37.8
Ciclev10016989m.g Citrus clementina HOM05D003134 ORTHO05D003500 2.4e-07 59.7 165 33.9
Thecc.02G223300 Theobroma cacao HOM05D003134 ORTHO05D003500 2.4e-07 59.7 163 40.5
Cfa015852 Carpinus fangiana HOM05D003134 ORTHO05D003500 3.1e-07 59.3 157 38.2
Potri.010G121300 Populus trichocarpa HOM05D003134 ORTHO05D003500 3.1e-07 59.3 155 38.1
Thecc.04G129900 Theobroma cacao HOM05D003134 ORTHO05D003500 4.0e-07 58.9 155 36.1
Cfa015849 Carpinus fangiana HOM05D003134 ORTHO05D003500 6.9e-07 58.2 164 37.2
ATR1125G046 Amborella trichopoda HOM05D003134 ORTHO05D003500 1.5e-06 57.0 168 35.1
COL.COLO4_09360 Corchorus olitorius HOM05D003134 ORTHO05D003500 2.6e-06 56.2 29 93.1
FAN12G3727 Fragaria x ananassa HOM05D003134 ORTHO05D003500 2.6e-06 56.2 90 44.4
Sabra17G0096900 Salix brachista HOM05D003134 ORTHO05D003500 4.5e-06 55.5 126 46.8
CANSAT01G0067 Cannabis sativa HOM05D003134 ORTHO05D003500 7.6e-06 54.7 176 33.5
PGR119G2525 Punica granatum HOM05D003134 ORTHO05D003500 7.6e-06 54.7 162 37.0


User provided reference genes

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