Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Eucgr.J01218 Eucalyptus grandis HOM05D006074 ORTHO05D008728 3.6e-244 847.8 432 100.0
CiPaw.03G029000 Carya illinoinensis HOM05D006074 ORTHO05D008728 1.6e-146 523.5 371 70.6
TAR729G0002 Trochodendron aralioides HOM05D006074 ORTHO05D008728 2.1e-146 523.1 428 65.2
Sabra17G0072000 Salix brachista HOM05D006074 ORTHO05D008728 7.8e-146 521.2 384 69.0
TAR622G0709 Trochodendron aralioides HOM05D006074 ORTHO05D008728 1.7e-145 520.0 360 73.1
Duzib187G1598 Durio zibethinus HOM05D006074 ORTHO05D008728 3.0e-145 519.2 368 72.0
Potri.017G080300 Populus trichocarpa HOM05D006074 ORTHO05D008728 6.6e-145 518.1 387 68.7
Lj2g0007765 Lotus japonicus HOM05D006074 ORTHO05D008728 8.6e-145 517.7 369 73.4
Prupe.3G270100 Prunus persica HOM05D006074 ORTHO05D008728 8.6e-145 517.7 419 63.0
Actinidia02708 Actinidia chinensis HOM05D006074 ORTHO05D008728 1.1e-144 517.3 379 70.7
FAN02G2663 Fragaria x ananassa HOM05D006074 ORTHO05D008728 5.6e-144 515.0 420 64.5
Thecc.04G099800 Theobroma cacao HOM05D006074 ORTHO05D008728 7.3e-144 514.6 368 70.7
Rhsim08G0067900 Rhododendron simsii HOM05D006074 ORTHO05D008728 1.2e-143 513.8 384 68.8
PSO832G2479 Papaver somniferum HOM05D006074 ORTHO05D008728 2.1e-143 513.1 432 62.7
RcHm_v2.0_Chr2g0168871 Rosa chinensis HOM05D006074 ORTHO05D008728 2.1e-143 513.1 372 70.7
FvH4_6g49080 Fragaria vesca HOM05D006074 ORTHO05D008728 2.8e-143 512.7 373 70.5
CSS0024892 Camellia sinensis var. sinensis HOM05D006074 ORTHO05D008728 3.6e-143 512.3 412 65.5
Cpa.g.sc14.19 Carica papaya HOM05D006074 ORTHO05D008728 3.6e-143 512.3 477 57.4
Lju41C23G10 Lonicera japonica HOM05D006074 ORTHO05D008728 3.6e-143 512.3 354 74.0
GSVIVG01011374001 Vitis vinifera HOM05D006074 ORTHO05D008728 3.6e-143 512.3 402 66.4
vmacro18203 Vaccinium macrocarpon HOM05D006074 ORTHO05D008728 1.1e-142 510.8 383 68.7
Gohir.A07G215200 Gossypium hirsutum HOM05D006074 ORTHO05D008728 1.2e-141 507.3 369 70.2
Hma1.2p1_0449F.1_g155300 Hydrangea macrophylla HOM05D006074 ORTHO05D008728 1.5e-141 506.9 367 70.8
Medtr1g039990 Medicago truncatula HOM05D006074 ORTHO05D008728 2.0e-141 506.5 369 70.5
MD09G1048800 Malus domestica HOM05D006074 ORTHO05D008728 2.6e-141 506.1 432 61.6
PGR083G0972 Punica granatum HOM05D006074 ORTHO05D008728 3.4e-141 505.8 425 62.1
QL02p081203 Quercus lobata HOM05D006074 ORTHO05D008728 4.4e-141 505.4 366 70.8
Psat1g075640 Pisum sativum HOM05D006074 ORTHO05D008728 9.9e-141 504.2 371 70.9
Phvul.004G027100 Phaseolus vulgaris HOM05D006074 ORTHO05D008728 2.2e-140 503.1 374 69.3
CSS0026498 Camellia sinensis var. sinensis HOM05D006074 ORTHO05D008728 6.4e-140 501.5 368 71.2
THA.LOC104823933 Tarenaya hassleriana HOM05D006074 ORTHO05D008728 6.4e-140 501.5 404 63.1
Oeu060929.1 Olea europaea HOM05D006074 ORTHO05D008728 3.2e-139 499.2 353 71.1
PSO591G0110 Papaver somniferum HOM05D006074 ORTHO05D008728 4.1e-139 498.8 433 61.9
arahy.Tifrunner.gnm1.ann1.V4TPJI Arachis hypogaea HOM05D006074 ORTHO05D008728 5.4e-139 498.4 368 69.0
ClCG10G014940 Citrullus lanatus HOM05D006074 ORTHO05D008728 5.4e-139 498.4 366 69.1
Sopen03g012680 Solanum pennellii HOM05D006074 ORTHO05D008728 7.1e-139 498.0 353 70.8
CANSAT64G1183 Cannabis sativa HOM05D006074 ORTHO05D008728 9.2e-139 497.7 436 60.3
Lsat_1_v5_gn_4_177200 Lactuca sativa HOM05D006074 ORTHO05D008728 9.2e-139 497.7 393 65.4
CsaV3_3G041590 Cucumis sativus L. HOM05D006074 ORTHO05D008728 2.7e-138 496.1 366 68.6
Lalb_Chr21g0318901 Lupinus albus HOM05D006074 ORTHO05D008728 3.5e-138 495.7 356 69.7
CANSAT64G2140 Cannabis sativa HOM05D006074 ORTHO05D008728 6.0e-138 495.0 436 60.6
Gorai.001G256400 Gossypium raimondii HOM05D006074 ORTHO05D008728 1.0e-137 494.2 403 64.8
HanXRQChr09g0265461 Helianthus annuus HOM05D006074 ORTHO05D008728 2.3e-137 493.0 353 69.7
Aqoxy3G03321 Aquilegia oxysepala HOM05D006074 ORTHO05D008728 3.0e-137 492.7 370 69.7
arahy.Tifrunner.gnm1.ann1.1Y4ZQN Arachis hypogaea HOM05D006074 ORTHO05D008728 3.0e-137 492.7 362 69.3
CAN.G579.8 Capsicum annuum HOM05D006074 ORTHO05D008728 3.0e-137 492.7 372 68.3
PGSC0003DMG400009217 Solanum tuberosum HOM05D006074 ORTHO05D008728 3.9e-137 492.3 353 70.5
Aa31LG2G4460 Aethionema arabicum HOM05D006074 ORTHO05D008728 1.1e-136 490.7 407 62.7
Solyc03g058860.3 Solanum lycopersicum HOM05D006074 ORTHO05D008728 1.9e-136 490.0 353 69.7
MBI02_g10680_MAGBIO Magnolia biondii HOM05D006074 ORTHO05D008728 9.5e-136 487.6 365 66.8
Carub.0005s0731 Capsella rubella HOM05D006074 ORTHO05D008728 1.6e-135 486.9 367 67.0
COL.COLO4_36112 Corchorus olitorius HOM05D006074 ORTHO05D008728 2.8e-135 486.1 343 71.7
ATR0564G024 Amborella trichopoda HOM05D006074 ORTHO05D008728 3.6e-135 485.7 372 66.9
Sp2g17410 Schrenkiella parvula HOM05D006074 ORTHO05D008728 3.6e-135 485.7 367 66.2
AT3G28760 Arabidopsis thaliana HOM05D006074 ORTHO05D008728 4.7e-135 485.3 366 66.7
MELO3C009883.2 Cucumis melo HOM05D006074 ORTHO05D008728 6.2e-135 485.0 356 68.3
BcaC06g30896 Brassica carinata HOM05D006074 ORTHO05D008728 1.1e-134 484.2 366 65.6
Gohir.D07G222100 Gossypium hirsutum HOM05D006074 ORTHO05D008728 1.4e-134 483.8 369 68.6
Migut.H00904 Erythranthe guttata HOM05D006074 ORTHO05D008728 1.8e-134 483.4 363 68.3
DCAR_021653 Daucus carota HOM05D006074 ORTHO05D008728 1.2e-133 480.7 353 68.3
AL5G18490 Arabidopsis lyrata HOM05D006074 ORTHO05D008728 2.6e-133 479.6 370 65.7
A06p40350 Brassica napus HOM05D006074 ORTHO05D008728 4.4e-133 478.8 367 65.1
BraA06t26953Z Brassica rapa HOM05D006074 ORTHO05D008728 4.4e-133 478.8 367 65.1
EL10Ac2g02949 Beta vulgaris HOM05D006074 ORTHO05D008728 7.6e-133 478.0 405 60.5
C07p37700 Brassica napus HOM05D006074 ORTHO05D008728 2.9e-132 476.1 366 65.3
TWI34G1337 Tripterygium wilfordii HOM05D006074 ORTHO05D008728 2.9e-132 476.1 428 58.6
ECA232G4667 Erigeron canadensis HOM05D006074 ORTHO05D008728 8.4e-132 474.6 347 68.6
VMungo0464G0585 Vigna mungo HOM05D006074 ORTHO05D008728 8.4e-132 474.6 357 68.6
AUR62038861 Chenopodium quinoa HOM05D006074 ORTHO05D008728 1.1e-131 474.2 424 59.7
BolC7t44287H Brassica oleracea HOM05D006074 ORTHO05D008728 1.4e-131 473.8 366 65.0
AUR62031615 Chenopodium quinoa HOM05D006074 ORTHO05D008728 1.9e-131 473.4 424 59.7
Cc07_g03180 Coffea canephora HOM05D006074 ORTHO05D008728 2.4e-131 473.0 374 66.3
SalBow1G4287 Salvia bowleyana HOM05D006074 ORTHO05D008728 4.2e-131 472.2 353 65.7
BcaC06g33639 Brassica carinata HOM05D006074 ORTHO05D008728 1.2e-130 470.7 366 64.8
CSS0026374 Camellia sinensis var. sinensis HOM05D006074 ORTHO05D008728 4.6e-130 468.8 362 68.0
Atru.BG.207.p Acer truncatum HOM05D006074 ORTHO05D008728 6.0e-130 468.4 351 67.5
Os03g0170300 Oryza sativa ssp. japonica HOM05D006074 ORTHO05D008728 2.3e-129 466.5 380 63.2
Sc14g0005980 Simmondsia chinensis HOM05D006074 ORTHO05D008728 6.6e-129 464.9 356 67.1
Nn4g23084 Nelumbo nucifera HOM05D006074 ORTHO05D008728 2.5e-128 463.0 322 70.8
Sed0009974 Sechium edule HOM05D006074 ORTHO05D008728 1.3e-127 460.7 344 66.9
CSS0037615 Camellia sinensis var. sinensis HOM05D006074 ORTHO05D008728 6.2e-127 458.4 361 66.2
Hund15626 Selenicereus undatus HOM05D006074 ORTHO05D008728 9.9e-125 451.1 419 59.4
Nitab4.5_0003081g0050 Nicotiana tabacum HOM05D006074 ORTHO05D008728 1.3e-124 450.7 307 73.9
Zm00001eb402270 Zea mays HOM05D006074 ORTHO05D008728 3.8e-124 449.1 354 65.0
Dinv33738 Davidia involucrata HOM05D006074 ORTHO05D008728 6.4e-124 448.4 431 57.5
Nitab4.5_0000002g0350 Nicotiana tabacum HOM05D006074 ORTHO05D008728 8.4e-124 448.0 307 73.6
TPR.G10370 Trifolium pratense HOM05D006074 ORTHO05D008728 8.4e-124 448.0 315 71.4
Glyma.19G020800 Glycine max HOM05D006074 ORTHO05D008728 6.0e-122 441.8 367 62.7
SGA_v2.0_scaffold59G20672 Striga asiatica HOM05D006074 ORTHO05D008728 7.3e-120 434.9 317 68.1
Ca_04272_v3 Cicer arietinum L. HOM05D006074 ORTHO05D008728 4.0e-118 429.1 318 69.8
Peaxi162Scf00451g00822 Petunia axillaris HOM05D006074 ORTHO05D008728 1.9e-115 420.2 353 63.7
Thhalv10004593m.g Eutrema salsugineum HOM05D006074 ORTHO05D008728 6.7e-113 411.8 326 64.1
Manes.15G177000 Manihot esculenta HOM05D006074 ORTHO05D008728 1.2e-109 401.0 273 70.0
Pp3c9_19570 Physcomitrium patens HOM05D006074 ORTHO05D008728 1.2e-106 391.0 353 55.0
AagrBONN_evm.TU.Sc2ySwM_228.462 Anthoceros agrestis HOM05D006074 ORTHO05D008728 2.7e-106 389.8 372 55.1
Pp3c10_1080 Physcomitrium patens HOM05D006074 ORTHO05D008728 6.9e-102 375.2 359 53.5
Mapoly0005s0075 Marchantia polymorpha HOM05D006074 ORTHO05D008728 9.3e-99 364.8 349 54.4
CDE02G2631 Ceratophyllum demersum HOM05D006074 ORTHO05D008728 2.6e-85 320.1 266 60.5
FAN14G0759 Fragaria x ananassa HOM05D006074 ORTHO05D008728 6.5e-84 315.5 388 50.5
unitig_21.g20922 Utricularia gibba HOM05D006074 ORTHO05D008728 2.3e-81 307.0 292 52.7
Glyma.13G064100 Glycine max HOM05D006074 ORTHO05D008728 1.1e-80 304.7 259 64.1
Pp3c15_19890 Physcomitrium patens HOM05D006074 ORTHO05D008728 2.0e-80 303.9 376 45.5
Ciclev10012867m.g Citrus clementina HOM05D006074 ORTHO05D008728 2.6e-77 293.5 187 79.7
MCO08G127 Micromonas commoda HOM05D006074 ORTHO05D008728 5.3e-70 269.2 363 44.1
SEGI_14685 Sequoiadendron giganteum HOM05D006074 ORTHO05D008728 6.5e-68 262.3 184 65.8
Lsat_1_v5_gn_4_177220 Lactuca sativa HOM05D006074 ORTHO05D008728 8.0e-66 255.4 184 69.6
Pp3c1_20750 Physcomitrium patens HOM05D006074 ORTHO05D020966 9.1e-62 241.9 412 38.1
Pp3c1_20753 Physcomitrium patens HOM05D006074 ORTHO05D020966 9.1e-62 241.9 412 38.1
Pp3c2_18540 Physcomitrium patens HOM05D006074 ORTHO05D020966 3.8e-60 236.5 416 35.3
Cre05.g248250 Chlamydomonas reinhardtii HOM05D006074 ORTHO05D008728 2.3e-57 227.3 503 35.0
CARHR151760 Cardamine hirsuta HOM05D006074 ORTHO05D008728 9.8e-56 221.9 222 52.7
PRCOL_00003957 Prasinoderma coloniale HOM05D006074 ORTHO05D008728 1.2e-50 204.9 400 37.0
Pp3c10_2120 Physcomitrium patens HOM05D006074 ORTHO05D020966 5.7e-48 196.1 517 28.4
Haze_18216 Corylus avellana HOM05D000132 ORTHO05D000058 4.3e-43 179.9 208 50.5
Lsat_1_v5_gn_0_26800 Lactuca sativa HOM05D006074 ORTHO05D008728 5.4e-38 162.9 153 51.0
Lsat_1_v5_gn_3_53141 Lactuca sativa HOM05D006074 ORTHO05D008728 2.3e-33 147.5 127 53.5
Atru.chr3.96 Acer truncatum HOM05D006074 ORTHO05D026256 8.9e-17 92.4 69 69.6
Pp3c20_4730 Physcomitrium patens HOM05D006074 ORTHO05D026055 2.0e-16 91.3 170 37.1
Sabra17G0081400 Salix brachista HOM05D006074 ORTHO05D008728 4.4e-16 90.1 71 64.8
CDE02G1972 Ceratophyllum demersum HOM05D006074 ORTHO05D026256 7.6e-16 89.4 69 66.7
PGSC0003DMG400013970 Solanum tuberosum HOM05D006074 ORTHO05D008728 7.6e-16 89.4 61 63.9
Actinidia17537 Actinidia chinensis HOM05D006074 ORTHO05D026256 1.3e-15 88.6 69 69.6
Pp3c23_20410 Physcomitrium patens HOM05D006074 ORTHO05D026055 1.3e-15 88.6 176 32.4
Pp3c8_20190 Physcomitrium patens HOM05D006074 ORTHO05D026055 8.4e-15 85.9 170 32.4
Pp3c20_10280 Physcomitrium patens HOM05D006074 ORTHO05D026055 1.6e-13 81.6 170 32.9
HanXRQChr09g0253281 Helianthus annuus HOM05D006074 ORTHO05D008728 1.4e-09 68.6 51 70.6
SEGI_18941 Sequoiadendron giganteum HOM05D006074 ORTHO05D026256 9.3e-06 55.8 49 59.2


User provided reference genes

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