Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Eucgr.J01380 Eucalyptus grandis HOM05D006007 ORTHO05D007518 1.6e-209 732.6 410 100.0
QL02p067640 Quercus lobata HOM05D006007 ORTHO05D007518 1.6e-103 380.6 451 54.3
Cfa007665 Carpinus fangiana HOM05D006007 ORTHO05D007518 3.3e-101 372.9 434 54.8
RcHm_v2.0_Chr2g0165881 Rosa chinensis HOM05D006007 ORTHO05D007518 2.8e-100 369.8 428 56.5
Atru.chr8.458 Acer truncatum HOM05D006007 ORTHO05D007518 1.0e-99 367.9 427 53.6
TWI32G0586 Tripterygium wilfordii HOM05D006007 ORTHO05D007518 2.3e-99 366.7 417 57.1
FAN05G3222 Fragaria x ananassa HOM05D006007 ORTHO05D007518 6.8e-99 365.2 428 53.5
FvH4_6g46910 Fragaria vesca HOM05D006007 ORTHO05D007518 1.2e-98 364.4 428 56.1
Manes.02G054700 Manihot esculenta HOM05D006007 ORTHO05D007518 2.9e-97 359.8 444 55.9
FAN02G0083 Fragaria x ananassa HOM05D006007 ORTHO05D007518 3.7e-97 359.4 428 55.8
TAR264G0002 Trochodendron aralioides HOM05D006007 ORTHO05D007518 3.7e-97 359.4 425 54.8
GSVIVG01032902001 Vitis vinifera HOM05D006007 ORTHO05D007518 1.4e-96 357.5 436 55.0
FAN09G0451 Fragaria x ananassa HOM05D006007 ORTHO05D007518 1.8e-96 357.1 428 53.5
CSS0026219 Camellia sinensis var. sinensis HOM05D006007 ORTHO05D007518 2.4e-96 356.7 415 55.9
CiPaw.03G088800 Carya illinoinensis HOM05D006007 ORTHO05D007518 7.8e-95 351.7 430 51.9
CSS0007202 Camellia sinensis var. sinensis HOM05D006007 ORTHO05D007518 3.9e-94 349.4 416 55.8
Ciclev10011374m.g Citrus clementina HOM05D006007 ORTHO05D007518 1.9e-93 347.1 392 56.9
FAN14G4567 Fragaria x ananassa HOM05D006007 ORTHO05D007518 5.6e-93 345.5 447 53.2
Potri.017G093600 Populus trichocarpa HOM05D006007 ORTHO05D007518 1.4e-91 340.9 420 52.9
CANSAT64G1701 Cannabis sativa HOM05D006007 ORTHO05D007518 3.1e-91 339.7 451 51.9
Nn4g23426 Nelumbo nucifera HOM05D006007 ORTHO05D007518 1.2e-90 337.8 429 55.7
Gorai.007G082800 Gossypium raimondii HOM05D006007 ORTHO05D007518 2.0e-90 337.0 453 53.0
Dinv34943 Davidia involucrata HOM05D006007 ORTHO05D007518 3.4e-90 336.3 299 65.2
Duzib264G0491 Durio zibethinus HOM05D006007 ORTHO05D007518 3.4e-90 336.3 432 53.0
Sabra17G0082500 Salix brachista HOM05D006007 ORTHO05D007518 2.4e-88 330.1 418 52.4
Gohir.A11G072800 Gossypium hirsutum HOM05D006007 ORTHO05D007518 2.0e-87 327.0 452 52.4
Thecc.04G095300 Theobroma cacao HOM05D006007 ORTHO05D007518 6.0e-87 325.5 422 51.4
Gohir.D11G077100 Gossypium hirsutum HOM05D006007 ORTHO05D007518 7.8e-87 325.1 452 52.0
Haze_14433 Corylus avellana HOM05D006007 ORTHO05D007518 1.6e-84 317.4 507 45.6
Glyma.18G266400 Glycine max HOM05D006007 ORTHO05D007518 2.0e-82 310.5 466 48.7
Ca_04352_v3 Cicer arietinum L. HOM05D006007 ORTHO05D007518 5.8e-82 308.9 502 49.0
Cc07_g04190 Coffea canephora HOM05D006007 ORTHO05D007518 7.5e-82 308.5 420 49.0
Phvul.008G033600 Phaseolus vulgaris HOM05D006007 ORTHO05D007518 2.2e-81 307.0 464 45.0
CiPaw.04G055900 Carya illinoinensis HOM05D006007 ORTHO05D007518 3.7e-81 306.2 312 59.9
Lj1g0023913 Lotus japonicus HOM05D006007 ORTHO05D007518 8.3e-81 305.1 478 46.0
Nitab4.5_0000212g0230 Nicotiana tabacum HOM05D006007 ORTHO05D007518 4.6e-79 299.3 417 50.6
Medtr7g013700 Medicago truncatula HOM05D006007 ORTHO05D007518 8.6e-78 295.0 449 51.2
vmacro05632 Vaccinium macrocarpon HOM05D006007 ORTHO05D007518 4.3e-77 292.7 416 52.9
Hma1.2p1_0481F.1_g162150 Hydrangea macrophylla HOM05D006007 ORTHO05D007518 7.3e-77 292.0 389 52.2
Hma1.2p1_0481F.1_g162140 Hydrangea macrophylla HOM05D006007 ORTHO05D007518 9.5e-77 291.6 388 52.3
PSO017G6380 Papaver somniferum HOM05D006007 ORTHO05D007518 9.5e-77 291.6 435 52.4
Cpa.g.sc14.172 Carica papaya HOM05D006007 ORTHO05D007518 2.1e-76 290.4 311 59.5
EL10Ac2g03139 Beta vulgaris HOM05D006007 ORTHO05D007518 6.2e-76 288.9 434 49.8
PSO478G1877 Papaver somniferum HOM05D006007 ORTHO05D007518 8.1e-76 288.5 433 52.9
Lalb_Chr17g0337001 Lupinus albus HOM05D006007 ORTHO05D007518 1.8e-75 287.3 471 46.5
Sed0005820 Sechium edule HOM05D006007 ORTHO05D007518 5.2e-75 285.8 452 44.2
Aqoxy3G03693 Aquilegia oxysepala HOM05D006007 ORTHO05D007518 6.8e-75 285.4 435 49.7
FAN05G2596 Fragaria x ananassa HOM05D006007 ORTHO05D007518 8.9e-75 285.0 301 59.8
Solyc02g066940.4 Solanum lycopersicum HOM05D006007 ORTHO05D007518 8.9e-75 285.0 426 51.6
CAN.G398.20 Capsicum annuum HOM05D006007 ORTHO05D007518 1.2e-74 284.6 423 49.6
Prupe.3G255200 Prunus persica HOM05D006007 ORTHO05D007518 1.2e-74 284.6 303 58.4
PGSC0003DMG400025145 Solanum tuberosum HOM05D006007 ORTHO05D007518 3.4e-74 283.1 420 50.0
THA.LOC104823889 Tarenaya hassleriana HOM05D006007 ORTHO05D007518 4.4e-74 282.7 430 50.7
MELO3C022635.2 Cucumis melo HOM05D006007 ORTHO05D007518 7.6e-74 282.0 476 41.2
ECA246G0757 Erigeron canadensis HOM05D006007 ORTHO05D007518 1.1e-72 278.1 413 48.9
A02p36640 Brassica napus HOM05D006007 ORTHO05D007518 1.4e-72 277.7 401 50.6
BraA02t08659Z Brassica rapa HOM05D006007 ORTHO05D007518 5.4e-72 275.8 401 50.4
Thhalv10003901m.g Eutrema salsugineum HOM05D006007 ORTHO05D007518 4.6e-71 272.7 391 47.3
CDE02G4269 Ceratophyllum demersum HOM05D006007 ORTHO05D007518 1.3e-70 271.2 428 44.2
Sp2g17990 Schrenkiella parvula HOM05D006007 ORTHO05D007518 2.3e-70 270.4 403 52.4
arahy.Tifrunner.gnm1.ann1.J3LTHX Arachis hypogaea HOM05D006007 ORTHO05D007518 6.6e-70 268.9 564 39.9
arahy.Tifrunner.gnm1.ann1.EQE0CJ Arachis hypogaea HOM05D006007 ORTHO05D007518 8.6e-70 268.5 567 40.4
BcaB07g30079 Brassica carinata HOM05D006007 ORTHO05D007518 3.3e-69 266.5 407 49.6
BcaC03g17580 Brassica carinata HOM05D006007 ORTHO05D007518 4.3e-69 266.2 402 50.5
Glyma.08G245100 Glycine max HOM05D006007 ORTHO05D007518 5.6e-69 265.8 331 50.8
C02p55600 Brassica napus HOM05D006007 ORTHO05D007518 7.3e-69 265.4 402 50.7
BolC2t11616H Brassica oleracea HOM05D006007 ORTHO05D007518 7.3e-69 265.4 402 50.7
Aa31LG2G3900 Aethionema arabicum HOM05D006007 ORTHO05D007518 9.6e-69 265.0 307 54.7
Ca_30479_v3 Cicer arietinum L. HOM05D006007 ORTHO05D007518 9.6e-69 265.0 350 49.7
Oeu004412.3 Olea europaea HOM05D006007 ORTHO05D007518 9.6e-69 265.0 499 44.7
PGR004G1158 Punica granatum HOM05D006007 ORTHO05D007518 1.2e-68 264.6 381 47.2
ATR0177G014 Amborella trichopoda HOM05D006007 ORTHO05D007518 4.7e-68 262.7 431 43.6
MD09G1066400 Malus domestica HOM05D006007 ORTHO05D007518 8.1e-68 261.9 369 51.5
Hund15552 Selenicereus undatus HOM05D006007 ORTHO05D007518 6.8e-67 258.8 481 44.5
DCAR_005549 Daucus carota HOM05D006007 ORTHO05D007518 1.2e-66 258.1 432 43.8
Lj4A118G52 Lonicera japonica HOM05D006007 ORTHO05D007518 2.0e-66 257.3 413 44.3
Nitab4.5_0010627g0030 Nicotiana tabacum HOM05D006007 ORTHO05D007518 9.9e-66 255.0 419 48.7
MSTRG.23885 Avicennia marina HOM05D006007 ORTHO05D007518 1.3e-65 254.6 405 43.5
Sopen02g016130 Solanum pennellii HOM05D006007 ORTHO05D007518 2.9e-65 253.4 296 56.1
Peaxi162Scf00991g00329 Petunia axillaris HOM05D006007 ORTHO05D007518 8.4e-65 251.9 299 54.5
HPP92_007829 Vanilla planifolia HOM05D006007 ORTHO05D007518 8.4e-65 251.9 466 41.4
Carub.0005s0814 Capsella rubella HOM05D006007 ORTHO05D007518 1.9e-64 250.8 300 53.3
AL5G19590 Arabidopsis lyrata HOM05D006007 ORTHO05D007518 3.2e-64 250.0 299 53.8
AUR62018183 Chenopodium quinoa HOM05D006007 ORTHO05D007518 5.4e-64 249.2 319 51.4
HanXRQChr17g0546081 Helianthus annuus HOM05D006007 ORTHO05D007518 5.4e-64 249.2 412 49.0
AT3G29390 Arabidopsis thaliana HOM05D006007 ORTHO05D007518 7.1e-64 248.8 304 53.6
ClCG07G016350 Citrullus lanatus HOM05D006007 ORTHO05D007518 2.7e-63 246.9 594 35.9
AUR62038668 Chenopodium quinoa HOM05D006007 ORTHO05D007518 1.1e-61 241.5 285 54.7
CsaV3_4G009190 Cucumis sativus L. HOM05D006007 ORTHO05D007518 1.5e-61 241.1 330 47.6
Ah.10g032260 Amaranthus hybridus HOM05D006007 ORTHO05D007518 1.3e-60 238.0 322 49.7
Psat3g201920 Pisum sativum HOM05D006007 ORTHO05D007518 1.3e-60 238.0 313 50.5
COL.COLO4_07027 Corchorus olitorius HOM05D006007 ORTHO05D007518 3.6e-60 236.5 268 56.0
Rhsim10G0048800 Rhododendron simsii HOM05D006007 ORTHO05D007518 4.8e-60 236.1 413 41.2
Migut.H00628 Erythranthe guttata HOM05D006007 ORTHO05D007518 1.5e-58 231.1 292 54.1
Sc10g0004670 Simmondsia chinensis HOM05D006007 ORTHO05D007518 2.1e-55 220.7 365 43.3
unitig_52.g17640 Utricularia gibba HOM05D006007 ORTHO05D007518 7.9e-55 218.8 398 45.5
Zm00001eb008620 Zea mays HOM05D006007 ORTHO05D007518 3.0e-54 216.9 484 43.2
SalBow1G7079 Salvia bowleyana HOM05D006007 ORTHO05D007518 6.6e-54 215.7 288 50.3
Lsat_1_v5_gn_3_97780 Lactuca sativa HOM05D006007 ORTHO05D007518 2.8e-52 210.3 420 39.3
MBI19_g00630_MAGBIO Magnolia biondii HOM05D006007 ORTHO05D007518 4.8e-52 209.5 362 47.8
TPR.G33475 Trifolium pratense HOM05D006007 ORTHO05D007518 5.5e-40 169.5 136 68.4
SEGI_40404 Sequoiadendron giganteum HOM05D006007 ORTHO05D007518 3.0e-38 163.7 416 33.7
Oeu051018.1 Olea europaea HOM05D006007 ORTHO05D007518 1.4e-35 154.8 235 47.7
Mapoly0218s0012 Marchantia polymorpha HOM05D006007 ORTHO05D007518 6.7e-30 136.0 436 31.2
SHI25685 Sapria himalayana HOM05D006007 ORTHO05D007518 9.7e-29 132.1 121 61.2
CDE05G3437 Ceratophyllum demersum HOM05D006007 ORTHO05D007518 1.8e-27 127.9 252 38.9
HPP92_007749 Vanilla planifolia HOM05D006007 ORTHO05D007518 1.3e-25 121.7 113 55.8
MBI19_g00631_MAGBIO Magnolia biondii HOM05D006007 ORTHO05D007518 1.5e-21 108.2 88 59.1
Pp3c3_22820 Physcomitrium patens HOM05D006007 ORTHO05D007518 7.4e-21 105.9 335 31.0
BcaC03g17562 Brassica carinata HOM05D006007 ORTHO05D007518 1.4e-16 91.7 230 37.4
CBR_g19543 Chara braunii HOM05D006007 ORTHO05D007518 4.7e-15 86.7 276 29.7
BolC2t11584H Brassica oleracea HOM05D006007 ORTHO05D007518 3.9e-14 83.6 70 65.7
MBI15_g14467_MAGBIO Magnolia biondii HOM05D003623 ORTHO05D007518 6.7e-14 82.8 154 40.3
HPP92_007750 Vanilla planifolia HOM05D006007 ORTHO05D007518 5.9e-10 69.7 150 39.3
MD09G1066300 Malus domestica HOM05D006007 ORTHO05D007518 1.7e-09 68.2 55 65.5
Cre09.g389900 Chlamydomonas reinhardtii HOM05D006007 ORTHO05D007518 6.5e-09 66.2 86 40.7
Sc10g0004660 Simmondsia chinensis HOM05D006007 ORTHO05D007518 3.2e-08 63.9 55 58.2
CARHR153030 Cardamine hirsuta HOM05D006007 ORTHO05D007518 3.0e-06 57.4 52 55.8
CDE05G1269 Ceratophyllum demersum HOM05D006007 ORTHO05D007518 4.0e-06 57.0 58 46.6


User provided reference genes

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