Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Eucgr.J01289 Eucalyptus grandis HOM05D007927 ORTHO05D010029 1.2e-124 449.9 231 100.0
PGR102G3035 Punica granatum HOM05D007927 ORTHO05D010029 2.0e-76 289.7 232 70.7
CiPaw.04G081700 Carya illinoinensis HOM05D007927 ORTHO05D010029 7.3e-74 281.2 232 68.1
Dinv07117 Davidia involucrata HOM05D007927 ORTHO05D010029 4.0e-72 275.4 239 66.5
Dinv24372 Davidia involucrata HOM05D007927 ORTHO05D010029 4.0e-72 275.4 235 67.2
ClCG02G000450 Citrullus lanatus HOM05D007927 ORTHO05D010029 1.5e-71 273.5 226 68.6
COL.COLO4_35756 Corchorus olitorius HOM05D007927 ORTHO05D010029 3.4e-71 272.3 230 66.5
Hma1.2p1_0476F.1_g160770 Hydrangea macrophylla HOM05D007927 ORTHO05D010029 4.4e-71 271.9 228 67.5
Manes.13G085601 Manihot esculenta HOM05D007927 ORTHO05D010029 5.8e-71 271.6 229 66.8
TAR628G1503 Trochodendron aralioides HOM05D007927 ORTHO05D010029 1.3e-70 270.4 228 67.5
Glyma.05G191900 Glycine max HOM05D007927 ORTHO05D010029 1.1e-69 267.3 233 64.8
GSVIVG01026475001 Vitis vinifera HOM05D007927 ORTHO05D010029 1.4e-69 266.9 224 65.6
QL10p043457 Quercus lobata HOM05D007927 ORTHO05D010029 1.9e-69 266.5 242 64.9
FvH4_1g24440 Fragaria vesca HOM05D007927 ORTHO05D010029 2.4e-69 266.2 192 74.5
FAN19G2953 Fragaria x ananassa HOM05D007927 ORTHO05D010029 2.4e-69 266.2 192 74.5
TWI75G1488 Tripterygium wilfordii HOM05D007927 ORTHO05D010029 2.4e-69 266.2 232 66.8
Prupe.4G271700 Prunus persica HOM05D007927 ORTHO05D010029 4.1e-69 265.4 236 64.4
Cfa002902 Carpinus fangiana HOM05D007927 ORTHO05D001116 9.2e-69 264.2 162 82.7
FAN28G0845 Fragaria x ananassa HOM05D007927 ORTHO05D010029 9.2e-69 264.2 231 65.4
CsaV3_2G019410 Cucumis sativus L. HOM05D007927 ORTHO05D010029 1.2e-68 263.8 238 65.5
MD01G1005400 Malus domestica HOM05D007927 ORTHO05D010029 1.2e-68 263.8 232 66.4
Nn1g06275 Nelumbo nucifera HOM05D007927 ORTHO05D010029 1.6e-68 263.5 199 72.9
Aqoxy5G02324 Aquilegia oxysepala HOM05D007927 ORTHO05D010029 2.0e-68 263.1 226 65.5
Atru.chr4.915 Acer truncatum HOM05D007927 ORTHO05D010029 2.7e-68 262.7 227 67.4
Duzib264G0901 Durio zibethinus HOM05D007927 ORTHO05D010029 3.5e-68 262.3 235 63.0
Rhsim08G0002700 Rhododendron simsii HOM05D007927 ORTHO05D010029 4.6e-68 261.9 234 65.4
Phvul.002G272300 Phaseolus vulgaris HOM05D007927 ORTHO05D010029 6.0e-68 261.5 232 64.2
CSS0028810 Camellia sinensis var. sinensis HOM05D007927 ORTHO05D010029 7.8e-68 261.2 237 64.1
vmacro18670 Vaccinium macrocarpon HOM05D007927 ORTHO05D010029 2.3e-67 259.6 228 63.6
VMungo0251G0724 Vigna mungo HOM05D007927 ORTHO05D010029 3.9e-67 258.8 230 63.9
MBI03_g42544_MAGBIO Magnolia biondii HOM05D007927 ORTHO05D010029 6.6e-67 258.1 222 67.1
Thecc.01G133600 Theobroma cacao HOM05D007927 ORTHO05D010029 6.6e-67 258.1 231 63.6
TPR.G37352 Trifolium pratense HOM05D007927 ORTHO05D010029 6.6e-67 258.1 239 62.8
Haze_25255 Corylus avellana HOM05D007927 ORTHO05D010029 8.6e-67 257.7 248 62.1
Lj4g0020524 Lotus japonicus HOM05D007927 ORTHO05D010029 8.6e-67 257.7 228 65.4
MBI03_g37385_MAGBIO Magnolia biondii HOM05D007927 ORTHO05D010029 8.6e-67 257.7 222 67.1
Actinidia01389 Actinidia chinensis HOM05D007927 ORTHO05D010029 1.1e-66 257.3 237 63.3
DCAR_014334 Daucus carota HOM05D007927 ORTHO05D010029 1.1e-66 257.3 159 81.8
RcHm_v2.0_Chr2g0121541 Rosa chinensis HOM05D007927 ORTHO05D010029 1.5e-66 256.9 230 64.3
Psat7g045960 Pisum sativum HOM05D007927 ORTHO05D010029 4.3e-66 255.4 233 63.9
Ciclev10002360m.g Citrus clementina HOM05D007927 ORTHO05D010029 5.6e-66 255.0 226 65.0
Potri.005G063600 Populus trichocarpa HOM05D007927 ORTHO05D010029 7.3e-66 254.6 228 63.6
ATR0584G243 Amborella trichopoda HOM05D007927 ORTHO05D010029 1.2e-65 253.8 194 69.6
Cpa.g.sc42.162 Carica papaya HOM05D007927 ORTHO05D010029 1.6e-65 253.4 223 65.0
Ca_17635_v3 Cicer arietinum L. HOM05D007927 ORTHO05D010029 6.2e-65 251.5 155 81.9
Gohir.A09G004300 Gossypium hirsutum HOM05D007927 ORTHO05D010029 6.2e-65 251.5 227 64.3
Medtr8g093750 Medicago truncatula HOM05D007927 ORTHO05D010029 6.2e-65 251.5 234 60.7
FAN23G1573 Fragaria x ananassa HOM05D007927 ORTHO05D010029 8.0e-65 251.1 220 65.5
Lj4A837T13 Lonicera japonica HOM05D007927 ORTHO05D010029 1.1e-64 250.8 248 59.3
Gohir.D09G003800 Gossypium hirsutum HOM05D007927 ORTHO05D010029 1.4e-64 250.4 227 63.9
Lsat_1_v5_gn_5_69000 Lactuca sativa HOM05D007927 ORTHO05D010029 5.2e-64 248.4 232 62.1
CDE02G1961 Ceratophyllum demersum HOM05D007927 ORTHO05D010029 9.8e-63 244.2 225 61.3
FAN26G1905 Fragaria x ananassa HOM05D007927 ORTHO05D010029 3.7e-62 242.3 283 54.1
HanXRQChr12g0380561 Helianthus annuus HOM05D007927 ORTHO05D010029 1.9e-61 240.0 238 61.3
Lalb_Chr07g0184391 Lupinus albus HOM05D007927 ORTHO05D010029 3.2e-61 239.2 231 61.0
ECA233G3055 Erigeron canadensis HOM05D007927 ORTHO05D010029 1.2e-60 237.3 237 60.3
Gorai.006G005200 Gossypium raimondii HOM05D007927 ORTHO05D010029 1.7e-59 233.4 219 61.6
Os12g0189700 Oryza sativa ssp. japonica HOM05D007927 ORTHO05D010029 5.2e-56 221.9 159 69.8
MELO3C023232.2 Cucumis melo HOM05D007927 ORTHO05D010029 6.8e-56 221.5 191 68.1
SEGI_35752 Sequoiadendron giganteum HOM05D007927 ORTHO05D010029 1.3e-54 217.2 192 62.0
Pp3c24_20210 Physcomitrium patens HOM05D007927 ORTHO05D010029 1.0e-51 207.6 154 66.9
AagrBONN_evm.TU.Sc2ySwM_344.4939 Anthoceros agrestis HOM05D007927 ORTHO05D010029 1.2e-49 200.7 156 64.1
Mapoly0115s0058 Marchantia polymorpha HOM05D007927 ORTHO05D010029 1.2e-44 184.1 150 62.0
Sabra07G0086100 Salix brachista HOM05D007927 ORTHO05D010029 2.3e-43 179.9 96 89.6
Sabra05G0052800 Salix brachista HOM05D007927 ORTHO05D010029 6.0e-36 155.2 231 45.0
Lj4C838G8 Lonicera japonica HOM05D007927 ORTHO05D010029 2.3e-35 153.3 248 43.1
SEGI_09554 Sequoiadendron giganteum HOM05D007927 ORTHO05D010029 2.1e-33 146.7 89 83.1
FAN19G2631 Fragaria x ananassa HOM05D007927 ORTHO05D010029 1.6e-25 120.6 138 53.6
FAN23G0137 Fragaria x ananassa HOM05D007927 ORTHO05D010029 3.7e-25 119.4 134 53.7
Cre01.g055151 Chlamydomonas reinhardtii HOM05D007927 ORTHO05D010029 1.9e-18 97.1 143 37.8
Sabra07G0086200 Salix brachista HOM05D007927 ORTHO05D010029 6.9e-16 88.6 129 48.1
Gohir.D01G107700 Gossypium hirsutum HOM05D005170 ORTHO05D010029 2.2e-14 83.6 111 44.1
Gohir.D06G120200 Gossypium hirsutum HOM05D005170 ORTHO05D010029 3.8e-14 82.8 111 43.2
Gohir.D03G074800 Gossypium hirsutum HOM05D007927 ORTHO05D010029 6.5e-14 82.0 46 84.8
Gorai.010G138300 Gossypium raimondii HOM05D007927 ORTHO05D010029 1.1e-13 81.3 47 80.9
Gohir.D09G047700 Gossypium hirsutum HOM05D007927 ORTHO05D010029 3.2e-13 79.7 47 80.9
FvH4_1g24060 Fragaria vesca HOM05D007927 ORTHO05D010029 5.5e-13 79.0 48 81.2
Gorai.009G413100 Gossypium raimondii HOM05D007927 ORTHO05D010029 3.5e-12 76.3 47 76.6
Gohir.D04G109100 Gossypium hirsutum HOM05D007927 ORTHO05D010029 8.7e-11 71.6 47 74.5
Pp3c2_6800 Physcomitrium patens HOM05D019817 ORTHO05D016515 6.9e-08 62.0 113 32.7
Mapoly0178s0020 Marchantia polymorpha HOM05D019817 ORTHO05D016515 5.9e-07 58.9 92 35.9
Gohir.D11G266900 Gossypium hirsutum HOM05D005170 ORTHO05D006985 3.8e-06 56.2 29 93.1
SEGI_14611 Sequoiadendron giganteum HOM05D019817 ORTHO05D016515 5.0e-06 55.8 92 32.6
PRCOL_00005335 Prasinoderma coloniale HOM05D016266 ORTHO05D019595 8.5e-06 55.1 94 28.7


User provided reference genes

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