Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Eucgr.J01032 Eucalyptus grandis HOM05D005304 ORTHO05D004438 1.1e-64 250.0 145 100.0
PGR044G0041 Punica granatum HOM05D005304 ORTHO05D004438 2.9e-12 75.9 107 47.7
Prupe.2G095100 Prunus persica HOM05D005304 ORTHO05D004438 5.5e-11 71.6 53 67.9
Eucgr.G02732 Eucalyptus grandis HOM05D005304 ORTHO05D004438 7.9e-10 67.8 77 50.6
Nn6g35176 Nelumbo nucifera HOM05D005304 ORTHO05D004438 7.9e-10 67.8 72 52.8
CiPaw.02G169800 Carya illinoinensis HOM05D005304 ORTHO05D004438 1.0e-09 67.4 57 54.4
PGR119G0321 Punica granatum HOM05D005304 ORTHO05D004438 1.0e-09 67.4 57 54.4
CSS0003867 Camellia sinensis var. sinensis HOM05D017072 ORTHO05D004438 1.8e-09 66.6 61 52.5
PGR142G4012 Punica granatum HOM05D005304 ORTHO05D016259 1.8e-09 66.6 66 54.5
QL08p052941 Quercus lobata HOM05D005304 ORTHO05D004438 1.8e-09 66.6 54 59.3
Cpa.g.sc128.74 Carica papaya HOM05D005304 ORTHO05D004438 5.1e-09 65.1 102 41.2
Haze_16785 Corylus avellana HOM05D005304 ORTHO05D004438 6.7e-09 64.7 82 46.3
TWI63G0695 Tripterygium wilfordii HOM05D005304 ORTHO05D004438 6.7e-09 64.7 114 42.1
TAR623G1332 Trochodendron aralioides HOM05D005304 ORTHO05D004438 6.7e-09 64.7 74 47.3
QL03p021677 Quercus lobata HOM05D005304 ORTHO05D004438 8.8e-09 64.3 54 59.3
CSS0034177 Camellia sinensis var. sinensis HOM05D005304 ORTHO05D004438 1.5e-08 63.5 56 55.4
Lsat_1_v5_gn_9_70641 Lactuca sativa HOM05D005304 ORTHO05D004438 1.5e-08 63.5 75 50.7
Cfa001771 Carpinus fangiana HOM05D005304 ORTHO05D004438 2.0e-08 63.2 56 57.1
Manes.07G093500 Manihot esculenta HOM05D005304 ORTHO05D004438 2.0e-08 63.2 58 53.4
Potri.009G003400 Populus trichocarpa HOM05D005304 ORTHO05D004438 2.0e-08 63.2 72 48.6
Sabra08G0019700 Salix brachista HOM05D005304 ORTHO05D004438 2.0e-08 63.2 63 54.0
PGR044G1405 Punica granatum HOM05D005304 ORTHO05D004438 2.5e-08 62.8 54 61.1
Rhsim03G0110900 Rhododendron simsii HOM05D005304 ORTHO05D004438 2.5e-08 62.8 118 36.4
Glyma.20G190800 Glycine max HOM05D005304 ORTHO05D004438 3.3e-08 62.4 74 41.9
Potri.008G029600 Populus trichocarpa HOM05D005304 ORTHO05D004438 3.3e-08 62.4 73 45.2
CsaV3_5G035790 Cucumis sativus L. HOM05D005304 ORTHO05D004438 4.3e-08 62.0 80 46.2
FAN12G4274 Fragaria x ananassa HOM05D005304 ORTHO05D004438 4.3e-08 62.0 72 55.6
Manes.11G153500 Manihot esculenta HOM05D005304 ORTHO05D004438 4.3e-08 62.0 65 50.8
QL03p011649 Quercus lobata HOM05D005304 ORTHO05D004438 5.7e-08 61.6 54 57.4
Sabra08G0019800 Salix brachista HOM05D005304 ORTHO05D004438 5.7e-08 61.6 65 49.2
CiPaw.01G264700 Carya illinoinensis HOM05D005304 ORTHO05D004438 7.4e-08 61.2 54 57.4
ClCG08G007940 Citrullus lanatus HOM05D005304 ORTHO05D004438 7.4e-08 61.2 108 37.0
FAN10G0320 Fragaria x ananassa HOM05D005304 ORTHO05D004438 7.4e-08 61.2 78 52.6
Manes.10G053200 Manihot esculenta HOM05D005304 ORTHO05D004438 7.4e-08 61.2 75 48.0
Sabra10G0179600 Salix brachista HOM05D005304 ORTHO05D004438 7.4e-08 61.2 81 44.4
TWI38G0392 Tripterygium wilfordii HOM05D005304 ORTHO05D004438 9.7e-08 60.8 74 44.6
CSS0028161 Camellia sinensis var. sinensis HOM05D005304 ORTHO05D004438 1.3e-07 60.5 70 47.1
FAN01G2164 Fragaria x ananassa HOM05D005304 ORTHO05D004438 1.3e-07 60.5 60 60.0
Phvul.007G141600 Phaseolus vulgaris HOM05D005304 ORTHO05D004438 1.3e-07 60.5 57 54.4
FvH4_7g06790 Fragaria vesca HOM05D005304 ORTHO05D004438 2.2e-07 59.7 60 60.0
FAN03G1417 Fragaria x ananassa HOM05D005304 ORTHO05D004438 2.2e-07 59.7 60 60.0
FAN06G1004 Fragaria x ananassa HOM05D005304 ORTHO05D004438 2.2e-07 59.7 60 60.0
FAN10G3090 Fragaria x ananassa HOM05D005304 ORTHO05D004438 2.2e-07 59.7 60 60.0
Gohir.D05G087300 Gossypium hirsutum HOM05D005304 ORTHO05D004438 2.2e-07 59.7 76 46.1
ClCG05G021460 Citrullus lanatus HOM05D005304 ORTHO05D004438 2.8e-07 59.3 76 46.1
Potri.010G231700 Populus trichocarpa HOM05D005304 ORTHO05D004438 2.8e-07 59.3 56 53.6
FAN02G4580 Fragaria x ananassa HOM05D005304 ORTHO05D004438 3.7e-07 58.9 78 52.6
QL01p014739 Quercus lobata HOM05D005304 ORTHO05D004438 3.7e-07 58.9 64 45.3
VMungo0720G0262 Vigna mungo HOM05D005304 ORTHO05D004438 3.7e-07 58.9 57 52.6
Glyma.10G199500 Glycine max HOM05D005304 ORTHO05D004438 4.8e-07 58.5 56 50.0
Lsat_1_v5_gn_8_22700 Lactuca sativa HOM05D005304 ORTHO05D004438 4.8e-07 58.5 58 55.2
RcHm_v2.0_Chr1g0336411 Rosa chinensis HOM05D005304 ORTHO05D004438 4.8e-07 58.5 60 58.3
MELO3C012381.2 Cucumis melo HOM05D005304 ORTHO05D004438 6.3e-07 58.2 79 44.3
Duzib168G0406 Durio zibethinus HOM05D005304 ORTHO05D004438 6.3e-07 58.2 58 48.3
Gorai.009G089100 Gossypium raimondii HOM05D005304 ORTHO05D004438 6.3e-07 58.2 96 39.6
TAR369G0323 Trochodendron aralioides HOM05D001401 ORTHO05D002222 6.3e-07 58.2 104 37.5
TAR633G0523 Trochodendron aralioides HOM05D005304 ORTHO05D004438 8.2e-07 57.8 60 46.7
Duzib128G0830 Durio zibethinus HOM05D005304 ORTHO05D004438 1.1e-06 57.4 78 43.6
Sed0018085 Sechium edule HOM05D005304 ORTHO05D004438 1.1e-06 57.4 81 42.0
TWI79G0532 Tripterygium wilfordii HOM05D005304 ORTHO05D004438 1.1e-06 57.4 74 40.5
Atru.chr12.921 Acer truncatum HOM05D005304 ORTHO05D004438 1.4e-06 57.0 62 53.2
CiPaw.14G106000 Carya illinoinensis HOM05D005304 ORTHO05D004438 1.4e-06 57.0 80 43.8
Ciclev10029845m.g Citrus clementina HOM05D005304 ORTHO05D004438 1.4e-06 57.0 85 44.7
MELO3C035553.2 Cucumis melo HOM05D026992 ORTHO05D004438 1.4e-06 57.0 72 44.4
Oeu059829.1 Olea europaea HOM05D005304 ORTHO05D004438 1.4e-06 57.0 80 43.8
Sed0018639 Sechium edule HOM05D026992 ORTHO05D004438 1.4e-06 57.0 67 47.8
Duzib150G0717 Durio zibethinus HOM05D005304 ORTHO05D004438 1.8e-06 56.6 75 42.7
Gohir.A05G084500 Gossypium hirsutum HOM05D005304 ORTHO05D004438 1.8e-06 56.6 76 43.4
Aqoxy2G01602 Aquilegia oxysepala HOM05D005304 ORTHO05D004438 4.1e-06 55.5 56 50.0
Ca_10460_v3 Cicer arietinum L. HOM05D005304 ORTHO05D004438 4.1e-06 55.5 65 46.2
Thecc.09G296200 Theobroma cacao HOM05D005304 ORTHO05D004438 4.1e-06 55.5 75 40.0
MSTRG.27507 Avicennia marina HOM05D005304 ORTHO05D004438 5.3e-06 55.1 53 52.8
Lj5g0009089 Lotus japonicus HOM05D005304 ORTHO05D004438 5.3e-06 55.1 77 42.9
Lalb_Chr02g0151151 Lupinus albus HOM05D005304 ORTHO05D004438 5.3e-06 55.1 57 47.4
Potri.010G231600 Populus trichocarpa HOM05D005304 ORTHO05D004438 5.3e-06 55.1 73 39.7
Duzib114G0655 Durio zibethinus HOM05D005304 ORTHO05D004438 6.9e-06 54.7 73 42.5
Eucgr.J01033 Eucalyptus grandis HOM05D005304 ORTHO05D004438 6.9e-06 54.7 77 44.2
Manes.04G012000 Manihot esculenta HOM05D005304 ORTHO05D004438 9.1e-06 54.3 71 47.9
Prupe.6G114400 Prunus persica HOM05D005304 ORTHO05D004438 9.1e-06 54.3 57 47.4


User provided reference genes

Program Settings