Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Eucgr.J01033 Eucalyptus grandis HOM05D005304 ORTHO05D004438 2.1e-59 232.3 126 100.0
RcHm_v2.0_Chr1g0336411 Rosa chinensis HOM05D005304 ORTHO05D004438 3.2e-15 85.5 90 54.4
PGR044G1405 Punica granatum HOM05D005304 ORTHO05D004438 5.4e-15 84.7 57 68.4
FAN03G1417 Fragaria x ananassa HOM05D005304 ORTHO05D004438 9.3e-15 84.0 88 54.5
FAN10G0320 Fragaria x ananassa HOM05D005304 ORTHO05D004438 9.3e-15 84.0 89 51.7
QL03p021677 Quercus lobata HOM05D005304 ORTHO05D004438 1.2e-14 83.6 110 45.5
FvH4_7g06790 Fragaria vesca HOM05D005304 ORTHO05D004438 2.1e-14 82.8 87 51.7
FAN06G1004 Fragaria x ananassa HOM05D005304 ORTHO05D004438 2.1e-14 82.8 87 51.7
FAN10G3090 Fragaria x ananassa HOM05D005304 ORTHO05D004438 2.1e-14 82.8 87 51.7
Potri.008G029600 Populus trichocarpa HOM05D005304 ORTHO05D004438 2.7e-14 82.4 102 45.1
Sabra08G0019800 Salix brachista HOM05D005304 ORTHO05D004438 6.0e-14 81.3 103 45.6
Oeu059829.1 Olea europaea HOM05D005304 ORTHO05D004438 7.9e-14 80.9 105 46.7
QL03p011649 Quercus lobata HOM05D005304 ORTHO05D004438 7.9e-14 80.9 110 44.5
FAN12G4274 Fragaria x ananassa HOM05D005304 ORTHO05D004438 1.0e-13 80.5 87 52.9
Gohir.D01G118400 Gossypium hirsutum HOM05D005304 ORTHO05D004438 1.0e-13 80.5 77 54.5
Gorai.002G144400 Gossypium raimondii HOM05D005304 ORTHO05D004438 1.0e-13 80.5 77 54.5
FAN01G2164 Fragaria x ananassa HOM05D005304 ORTHO05D004438 1.3e-13 80.1 88 53.4
FAN02G4580 Fragaria x ananassa HOM05D005304 ORTHO05D004438 3.0e-13 79.0 87 50.6
Potri.010G231600 Populus trichocarpa HOM05D005304 ORTHO05D004438 3.9e-13 78.6 105 43.8
Rhsim03G0110900 Rhododendron simsii HOM05D005304 ORTHO05D004438 3.9e-13 78.6 101 47.5
Gohir.A01G128800 Gossypium hirsutum HOM05D005304 ORTHO05D004438 5.1e-13 78.2 77 53.2
Manes.07G093500 Manihot esculenta HOM05D005304 ORTHO05D004438 8.7e-13 77.4 101 42.6
SalBow4G2705 Salvia bowleyana HOM05D005304 ORTHO05D004438 8.7e-13 77.4 68 54.4
CiPaw.02G169800 Carya illinoinensis HOM05D005304 ORTHO05D004438 1.1e-12 77.0 102 43.1
Duzib114G0655 Durio zibethinus HOM05D005304 ORTHO05D004438 1.1e-12 77.0 102 43.1
Manes.10G053200 Manihot esculenta HOM05D005304 ORTHO05D004438 1.5e-12 76.6 57 59.6
Cfa001771 Carpinus fangiana HOM05D005304 ORTHO05D004438 2.5e-12 75.9 54 70.4
CiPaw.01G264700 Carya illinoinensis HOM05D005304 ORTHO05D004438 2.5e-12 75.9 105 44.8
TAR636G3524 Trochodendron aralioides HOM05D005304 ORTHO05D004438 2.5e-12 75.9 89 46.1
Duzib128G0830 Durio zibethinus HOM05D005304 ORTHO05D004438 3.3e-12 75.5 103 45.6
QL08p052941 Quercus lobata HOM05D005304 ORTHO05D004438 3.3e-12 75.5 53 62.3
COL.COLO4_32872 Corchorus olitorius HOM05D005304 ORTHO05D004438 4.3e-12 75.1 62 54.8
Sabra10G0179600 Salix brachista HOM05D005304 ORTHO05D004438 5.6e-12 74.7 60 55.0
Potri.010G231700 Populus trichocarpa HOM05D005304 ORTHO05D004438 1.3e-11 73.6 101 44.6
CSS0003867 Camellia sinensis var. sinensis HOM05D017072 ORTHO05D004438 1.6e-11 73.2 101 44.6
Glyma.20G190800 Glycine max HOM05D005304 ORTHO05D004438 1.6e-11 73.2 58 60.3
Nn6g35176 Nelumbo nucifera HOM05D005304 ORTHO05D004438 1.6e-11 73.2 104 42.3
SalBow6G1975 Salvia bowleyana HOM05D005304 ORTHO05D004438 1.6e-11 73.2 79 51.9
CANSAT56G0274 Cannabis sativa HOM05D005304 ORTHO05D004438 2.8e-11 72.4 87 42.5
Sabra08G0019700 Salix brachista HOM05D005304 ORTHO05D004438 4.8e-11 71.6 65 49.2
Oeu032435.1 Olea europaea HOM05D005304 ORTHO05D004438 6.2e-11 71.2 105 41.9
Gohir.A05G393600 Gossypium hirsutum HOM05D005304 ORTHO05D004438 8.1e-11 70.9 77 46.8
Gorai.012G025400 Gossypium raimondii HOM05D005304 ORTHO05D004438 8.1e-11 70.9 77 46.8
Gohir.D04G021300 Gossypium hirsutum HOM05D005304 ORTHO05D004438 1.1e-10 70.5 77 46.8
Cpa.g.sc128.74 Carica papaya HOM05D005304 ORTHO05D004438 1.4e-10 70.1 100 42.0
MELO3C019852.2 Cucumis melo HOM05D005304 ORTHO05D004438 1.4e-10 70.1 61 55.7
CsaV3_2G032750 Cucumis sativus L. HOM05D005304 ORTHO05D004438 1.4e-10 70.1 61 55.7
Duzib128G0918 Durio zibethinus HOM05D005304 ORTHO05D004438 1.8e-10 69.7 102 41.2
ClCG08G007940 Citrullus lanatus HOM05D005304 ORTHO05D004438 3.1e-10 68.9 61 54.1
Migut.F01894 Erythranthe guttata HOM05D005304 ORTHO05D004438 3.1e-10 68.9 103 37.9
Manes.10G053300 Manihot esculenta HOM05D005304 ORTHO05D004438 4.0e-10 68.6 106 36.8
Haze_16785 Corylus avellana HOM05D005304 ORTHO05D004438 5.3e-10 68.2 107 44.9
Lsat_1_v5_gn_8_22700 Lactuca sativa HOM05D005304 ORTHO05D004438 5.3e-10 68.2 57 56.1
Thecc.10G090600 Theobroma cacao HOM05D005304 ORTHO05D004438 5.3e-10 68.2 102 41.2
TAR623G1332 Trochodendron aralioides HOM05D005304 ORTHO05D004438 5.3e-10 68.2 107 38.3
MSTRG.27507 Avicennia marina HOM05D005304 ORTHO05D004438 9.0e-10 67.4 54 59.3
Phvul.007G141600 Phaseolus vulgaris HOM05D005304 ORTHO05D004438 9.0e-10 67.4 58 55.2
VMungo0720G0262 Vigna mungo HOM05D005304 ORTHO05D004438 9.0e-10 67.4 58 55.2
Nitab4.5_0000107g0230 Nicotiana tabacum HOM05D005304 ORTHO05D004438 1.2e-09 67.0 101 43.6
SHI54636 Sapria himalayana HOM05D005304 ORTHO05D004438 1.2e-09 67.0 59 50.8
Sed0018085 Sechium edule HOM05D005304 ORTHO05D004438 1.2e-09 67.0 61 52.5
Lsat_1_v5_gn_9_70641 Lactuca sativa HOM05D005304 ORTHO05D004438 2.6e-09 65.9 55 52.7
Cc02_g10500 Coffea canephora HOM05D005304 ORTHO05D004438 3.4e-09 65.5 109 38.5
Glyma.10G199500 Glycine max HOM05D005304 ORTHO05D004438 3.4e-09 65.5 57 56.1
Gohir.A05G290700 Gossypium hirsutum HOM05D005304 ORTHO05D004438 7.6e-09 64.3 104 43.3
Lalb_Chr06g0170051 Lupinus albus HOM05D005304 ORTHO05D004438 7.6e-09 64.3 89 41.6
Ciclev10033091m.g Citrus clementina HOM05D005304 ORTHO05D004438 9.9e-09 63.9 65 46.2
PGR044G0041 Punica granatum HOM05D005304 ORTHO05D004438 9.9e-09 63.9 60 56.7
Lj5g0009089 Lotus japonicus HOM05D005304 ORTHO05D004438 1.3e-08 63.5 59 54.2
Gohir.D05G291900 Gossypium hirsutum HOM05D005304 ORTHO05D004438 2.2e-08 62.8 104 42.3
Gorai.009G307700 Gossypium raimondii HOM05D005304 ORTHO05D004438 2.2e-08 62.8 104 43.3
Ca_10460_v3 Cicer arietinum L. HOM05D005304 ORTHO05D004438 2.9e-08 62.4 58 53.4
TAR633G0523 Trochodendron aralioides HOM05D005304 ORTHO05D004438 2.9e-08 62.4 58 46.6
TWI63G0695 Tripterygium wilfordii HOM05D005304 ORTHO05D004438 4.9e-08 61.6 104 37.5
Psat6g173960 Pisum sativum HOM05D005304 ORTHO05D004438 6.4e-08 61.2 89 42.7
Sed0010031 Sechium edule HOM05D005304 ORTHO05D004438 6.4e-08 61.2 69 44.9
TPR.G37843 Trifolium pratense HOM05D005304 ORTHO05D004438 6.4e-08 61.2 65 50.8
Prupe.2G095100 Prunus persica HOM05D005304 ORTHO05D004438 1.1e-07 60.5 71 46.5
Manes.11G153500 Manihot esculenta HOM05D005304 ORTHO05D004438 1.4e-07 60.1 59 44.1
TAR369G0323 Trochodendron aralioides HOM05D001401 ORTHO05D002222 1.4e-07 60.1 102 40.2
Duzib168G0406 Durio zibethinus HOM05D005304 ORTHO05D004438 1.9e-07 59.7 56 48.2
TWI38G0392 Tripterygium wilfordii HOM05D005304 ORTHO05D004438 1.9e-07 59.7 101 37.6
ClCG05G021460 Citrullus lanatus HOM05D005304 ORTHO05D004438 2.4e-07 59.3 58 48.3
CSS0028161 Camellia sinensis var. sinensis HOM05D005304 ORTHO05D004438 3.2e-07 58.9 70 42.9
Medtr1g090837 Medicago truncatula HOM05D005304 ORTHO05D004438 3.2e-07 58.9 57 52.6
QL01p014739 Quercus lobata HOM05D005304 ORTHO05D004438 3.2e-07 58.9 68 44.1
SEGI_13512 Sequoiadendron giganteum HOM05D018057 ORTHO05D012767 3.2e-07 58.9 64 45.3
SEGI_20981 Sequoiadendron giganteum HOM05D018057 ORTHO05D012767 3.2e-07 58.9 64 45.3
Solyc03g071710.1 Solanum lycopersicum HOM05D005304 ORTHO05D004438 3.2e-07 58.9 104 41.3
Sopen03g019970 Solanum pennellii HOM05D005304 ORTHO05D004438 3.2e-07 58.9 104 41.3
Duzib150G0717 Durio zibethinus HOM05D005304 ORTHO05D004438 5.5e-07 58.2 57 45.6
Eucgr.J01032 Eucalyptus grandis HOM05D005304 ORTHO05D004438 5.5e-07 58.2 77 44.2
Lalb_Chr02g0151151 Lupinus albus HOM05D005304 ORTHO05D004438 5.5e-07 58.2 56 48.2
Aqoxy2G01602 Aquilegia oxysepala HOM05D005304 ORTHO05D004438 7.1e-07 57.8 58 48.3
Gohir.A05G084500 Gossypium hirsutum HOM05D005304 ORTHO05D004438 7.1e-07 57.8 57 45.6
Gohir.D05G087300 Gossypium hirsutum HOM05D005304 ORTHO05D004438 7.1e-07 57.8 57 45.6
Gorai.009G089100 Gossypium raimondii HOM05D005304 ORTHO05D004438 7.1e-07 57.8 57 45.6
PGSC0003DMG400023483 Solanum tuberosum HOM05D005304 ORTHO05D004438 7.1e-07 57.8 67 49.3
Atru.chr12.921 Acer truncatum HOM05D005304 ORTHO05D004438 9.3e-07 57.4 59 45.8
CAN.G612.11 Capsicum annuum HOM05D005304 ORTHO05D004438 9.3e-07 57.4 98 40.8
Gohir.A07G105600 Gossypium hirsutum HOM05D005304 ORTHO05D004438 9.3e-07 57.4 55 45.5
PGSC0003DMG400016914 Solanum tuberosum HOM05D005304 ORTHO05D004438 9.3e-07 57.4 108 41.7
Thecc.09G296200 Theobroma cacao HOM05D005304 ORTHO05D004438 9.3e-07 57.4 56 46.4
Migut.F01597 Erythranthe guttata HOM05D005304 ORTHO05D004438 1.2e-06 57.0 82 40.2
Nn2g13894 Nelumbo nucifera HOM05D005304 ORTHO05D004438 1.2e-06 57.0 105 41.0
SEGI_05316 Sequoiadendron giganteum HOM05D018057 ORTHO05D004438 1.2e-06 57.0 68 44.1
Solyc11g007860.1 Solanum lycopersicum HOM05D005304 ORTHO05D004438 1.2e-06 57.0 57 47.4
CSS0034177 Camellia sinensis var. sinensis HOM05D005304 ORTHO05D004438 1.6e-06 56.6 100 41.0
DCAR_019059 Daucus carota HOM05D005304 ORTHO05D004438 1.6e-06 56.6 63 46.0
Sopen05g033870 Solanum pennellii HOM05D005304 ORTHO05D004438 1.6e-06 56.6 69 44.9
TWI79G0532 Tripterygium wilfordii HOM05D005304 ORTHO05D004438 1.6e-06 56.6 66 43.9
Lalb_Chr03g0036331 Lupinus albus HOM05D005304 ORTHO05D004438 2.1e-06 56.2 101 38.6
PGSC0003DMG400027330 Solanum tuberosum HOM05D005304 ORTHO05D004438 2.1e-06 56.2 68 44.1
Gohir.D07G109600 Gossypium hirsutum HOM05D005304 ORTHO05D004438 2.7e-06 55.8 57 43.9
Sed0009329 Sechium edule HOM05D005304 ORTHO05D004438 2.7e-06 55.8 51 49.0
Sopen11g003720 Solanum pennellii HOM05D005304 ORTHO05D004438 2.7e-06 55.8 68 42.6
MELO3C012381.2 Cucumis melo HOM05D005304 ORTHO05D004438 3.5e-06 55.5 52 46.2
CsaV3_5G035790 Cucumis sativus L. HOM05D005304 ORTHO05D004438 3.5e-06 55.5 66 42.4
Nitab4.5_0000593g0370 Nicotiana tabacum HOM05D005304 ORTHO05D004438 4.6e-06 55.1 109 39.4
Prupe.6G114400 Prunus persica HOM05D005304 ORTHO05D004438 4.6e-06 55.1 96 37.5
CiPaw.14G106000 Carya illinoinensis HOM05D005304 ORTHO05D004438 7.9e-06 54.3 61 39.3


User provided reference genes

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