Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Eucgr.J00947 Eucalyptus grandis HOM05D007887 ORTHO05D009725 7.1e-45 183.7 104 100.0
Cfa011356 Carpinus fangiana HOM05D007887 ORTHO05D009725 3.3e-10 68.6 108 47.2
Thecc.09G259300 Theobroma cacao HOM05D007887 ORTHO05D009725 1.3e-09 66.6 104 47.1
MD11G1131400 Malus domestica HOM05D007887 ORTHO05D009725 1.8e-08 62.8 105 46.7
CSS0013187 Camellia sinensis var. sinensis HOM05D007887 ORTHO05D009725 2.4e-08 62.4 104 45.2
Glyma.11G153796 Glycine max HOM05D007887 ORTHO05D009725 2.4e-08 62.4 50 62.0
TAR633G0435 Trochodendron aralioides HOM05D007887 ORTHO05D009725 3.1e-08 62.0 82 51.2
MD03G1112500 Malus domestica HOM05D007887 ORTHO05D009725 5.3e-08 61.2 105 44.8
Prupe.6G095800 Prunus persica HOM05D007887 ORTHO05D009725 6.9e-08 60.8 105 47.6
arahy.Tifrunner.gnm1.ann1.5EA918 Arachis hypogaea HOM05D007887 ORTHO05D009725 9.1e-08 60.5 45 64.4
CSS0010599 Camellia sinensis var. sinensis HOM05D007887 ORTHO05D009725 1.2e-07 60.1 104 44.2
Haze_23901 Corylus avellana HOM05D007887 ORTHO05D009725 1.2e-07 60.1 104 43.3
FvH4_3g33040 Fragaria vesca HOM05D007887 ORTHO05D009725 2.0e-07 59.3 85 48.2
FAN16G3357 Fragaria x ananassa HOM05D007887 ORTHO05D009725 2.0e-07 59.3 85 48.2
FAN25G1511 Fragaria x ananassa HOM05D007887 ORTHO05D009725 2.0e-07 59.3 81 50.6
Glyma.12G071500 Glycine max HOM05D007887 ORTHO05D009725 2.0e-07 59.3 44 63.6
arahy.Tifrunner.gnm1.ann1.QG78WL Arachis hypogaea HOM05D007887 ORTHO05D009725 2.6e-07 58.9 45 60.0
arahy.Tifrunner.gnm1.ann1.ZKT7Q5 Arachis hypogaea HOM05D007887 ORTHO05D009725 3.4e-07 58.5 45 62.2
Manes.11G141900 Manihot esculenta HOM05D007887 ORTHO05D009725 3.4e-07 58.5 74 48.6
Medtr4g060620 Medicago truncatula HOM05D007887 ORTHO05D009725 3.4e-07 58.5 45 60.0
Psat7g222640 Pisum sativum HOM05D007887 ORTHO05D009725 3.4e-07 58.5 45 62.2
TPR.G36408 Trifolium pratense HOM05D007887 ORTHO05D009725 3.4e-07 58.5 45 62.2
arahy.Tifrunner.gnm1.ann1.VU6S4B Arachis hypogaea HOM05D007887 ORTHO05D009725 4.5e-07 58.2 45 62.2
Manes.04G024800 Manihot esculenta HOM05D007887 ORTHO05D009725 5.9e-07 57.8 105 45.7
Gohir.A13G220700 Gossypium hirsutum HOM05D037992 ORTHO05D009725 7.7e-07 57.4 48 60.4
FAN11G2401 Fragaria x ananassa HOM05D007887 ORTHO05D009725 1.3e-06 56.6 85 47.1
CANSAT54G2812 Cannabis sativa HOM05D007887 ORTHO05D009725 2.2e-06 55.8 53 52.8
Actinidia24082 Actinidia chinensis HOM05D007887 ORTHO05D009725 2.9e-06 55.5 104 40.4
CiPaw.13G108000 Carya illinoinensis HOM05D007887 ORTHO05D009725 2.9e-06 55.5 108 43.5
Aqoxy1G00528 Aquilegia oxysepala HOM05D007887 ORTHO05D009725 3.8e-06 55.1 104 41.3
RcHm_v2.0_Chr5g0060411 Rosa chinensis HOM05D007887 ORTHO05D009725 3.8e-06 55.1 84 48.8
Lalb_Chr03g0027141 Lupinus albus HOM05D007887 ORTHO05D009725 8.5e-06 53.9 49 53.1


User provided reference genes

Program Settings