Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Eucgr.J01485 Eucalyptus grandis HOM05D007451 ORTHO05D009399 3.1e-72 275.0 138 100.0
Eucgr.B02066 Eucalyptus grandis HOM05D007451 ORTHO05D009399 1.1e-56 223.4 130 90.8
Eucgr.E03355 Eucalyptus grandis HOM05D007451 ORTHO05D009399 7.2e-37 157.5 96 88.5
Eucgr.C02335 Eucalyptus grandis HOM05D007451 ORTHO05D009399 4.7e-36 154.8 84 96.4
Eucgr.I02284 Eucalyptus grandis HOM05D007451 ORTHO05D009399 1.1e-32 143.7 96 83.3
Nitab4.5_0003044g0100 Nicotiana tabacum HOM05D007451 ORTHO05D009399 2.9e-17 92.4 104 47.1
RcHm_v2.0_Chr5g0014241 Rosa chinensis HOM05D007451 ORTHO05D009399 3.2e-16 89.0 96 49.0
CAN.G65.121 Capsicum annuum HOM05D007451 ORTHO05D009399 4.1e-16 88.6 131 42.0
Manes.17G070400 Manihot esculenta HOM05D007451 ORTHO05D009399 9.2e-16 87.4 105 46.7
Lj1C1189G10 Lonicera japonica HOM05D007451 ORTHO05D009399 1.6e-15 86.7 124 40.3
CSS0045800 Camellia sinensis var. sinensis HOM05D007451 ORTHO05D009399 3.5e-15 85.5 99 45.5
CiPaw.10G091600 Carya illinoinensis HOM05D007451 ORTHO05D009399 6.0e-15 84.7 91 51.6
Hma1.2p1_0286F.1_g114180 Hydrangea macrophylla HOM05D007451 ORTHO05D009399 1.7e-14 83.2 96 45.8
Atru.chr10.1223 Acer truncatum HOM05D005618 ORTHO05D007278 2.3e-14 82.8 101 46.5
GSVIVG01021497001 Vitis vinifera HOM05D007451 ORTHO05D009399 3.0e-14 82.4 96 49.0
Oeu031273.1 Olea europaea HOM05D007451 ORTHO05D009399 3.9e-14 82.0 96 44.8
Rhsim02G0158600 Rhododendron simsii HOM05D007451 ORTHO05D009399 3.9e-14 82.0 96 43.8
Glyma.20G018400 Glycine max HOM05D007451 ORTHO05D009399 6.6e-14 81.3 107 43.9
Psat7g130000 Pisum sativum HOM05D007451 ORTHO05D009399 6.6e-14 81.3 96 45.8
TPR.G38261 Trifolium pratense HOM05D007451 ORTHO05D009399 1.1e-13 80.5 96 44.8
HanXRQChr04g0114281 Helianthus annuus HOM05D007451 ORTHO05D009399 1.9e-13 79.7 108 42.6
Lj4g0011610 Lotus japonicus HOM05D007451 ORTHO05D009399 1.9e-13 79.7 137 36.5
TWI73G0492 Tripterygium wilfordii HOM05D007451 ORTHO05D009399 4.3e-13 78.6 88 48.9
Medtr4g084470 Medicago truncatula HOM05D007451 ORTHO05D009399 5.6e-13 78.2 96 43.8
FAN21G0862 Fragaria x ananassa HOM05D007451 ORTHO05D009399 7.3e-13 77.8 104 44.2
Potri.004G132600 Populus trichocarpa HOM05D007451 ORTHO05D009399 1.2e-12 77.0 105 43.8
Sabra04G0085400 Salix brachista HOM05D007451 ORTHO05D009399 2.8e-12 75.9 96 46.9
FAN11G0575 Fragaria x ananassa HOM05D007451 ORTHO05D009399 3.6e-12 75.5 108 43.5
AL4G30550 Arabidopsis lyrata HOM05D007451 ORTHO05D009399 8.1e-12 74.3 96 39.6
Cc10_g10170 Coffea canephora HOM05D007451 ORTHO05D009399 1.8e-11 73.2 96 40.6
Thhalv10017344m.g Eutrema salsugineum HOM05D007451 ORTHO05D009399 1.8e-11 73.2 96 39.6
Lsat_1_v5_gn_7_28421 Lactuca sativa HOM05D007451 ORTHO05D009399 1.8e-11 73.2 109 39.4
VMungo0251G0908 Vigna mungo HOM05D007451 ORTHO05D009399 1.8e-11 73.2 93 44.1
BcaB02g09525 Brassica carinata HOM05D007451 ORTHO05D009399 2.3e-11 72.8 96 39.6
arahy.Tifrunner.gnm1.ann1.Z8IVUX Arachis hypogaea HOM05D007451 ORTHO05D009399 4.0e-11 72.0 95 42.1
Eucgr.H02213 Eucalyptus grandis HOM05D007451 ORTHO05D009399 4.0e-11 72.0 41 92.7
Sp4g16840 Schrenkiella parvula HOM05D007451 ORTHO05D009399 4.0e-11 72.0 96 39.6
AT2G34580 Arabidopsis thaliana HOM05D007451 ORTHO05D009399 5.2e-11 71.6 96 39.6
BcaC02g11529 Brassica carinata HOM05D007451 ORTHO05D009399 5.2e-11 71.6 96 40.6
BolC4t23021H Brassica oleracea HOM05D005261 ORTHO05D006180 5.2e-11 71.6 96 40.6
Actinidia07699 Actinidia chinensis HOM05D007451 ORTHO05D009399 6.8e-11 71.2 89 43.8
arahy.Tifrunner.gnm1.ann1.ZU2BT9 Arachis hypogaea HOM05D007451 ORTHO05D009399 6.8e-11 71.2 95 42.1
Sc17g0004890 Simmondsia chinensis HOM05D007451 ORTHO05D009399 8.9e-11 70.9 96 41.7
Nitab4.5_0003838g0080 Nicotiana tabacum HOM05D007451 ORTHO05D009399 1.2e-10 70.5 136 36.8
EL10Ac8g19669 Beta vulgaris HOM05D007451 ORTHO05D009399 2.0e-10 69.7 97 44.3
TAR624G0819 Trochodendron aralioides HOM05D007451 ORTHO05D009399 2.6e-10 69.3 109 37.6
CARHR128670 Cardamine hirsuta HOM05D007451 ORTHO05D009399 4.4e-10 68.6 99 37.4
A05p11060 Brassica napus HOM05D005261 ORTHO05D006180 9.8e-10 67.4 96 38.5
BraA05t20052Z Brassica rapa HOM05D007451 ORTHO05D009399 9.8e-10 67.4 96 37.5
EL10Ac8g19670 Beta vulgaris HOM05D007451 ORTHO05D009399 1.3e-09 67.0 97 43.3
ECA246G3905 Erigeron canadensis HOM05D007451 ORTHO05D009399 1.7e-09 66.6 96 37.5
Phvul.002G096800 Phaseolus vulgaris HOM05D007451 ORTHO05D009399 2.2e-09 66.2 93 39.8
Carub.0004s1625 Capsella rubella HOM05D007451 ORTHO05D009399 2.9e-09 65.9 101 38.6
Thecc.06G150100 Theobroma cacao HOM05D007451 ORTHO05D009399 2.4e-08 62.8 95 36.8
Ciclev10018276m.g Citrus clementina HOM05D007451 ORTHO05D009399 5.4e-08 61.6 95 38.9
FAN25G1374 Fragaria x ananassa HOM05D005618 ORTHO05D007278 5.4e-08 61.6 96 37.5
PSO541G4911 Papaver somniferum HOM05D007451 ORTHO05D009399 9.2e-08 60.8 96 36.5
MBI07_g23439_MAGBIO Magnolia biondii HOM05D007451 ORTHO05D009399 1.2e-07 60.5 96 38.5
PSO675G9053 Papaver somniferum HOM05D007451 ORTHO05D009399 1.2e-07 60.5 114 33.3
Aqoxy1G01697 Aquilegia oxysepala HOM05D007451 ORTHO05D009399 1.6e-07 60.1 95 41.1
CSS0015635 Camellia sinensis var. sinensis HOM05D007451 ORTHO05D009399 1.6e-07 60.1 99 35.4
Peaxi162Scf00443g00210 Petunia axillaris HOM05D007451 ORTHO05D009399 8.6e-06 54.3 55 49.1


User provided reference genes

Program Settings