Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Eucgr.J01258 Eucalyptus grandis HOM05D007237 ORTHO05D008854 7.9e-55 216.9 108 100.0
Gorai.008G105400 Gossypium raimondii HOM05D007237 ORTHO05D008854 1.1e-40 169.9 108 76.9
Duzib138G0953 Durio zibethinus HOM05D007237 ORTHO05D008854 7.1e-40 167.2 108 75.0
Gohir.A12G094200 Gossypium hirsutum HOM05D007237 ORTHO05D008854 1.2e-39 166.4 100 79.0
CiPaw.13G002300 Carya illinoinensis HOM05D007237 ORTHO05D008854 2.1e-39 165.6 108 74.1
Thecc.01G414400 Theobroma cacao HOM05D007237 ORTHO05D008854 2.7e-39 165.2 108 74.1
Prupe.2G008100 Prunus persica HOM05D007237 ORTHO05D008854 3.5e-39 164.9 103 73.8
COL.COLO4_23903 Corchorus olitorius HOM05D005285 ORTHO05D006829 7.9e-39 163.7 90 85.6
Gohir.D08G166900 Gossypium hirsutum HOM05D007237 ORTHO05D008854 1.0e-38 163.3 106 72.6
Gorai.004G174300 Gossypium raimondii HOM05D007237 ORTHO05D008854 1.0e-38 163.3 106 72.6
TWI09G0768 Tripterygium wilfordii HOM05D007237 ORTHO05D008854 1.3e-38 162.9 108 71.3
TWI53G0305 Tripterygium wilfordii HOM05D007237 ORTHO05D008854 2.3e-38 162.2 105 72.4
MSTRG.28082 Avicennia marina HOM05D007237 ORTHO05D008854 3.0e-38 161.8 108 70.4
Gohir.A08G146000 Gossypium hirsutum HOM05D007237 ORTHO05D008854 3.0e-38 161.8 106 71.7
Manes.10G147700 Manihot esculenta HOM05D007237 ORTHO05D008854 3.0e-38 161.8 100 73.0
Manes.07G003400 Manihot esculenta HOM05D007237 ORTHO05D008854 5.1e-38 161.0 104 71.2
CSS0046270 Camellia sinensis var. sinensis HOM05D007237 ORTHO05D008854 8.7e-38 160.2 106 67.9
Dinv43468 Davidia involucrata HOM05D007237 ORTHO05D008854 1.9e-37 159.1 98 73.5
MD07G1005700 Malus domestica HOM05D007237 ORTHO05D008854 1.9e-37 159.1 101 73.3
CANSAT21G0694 Cannabis sativa HOM05D007237 ORTHO05D008854 2.5e-37 158.7 102 75.5
MD02G1316200 Malus domestica HOM05D007237 ORTHO05D008854 7.4e-37 157.1 101 71.3
Atru.chr11.2633 Acer truncatum HOM05D007237 ORTHO05D008854 2.2e-36 155.6 100 70.0
ECA234G1833 Erigeron canadensis HOM05D007237 ORTHO05D008854 2.8e-36 155.2 103 69.9
Glyma.15G271600 Glycine max HOM05D007237 ORTHO05D008854 2.8e-36 155.2 106 68.9
Sc11g0009340 Simmondsia chinensis HOM05D007237 ORTHO05D008854 2.8e-36 155.2 108 65.7
Hma1.2p1_0845F.1_g227580 Hydrangea macrophylla HOM05D007237 ORTHO05D008854 6.3e-36 154.1 103 67.0
Migut.O00928 Erythranthe guttata HOM05D007237 ORTHO05D008854 1.4e-35 152.9 110 71.8
Peaxi162Scf00428g01024 Petunia axillaris HOM05D007237 ORTHO05D008854 1.4e-35 152.9 109 67.0
HanXRQChr16g0519611 Helianthus annuus HOM05D007237 ORTHO05D008854 2.4e-35 152.1 107 66.4
Oeu036184.1 Olea europaea HOM05D007237 ORTHO05D008854 2.4e-35 152.1 101 70.3
arahy.Tifrunner.gnm1.ann1.CQ9Q2Z Arachis hypogaea HOM05D007237 ORTHO05D008854 3.1e-35 151.8 101 70.3
QL04p004894 Quercus lobata HOM05D007237 ORTHO05D008854 3.1e-35 151.8 103 69.9
Sabra16G0166400 Salix brachista HOM05D007237 ORTHO05D008854 3.1e-35 151.8 99 70.7
Potri.001G271000 Populus trichocarpa HOM05D007237 ORTHO05D008854 4.1e-35 151.4 99 68.7
Glyma.08G152200 Glycine max HOM05D007237 ORTHO05D008854 5.3e-35 151.0 106 66.0
SalBow4G0796 Salvia bowleyana HOM05D007237 ORTHO05D008854 5.3e-35 151.0 99 73.7
Prupe.2G008300 Prunus persica HOM05D007237 ORTHO05D008854 6.9e-35 150.6 97 71.1
SGA_v2.0_scaffold95G28787 Striga asiatica HOM05D000288 ORTHO05D000173 6.9e-35 150.6 99 75.8
arahy.Tifrunner.gnm1.ann1.PP9VDR Arachis hypogaea HOM05D007237 ORTHO05D008854 9.0e-35 150.2 96 72.9
PGR044G2203 Punica granatum HOM05D007237 ORTHO05D008854 9.0e-35 150.2 107 63.6
RcHm_v2.0_Chr1g0314811 Rosa chinensis HOM05D007237 ORTHO05D008854 9.0e-35 150.2 103 68.9
AUR62009369 Chenopodium quinoa HOM05D005285 ORTHO05D006829 1.2e-34 149.8 87 74.7
Lalb_Chr03g0033911 Lupinus albus HOM05D007237 ORTHO05D008854 1.2e-34 149.8 94 74.5
arahy.Tifrunner.gnm1.ann1.1X74KR Arachis hypogaea HOM05D007237 ORTHO05D008854 1.5e-34 149.4 108 66.7
CAN.G1393.1 Capsicum annuum HOM05D007237 ORTHO05D008854 1.5e-34 149.4 100 73.0
Ciclev10033078m.g Citrus clementina HOM05D007237 ORTHO05D008854 2.0e-34 149.1 103 67.0
FvH4_7g00620 Fragaria vesca HOM05D007237 ORTHO05D008854 2.0e-34 149.1 98 69.4
Psat5g205480 Pisum sativum HOM05D007237 ORTHO05D008854 2.6e-34 148.7 97 67.0
Solyc01g086830.4 Solanum lycopersicum HOM05D007237 ORTHO05D008854 2.6e-34 148.7 104 69.2
Sopen01g033840 Solanum pennellii HOM05D007237 ORTHO05D008854 3.4e-34 148.3 102 68.6
Aqoxy2G00108 Aquilegia oxysepala HOM05D007237 ORTHO05D008854 5.9e-34 147.5 100 67.0
HanXRQChr11g0330541 Helianthus annuus HOM05D007237 ORTHO05D008854 5.9e-34 147.5 107 62.6
Lsat_1_v5_gn_4_46201 Lactuca sativa HOM05D007237 ORTHO05D008854 1.0e-33 146.7 97 69.1
Oeu036183.1 Olea europaea HOM05D000288 ORTHO05D008854 1.3e-33 146.4 95 71.6
SGA_v2.0_scaffold4G02250 Striga asiatica HOM05D000288 ORTHO05D000173 1.3e-33 146.4 103 68.0
vmacro13649 Vaccinium macrocarpon HOM05D000102 ORTHO05D000138 1.3e-33 146.4 92 70.7
HanXRQChr17g0563491 Helianthus annuus HOM05D007237 ORTHO05D008854 1.7e-33 146.0 107 60.7
Lalb_Chr20g0108101 Lupinus albus HOM05D007237 ORTHO05D008854 2.2e-33 145.6 91 70.3
Ah.12g061430 Amaranthus hybridus HOM05D000016 ORTHO05D000433 5.0e-33 144.4 99 64.6
FAN01G1198 Fragaria x ananassa HOM05D005285 ORTHO05D006829 6.5e-33 144.1 97 68.0
Actinidia31685 Actinidia chinensis HOM05D007237 ORTHO05D008854 8.5e-33 143.7 98 67.3
ATR0605G218 Amborella trichopoda HOM05D007237 ORTHO05D008854 1.9e-32 142.5 98 64.3
Cc02_g27480 Coffea canephora HOM05D007237 ORTHO05D008854 5.5e-32 141.0 106 63.2
Lj3g0027771 Lotus japonicus HOM05D007237 ORTHO05D008854 1.2e-31 139.8 100 66.0
TPR.G12234 Trifolium pratense HOM05D007237 ORTHO05D008854 2.1e-31 139.0 97 67.0
Medtr3g027590 Medicago truncatula HOM05D007237 ORTHO05D008854 4.6e-31 137.9 96 62.5
MBI04_g14266_MAGBIO Magnolia biondii HOM05D007237 ORTHO05D008854 6.1e-31 137.5 99 65.7
Phvul.005G037300 Phaseolus vulgaris HOM05D007237 ORTHO05D008854 1.0e-30 136.7 91 68.1
EL10Ac2g04307 Beta vulgaris HOM05D007237 ORTHO05D008854 1.8e-30 136.0 87 70.1
PSO017G6688 Papaver somniferum HOM05D007237 ORTHO05D008854 3.0e-30 135.2 86 69.8
THA.LOC104825138 Tarenaya hassleriana HOM05D007237 ORTHO05D008854 3.0e-30 135.2 119 52.1
Sed0015658 Sechium edule HOM05D007237 ORTHO05D008854 1.1e-29 133.3 95 60.0
unitig_8.g3625 Utricularia gibba HOM05D007237 ORTHO05D008854 1.1e-29 133.3 99 62.6
Aa31LG10G7220 Aethionema arabicum HOM05D007237 ORTHO05D008854 1.5e-29 132.9 79 72.2
Carub.0005s1847 Capsella rubella HOM05D007237 ORTHO05D008854 1.5e-29 132.9 79 70.9
Thhalv10010991m.g Eutrema salsugineum HOM05D007237 ORTHO05D008854 1.5e-29 132.9 79 69.6
BcaC06g33382 Brassica carinata HOM05D007237 ORTHO05D008854 2.5e-29 132.1 79 70.9
A03p48720 Brassica napus HOM05D007237 ORTHO05D008854 2.5e-29 132.1 79 70.9
C07p46810 Brassica napus HOM05D007237 ORTHO05D008854 2.5e-29 132.1 79 70.9
BolC7t45198H Brassica oleracea HOM05D007237 ORTHO05D008854 2.5e-29 132.1 79 70.9
BraA03t13972Z Brassica rapa HOM05D007237 ORTHO05D008854 2.5e-29 132.1 79 70.9
Sp5g10150 Schrenkiella parvula HOM05D007237 ORTHO05D008854 3.3e-29 131.7 123 52.0
AT3G07450 Arabidopsis thaliana HOM05D007237 ORTHO05D008854 4.3e-29 131.3 104 59.6
AL5G32700 Arabidopsis lyrata HOM05D007237 ORTHO05D008854 7.4e-29 130.6 125 50.4
BolC8t50357H Brassica oleracea HOM05D007237 ORTHO05D008854 7.4e-29 130.6 123 51.2
Ah.12g052640 Amaranthus hybridus HOM05D000491 ORTHO05D008854 9.7e-29 130.2 102 62.7
A09p45190 Brassica napus HOM05D007237 ORTHO05D008854 9.7e-29 130.2 114 53.5
BraA09t39982Z Brassica rapa HOM05D007237 ORTHO05D008854 9.7e-29 130.2 114 53.5
CARHR161870 Cardamine hirsuta HOM05D007237 ORTHO05D008854 1.7e-28 129.4 124 50.0
BcaNung06095 Brassica carinata HOM05D007237 ORTHO05D008854 2.8e-28 128.6 123 50.4
C08p27400 Brassica napus HOM05D007237 ORTHO05D008854 2.8e-28 128.6 123 50.4
AL3G18770 Arabidopsis lyrata HOM05D007237 ORTHO05D008854 3.7e-28 128.3 98 57.1
BcaB03g14701 Brassica carinata HOM05D007237 ORTHO05D008854 4.8e-28 127.9 104 56.7
A04p07230 Brassica napus HOM05D007237 ORTHO05D008854 4.8e-28 127.9 90 63.3
Carub.0003s0700 Capsella rubella HOM05D007237 ORTHO05D008854 4.8e-28 127.9 103 58.3
C05p59860 Brassica napus HOM05D007237 ORTHO05D008854 6.3e-28 127.5 104 54.8
BolC5t34640H Brassica oleracea HOM05D007237 ORTHO05D008854 6.3e-28 127.5 104 54.8
CARHR082100 Cardamine hirsuta HOM05D007237 ORTHO05D008854 8.2e-28 127.1 103 57.3
BcaC02g09277 Brassica carinata HOM05D007237 ORTHO05D008854 1.4e-27 126.3 110 55.5
C04p40790 Brassica napus HOM05D007237 ORTHO05D008854 1.4e-27 126.3 110 55.5
A05p40750 Brassica napus HOM05D007237 ORTHO05D008854 2.4e-27 125.6 104 53.8
BraA05t22806Z Brassica rapa HOM05D007237 ORTHO05D008854 2.4e-27 125.6 104 53.8
Thhalv10022125m.g Eutrema salsugineum HOM05D007237 ORTHO05D008854 2.4e-27 125.6 74 73.0
C03p42880 Brassica napus HOM05D007237 ORTHO05D008854 4.1e-27 124.8 104 53.8
BolC3t16556H Brassica oleracea HOM05D007237 ORTHO05D008854 4.1e-27 124.8 104 53.8
A03p35260 Brassica napus HOM05D007237 ORTHO05D008854 9.1e-27 123.6 104 52.9
BraA03t12704Z Brassica rapa HOM05D007237 ORTHO05D008854 9.1e-27 123.6 104 52.9
BcaC01g04282 Brassica carinata HOM05D007237 ORTHO05D008854 4.5e-26 121.3 94 54.3
THA.LOC104820127 Tarenaya hassleriana HOM05D007237 ORTHO05D008854 2.9e-25 118.6 75 70.7
Haze_03241 Corylus avellana HOM05D007237 ORTHO05D008854 5.0e-25 117.9 83 67.5
Oeu039102.1 Olea europaea HOM05D005285 ORTHO05D006829 1.4e-24 116.3 101 56.4
Oeu039103.1 Olea europaea HOM05D005285 ORTHO05D008854 1.4e-24 116.3 101 56.4
ClCG09G004370 Citrullus lanatus HOM05D007237 ORTHO05D008854 1.9e-24 115.9 103 49.5
Rhsim07G0053900 Rhododendron simsii HOM05D000102 ORTHO05D000138 1.8e-22 109.4 59 79.7
MELO3C023529.2 Cucumis melo HOM05D007237 ORTHO05D008854 2.3e-22 109.0 103 45.6
CsaV3_7G031300 Cucumis sativus L. HOM05D007237 ORTHO05D008854 5.1e-22 107.8 103 46.6
CDE10G0734 Ceratophyllum demersum HOM05D007237 ORTHO05D008854 1.1e-21 106.7 79 54.4
BcaC05g29536 Brassica carinata HOM05D007237 ORTHO05D008854 9.7e-21 103.6 89 53.9
Sed0001876 Sechium edule HOM05D007237 ORTHO05D008854 5.3e-19 97.8 103 41.7
SHI04057 Sapria himalayana HOM05D007237 ORTHO05D008854 3.2e-16 88.6 104 39.4
Glyma.10G297600 Glycine max HOM05D001848 ORTHO05D001295 4.2e-08 61.6 98 33.7
Phvul.007G001800 Phaseolus vulgaris HOM05D001848 ORTHO05D001295 2.1e-07 59.3 95 34.7
Glyma.20G248700 Glycine max HOM05D001848 ORTHO05D001295 6.1e-07 57.8 104 34.6
Rhsim12G0036500 Rhododendron simsii HOM05D001848 ORTHO05D001295 2.3e-06 55.8 105 36.2
Mapoly0005s0134 Marchantia polymorpha HOM05D010866 ORTHO05D008854 3.0e-06 55.5 59 49.2
TWI38G0794 Tripterygium wilfordii HOM05D001848 ORTHO05D001295 6.7e-06 54.3 63 38.1
GSVIVG01031677001 Vitis vinifera HOM05D001848 ORTHO05D001295 6.7e-06 54.3 58 44.8


User provided reference genes

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