Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Eucgr.J01039 Eucalyptus grandis HOM05D005913 ORTHO05D007138 2.6e-144 515.4 263 100.0
TWI31G0765 Tripterygium wilfordii HOM05D005913 ORTHO05D007138 7.2e-86 321.2 265 62.6
QL05p072708 Quercus lobata HOM05D005913 ORTHO05D007138 2.7e-85 319.3 266 65.4
CiPaw.13G076700 Carya illinoinensis HOM05D005913 ORTHO05D007138 2.3e-84 316.2 267 64.8
Hma1.2p1_1287F.1_g273300 Hydrangea macrophylla HOM05D005913 ORTHO05D007138 2.4e-81 306.2 272 64.0
CSS0006724 Camellia sinensis var. sinensis HOM05D005913 ORTHO05D007138 5.3e-81 305.1 261 63.2
TAR633G1775 Trochodendron aralioides HOM05D005913 ORTHO05D007138 5.3e-81 305.1 259 64.1
Prupe.6G056500 Prunus persica HOM05D005913 ORTHO05D007138 7.0e-81 304.7 263 62.0
Rhsim01G0236700 Rhododendron simsii HOM05D005913 ORTHO05D007138 7.0e-81 304.7 256 65.2
Oeu008301.1 Olea europaea HOM05D005913 ORTHO05D007138 1.2e-80 303.9 259 63.7
Duzib150G0854 Durio zibethinus HOM05D005913 ORTHO05D007138 1.7e-79 300.1 266 62.0
Sed0020527 Sechium edule HOM05D005913 ORTHO05D007138 3.8e-79 298.9 263 61.2
Nn2g15825 Nelumbo nucifera HOM05D005913 ORTHO05D007138 1.1e-78 297.4 265 60.8
CsaV3_6G016190 Cucumis sativus L. HOM05D005913 ORTHO05D007138 1.5e-78 297.0 259 63.7
RcHm_v2.0_Chr5g0069871 Rosa chinensis HOM05D005913 ORTHO05D007138 3.6e-77 292.4 266 59.4
CSS0022052 Camellia sinensis var. sinensis HOM05D005913 ORTHO05D007138 4.7e-77 292.0 219 68.9
Cpa.g.sc112.8 Carica papaya HOM05D005913 ORTHO05D007138 4.7e-77 292.0 261 62.1
GSVIVG01024730001 Vitis vinifera HOM05D005913 ORTHO05D007138 6.1e-77 291.6 255 63.1
MD11G1073200 Malus domestica HOM05D005913 ORTHO05D007138 1.8e-76 290.0 267 61.0
Cfa011705 Carpinus fangiana HOM05D005913 ORTHO05D007138 6.8e-76 288.1 272 60.7
MELO3C025845.2 Cucumis melo HOM05D005913 ORTHO05D007138 5.7e-75 285.0 279 59.1
Dinv28648 Davidia involucrata HOM05D005913 ORTHO05D007138 7.5e-75 284.6 267 59.2
FAN11G0587 Fragaria x ananassa HOM05D005913 ORTHO05D007138 1.3e-74 283.9 265 57.7
Lsat_1_v5_gn_9_20000 Lactuca sativa HOM05D005913 ORTHO05D007138 1.3e-74 283.9 256 60.2
Nitab4.5_0000037g0040 Nicotiana tabacum HOM05D005913 ORTHO05D007138 6.3e-74 281.6 221 67.0
Sc21g0006380 Simmondsia chinensis HOM05D005913 ORTHO05D007138 6.3e-74 281.6 260 60.0
Sc21g0006400 Simmondsia chinensis HOM05D005913 ORTHO05D007138 8.3e-74 281.2 260 60.0
Thecc.09G300200 Theobroma cacao HOM05D005913 ORTHO05D007138 1.1e-73 280.8 267 58.4
FAN21G0630 Fragaria x ananassa HOM05D005913 ORTHO05D007138 1.8e-73 280.0 265 57.4
FAN25G2063 Fragaria x ananassa HOM05D005913 ORTHO05D007138 2.4e-73 279.6 265 57.0
Peaxi162Scf00228g00514 Petunia axillaris HOM05D000044 ORTHO05D007138 7.0e-73 278.1 221 66.5
Ciclev10029073m.g Citrus clementina HOM05D005913 ORTHO05D007138 1.2e-72 277.3 266 58.6
MSTRG.24154 Avicennia marina HOM05D005913 ORTHO05D007138 1.6e-72 276.9 256 60.9
Dinv25093 Davidia involucrata HOM05D005913 ORTHO05D007138 3.5e-72 275.8 267 60.7
FvH4_3g38720 Fragaria vesca HOM05D005913 ORTHO05D007138 3.5e-72 275.8 265 56.6
PGSC0003DMG400016288 Solanum tuberosum HOM05D005913 ORTHO05D007138 3.5e-72 275.8 261 60.9
CAN.G324.3 Capsicum annuum HOM05D005913 ORTHO05D007138 1.0e-71 274.2 260 58.8
Manes.10G106300 Manihot esculenta HOM05D005913 ORTHO05D007138 1.0e-71 274.2 269 57.6
Solyc10g084700.2 Solanum lycopersicum HOM05D005913 ORTHO05D007138 1.0e-71 274.2 261 59.8
CANSAT56G2716 Cannabis sativa HOM05D005913 ORTHO05D007138 2.3e-71 273.1 253 60.5
vmacro14595 Vaccinium macrocarpon HOM05D005913 ORTHO05D007138 2.9e-71 272.7 238 63.4
Sopen10g034140 Solanum pennellii HOM05D005913 ORTHO05D007138 6.5e-71 271.6 261 59.8
SGA_v2.0_scaffold25G11107 Striga asiatica HOM05D005913 ORTHO05D007138 8.6e-71 271.2 259 58.3
Gohir.D13G228900 Gossypium hirsutum HOM05D005913 ORTHO05D007138 1.9e-70 270.0 259 57.9
PGSC0003DMG402011001 Solanum tuberosum HOM05D005913 ORTHO05D007138 2.5e-70 269.6 261 58.6
ECA247G1367 Erigeron canadensis HOM05D005913 ORTHO05D007138 3.2e-70 269.2 259 57.5
Gorai.013G259900 Gossypium raimondii HOM05D005913 ORTHO05D007138 3.2e-70 269.2 259 57.9
Lalb_Chr19g0128221 Lupinus albus HOM05D005913 ORTHO05D007138 3.2e-70 269.2 265 56.6
HanXRQChr16g0518331 Helianthus annuus HOM05D005913 ORTHO05D007138 4.2e-70 268.9 256 60.5
Haze_24336 Corylus avellana HOM05D005913 ORTHO05D007138 1.4e-68 263.8 347 47.6
FAN16G2194 Fragaria x ananassa HOM05D005913 ORTHO05D007138 4.0e-68 262.3 266 55.3
PGR044G1475 Punica granatum HOM05D005913 ORTHO05D007138 4.0e-68 262.3 221 62.0
AUR62020144 Chenopodium quinoa HOM05D005913 ORTHO05D007138 6.8e-68 261.5 255 56.5
AUR62001638 Chenopodium quinoa HOM05D005913 ORTHO05D007138 1.2e-67 260.8 251 57.0
TAR369G0609 Trochodendron aralioides HOM05D005913 ORTHO05D007138 1.2e-67 260.8 243 60.1
Migut.N03298 Erythranthe guttata HOM05D005913 ORTHO05D007138 2.6e-67 259.6 256 58.2
Cc01_g14290 Coffea canephora HOM05D005913 ORTHO05D007138 5.7e-67 258.5 213 65.3
Glyma.05G235600 Glycine max HOM05D005913 ORTHO05D007138 7.5e-67 258.1 265 55.8
ATR0681G105 Amborella trichopoda HOM05D005913 ORTHO05D007138 2.2e-66 256.5 253 57.3
Hund09257 Selenicereus undatus HOM05D005913 ORTHO05D007138 2.2e-66 256.5 265 55.8
Gohir.A13G224200 Gossypium hirsutum HOM05D005913 ORTHO05D007138 2.8e-66 256.1 258 57.8
Lj3A585T46 Lonicera japonica HOM05D005913 ORTHO05D007138 4.9e-66 255.4 229 61.6
Sabra06G0131300 Salix brachista HOM05D005913 ORTHO05D007138 8.3e-66 254.6 257 56.8
Potri.006G170500 Populus trichocarpa HOM05D005913 ORTHO05D007138 5.4e-65 251.9 257 58.0
QL01p038500 Quercus lobata HOM05D005913 ORTHO05D007138 4.5e-64 248.8 217 63.6
VMungo0647G0764 Vigna mungo HOM05D005913 ORTHO05D007138 6.6e-63 245.0 252 56.7
arahy.Tifrunner.gnm1.ann1.6RYY2X Arachis hypogaea HOM05D005913 ORTHO05D007138 1.5e-62 243.8 244 57.0
LjContig00155g0009730 Lotus japonicus HOM05D005913 ORTHO05D007138 1.5e-62 243.8 252 55.6
PSO801G0017 Papaver somniferum HOM05D005913 ORTHO05D007138 7.3e-62 241.5 252 54.4
Ca_09509_v3 Cicer arietinum L. HOM05D000390 ORTHO05D007138 1.6e-61 240.4 263 52.9
Ca_30058_v3 Cicer arietinum L. HOM05D000390 ORTHO05D007138 1.6e-61 240.4 263 52.9
PSO675G7356 Papaver somniferum HOM05D005913 ORTHO05D007138 2.8e-61 239.6 252 52.8
Psat3g002480 Pisum sativum HOM05D005913 ORTHO05D007138 3.6e-61 239.2 252 54.8
PSO339G4526 Papaver somniferum HOM05D005913 ORTHO05D007138 6.1e-61 238.4 252 53.6
Peaxi162Scf00384g00045 Petunia axillaris HOM05D005913 ORTHO05D007138 8.0e-61 238.0 260 54.2
Medtr7g117410 Medicago truncatula HOM05D005913 ORTHO05D007138 2.3e-60 236.5 216 59.3
Aqoxy4G02545 Aquilegia oxysepala HOM05D005913 ORTHO05D007138 3.0e-60 236.1 261 54.0
DCAR_002129 Daucus carota HOM05D005913 ORTHO05D007138 8.9e-60 234.6 268 54.1
CDE04G2145 Ceratophyllum demersum HOM05D005913 ORTHO05D007138 1.7e-58 230.3 210 62.9
DCAR_012499 Daucus carota HOM05D005913 ORTHO05D007138 1.8e-57 226.9 233 57.1
COL.COLO4_19170 Corchorus olitorius HOM05D005913 ORTHO05D001548 2.4e-57 226.5 245 53.9
Phvul.001G033300 Phaseolus vulgaris HOM05D005913 ORTHO05D007138 1.2e-56 224.2 305 49.2
EL10Ac7g16180 Beta vulgaris HOM05D005913 ORTHO05D007138 3.5e-56 222.6 264 50.8
HPP92_028632 Vanilla planifolia HOM05D005913 ORTHO05D007138 1.1e-54 217.6 222 55.4
Ah.15g099480 Amaranthus hybridus HOM05D005913 ORTHO05D007138 1.8e-52 210.3 254 50.4
Actinidia16099 Actinidia chinensis HOM05D005913 ORTHO05D007138 2.3e-52 209.9 213 55.9
CDE04G2770 Ceratophyllum demersum HOM05D005913 ORTHO05D007138 5.8e-51 205.3 209 59.8
Lj4A493T9 Lonicera japonica HOM05D005913 ORTHO05D007138 6.4e-50 201.8 238 50.8
HPP92_002930 Vanilla planifolia HOM05D005913 ORTHO05D007138 8.3e-50 201.4 214 54.2
Thhalv10008508m.g Eutrema salsugineum HOM05D005913 ORTHO05D007138 2.4e-49 199.9 265 47.2
CARHR006930 Cardamine hirsuta HOM05D005913 ORTHO05D007138 7.8e-48 194.9 257 47.1
A10p05770 Brassica napus HOM05D005913 ORTHO05D007138 1.7e-47 193.7 270 46.3
BraA10t42838Z Brassica rapa HOM05D005913 ORTHO05D007138 1.7e-47 193.7 270 46.3
Sp1g05970 Schrenkiella parvula HOM05D005913 ORTHO05D007138 6.6e-47 191.8 262 46.6
Carub.0001s0651 Capsella rubella HOM05D005913 ORTHO05D007138 4.3e-46 189.1 260 47.3
AT1G07210 Arabidopsis thaliana HOM05D005913 ORTHO05D007138 2.8e-45 186.4 263 45.2
Zm00001eb012770 Zea mays HOM05D005913 ORTHO05D007138 4.7e-45 185.7 240 46.2
Os10g0500500 Oryza sativa ssp. japonica HOM05D005913 ORTHO05D007138 4.0e-44 182.6 213 51.2
BraA09t41996Z Brassica rapa HOM05D005913 ORTHO05D007138 6.8e-44 181.8 254 46.5
C05p05290 Brassica napus HOM05D005913 ORTHO05D007138 8.9e-44 181.4 245 47.3
BolC5t29300H Brassica oleracea HOM05D005913 ORTHO05D007138 8.9e-44 181.4 245 47.3
Aa31LG1G6450 Aethionema arabicum HOM05D005913 ORTHO05D007138 1.2e-43 181.0 235 47.2
BolC8t52604H Brassica oleracea HOM05D005913 ORTHO05D007138 2.0e-43 180.3 254 45.3
AL1G17350 Arabidopsis lyrata HOM05D005913 ORTHO05D007138 3.4e-43 179.5 263 44.1
C08p50760 Brassica napus HOM05D005913 ORTHO05D007138 3.4e-43 179.5 269 44.2
SalBow6G3913 Salvia bowleyana HOM05D005913 ORTHO05D007138 3.4e-43 179.5 344 38.4
BcaC07g42020 Brassica carinata HOM05D005913 ORTHO05D007138 1.3e-42 177.6 269 43.9
A09p66580 Brassica napus HOM05D005913 ORTHO05D007138 1.7e-42 177.2 254 45.3
Zm00001eb142300 Zea mays HOM05D005913 ORTHO05D007138 3.2e-41 172.9 165 56.4
BcaC07g42452 Brassica carinata HOM05D005913 ORTHO05D007138 1.3e-39 167.5 164 56.1
MD03G1068700 Malus domestica HOM05D005913 ORTHO05D007138 1.6e-37 160.6 93 88.2
unitig_26.g9973 Utricularia gibba HOM05D005913 ORTHO05D007138 2.8e-37 159.8 113 72.6
TPR.G37238 Trifolium pratense HOM05D005913 ORTHO05D007138 5.4e-33 145.6 224 43.8
Atru.chr3.4201 Acer truncatum HOM05D005913 ORTHO05D007138 7.1e-33 145.2 174 50.6
BcaC07g42451 Brassica carinata HOM05D005913 ORTHO05D007138 3.9e-31 139.4 97 71.1
BcaB07g33371 Brassica carinata HOM05D005913 ORTHO05D007138 8.1e-29 131.7 157 47.1
TPR.G4738 Trifolium pratense HOM05D005913 ORTHO05D007138 8.4e-26 121.7 174 43.1
SEGI_23907 Sequoiadendron giganteum HOM05D005913 ORTHO05D007138 3.2e-25 119.8 171 45.0
ClCG02G019520 Citrullus lanatus HOM05D005913 ORTHO05D007138 7.1e-25 118.6 178 42.1
arahy.Tifrunner.gnm1.ann1.6CR394 Arachis hypogaea HOM05D005913 ORTHO05D007138 1.6e-24 117.5 73 80.8
TPR.G3936 Trifolium pratense HOM05D005913 ORTHO05D007138 3.5e-24 116.3 72 80.6
Pp3c9_1670 Physcomitrium patens HOM05D005913 ORTHO05D007138 3.3e-22 109.8 209 38.3
MD03G1068600 Malus domestica HOM05D005913 ORTHO05D007138 1.4e-20 104.4 122 50.8
Mapoly0046s0093 Marchantia polymorpha HOM05D005913 ORTHO05D007138 1.8e-20 104.0 220 35.9
SEGI_13957 Sequoiadendron giganteum HOM05D005913 ORTHO05D007138 2.6e-19 100.1 72 69.4
AagrBONN_evm.TU.Sc2ySwM_362.942 Anthoceros agrestis HOM05D005913 ORTHO05D007138 2.9e-18 96.7 214 34.1
Atru.chr3.4202 Acer truncatum HOM05D005913 ORTHO05D007138 9.3e-17 91.7 55 81.8
SHI19145 Sapria himalayana HOM05D000002 ORTHO05D000001 4.6e-16 89.4 127 39.4
Solyc01g058530.4 Solanum lycopersicum HOM05D005913 ORTHO05D007138 5.6e-14 82.4 63 65.1
Peaxi162Scf00378g00212 Petunia axillaris HOM05D000011 ORTHO05D010520 1.3e-13 81.3 48 89.6
CBR_g41534 Chara braunii HOM05D005913 ORTHO05D007138 1.2e-08 64.7 66 50.0
TPR.G39004 Trifolium pratense HOM05D006629 ORTHO05D008430 7.9e-08 62.0 140 37.1
CARHR102160 Cardamine hirsuta HOM05D005913 ORTHO05D007138 1.0e-07 61.6 89 43.8


User provided reference genes

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