Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Eucgr.J00944 Eucalyptus grandis HOM05D006884 ORTHO05D008604 0.0e+00 1323.1 685 100.0
QL01p023227 Quercus lobata HOM05D006884 ORTHO05D008604 9.7e-276 953.4 688 71.9
Cfa011353 Carpinus fangiana HOM05D006884 ORTHO05D008604 5.3e-274 947.6 687 72.1
PGR119G0543 Punica granatum HOM05D006884 ORTHO05D008604 1.8e-269 932.6 685 70.2
Haze_23897 Corylus avellana HOM05D006884 ORTHO05D008604 1.1e-266 923.3 731 67.4
CiPaw.13G108400 Carya illinoinensis HOM05D006884 ORTHO05D008604 4.1e-266 921.4 687 69.1
GSVIVG01025156001 Vitis vinifera HOM05D006884 ORTHO05D008604 3.5e-265 918.3 690 68.6
Prupe.6G097500 Prunus persica HOM05D006884 ORTHO05D008604 8.6e-264 913.7 682 70.8
Atru.chr3.3680 Acer truncatum HOM05D006884 ORTHO05D008604 8.0e-262 907.1 692 67.5
COL.COLO4_05186 Corchorus olitorius HOM05D006884 ORTHO05D008604 2.8e-259 898.7 686 68.4
Duzib168G2304 Durio zibethinus HOM05D006884 ORTHO05D008604 1.0e-256 890.2 686 68.7
Manes.04G024400 Manihot esculenta HOM05D006884 ORTHO05D008604 1.5e-255 886.3 686 66.9
CANSAT54G0393 Cannabis sativa HOM05D006884 ORTHO05D008604 2.6e-252 875.5 688 65.8
CSS0004159 Camellia sinensis var. sinensis HOM05D006884 ORTHO05D008604 2.9e-251 872.1 681 67.1
ClCG03G002300 Citrullus lanatus HOM05D006884 ORTHO05D008604 3.2e-250 868.6 684 65.5
TWI38G0581 Tripterygium wilfordii HOM05D006884 ORTHO05D008604 2.7e-249 865.5 692 66.3
arahy.Tifrunner.gnm1.ann1.AY6ICH Arachis hypogaea HOM05D006884 ORTHO05D008604 1.0e-248 863.6 676 66.6
Actinidia07119 Actinidia chinensis HOM05D006884 ORTHO05D008604 3.9e-248 861.7 685 65.4
Gorai.013G255800 Gossypium raimondii HOM05D006884 ORTHO05D008604 8.6e-248 860.5 687 66.2
Gohir.D13G225000 Gossypium hirsutum HOM05D006884 ORTHO05D008604 1.9e-247 859.4 687 66.4
TWI38G2405 Tripterygium wilfordii HOM05D006884 ORTHO05D008604 4.3e-247 858.2 692 66.0
Gohir.A13G221000 Gossypium hirsutum HOM05D006884 ORTHO05D008604 9.5e-247 857.1 687 66.1
Hma1.2p1_0071F.1_g038150 Hydrangea macrophylla HOM05D006884 ORTHO05D008604 2.1e-246 855.9 691 66.1
Lalb_Chr01g0004191 Lupinus albus HOM05D006884 ORTHO05D008604 6.2e-246 854.4 680 66.3
MELO3C005036.2 Cucumis melo HOM05D006884 ORTHO05D008604 1.8e-245 852.8 683 64.4
RcHm_v2.0_Chr5g0060051 Rosa chinensis HOM05D006884 ORTHO05D008604 2.0e-244 849.4 687 65.5
TAR369G0310 Trochodendron aralioides HOM05D006884 ORTHO05D008604 2.0e-244 849.4 687 64.9
Lj3g0026527 Lotus japonicus HOM05D006884 ORTHO05D008604 2.9e-243 845.5 678 64.7
VMungo1127G0767 Vigna mungo HOM05D006884 ORTHO05D008604 1.9e-242 842.8 679 64.7
Psat7g223440 Pisum sativum HOM05D006884 ORTHO05D008604 4.1e-242 841.6 671 66.3
vmacro03180 Vaccinium macrocarpon HOM05D006884 ORTHO05D008604 3.5e-241 838.6 688 64.5
Phvul.011G073400 Phaseolus vulgaris HOM05D006884 ORTHO05D008604 7.8e-241 837.4 679 64.4
Potri.009G014900 Populus trichocarpa HOM05D006884 ORTHO05D008604 5.0e-240 834.7 668 65.4
TPR.G15554 Trifolium pratense HOM05D006884 ORTHO05D008604 8.6e-240 833.9 673 65.7
FvH4_3g32920 Fragaria vesca HOM05D006884 ORTHO05D008604 1.9e-239 832.8 687 64.0
Medtr4g060500 Medicago truncatula HOM05D006884 ORTHO05D008604 3.3e-239 832.0 685 64.8
DCAR_018827 Daucus carota HOM05D006884 ORTHO05D008604 3.6e-238 828.6 674 63.6
Glyma.11G154214 Glycine max HOM05D006884 ORTHO05D008604 4.7e-238 828.2 687 63.8
FAN11G3181 Fragaria x ananassa HOM05D006884 ORTHO05D008604 1.5e-236 823.2 687 63.5
Aqoxy4G03234 Aquilegia oxysepala HOM05D006884 ORTHO05D008604 2.0e-236 822.8 694 63.8
Solyc11g069170.2 Solanum lycopersicum HOM05D006884 ORTHO05D008604 3.4e-236 822.0 682 62.0
Ciclev10027944m.g Citrus clementina HOM05D006884 ORTHO05D008604 7.5e-236 820.8 673 63.9
Sopen11g027910 Solanum pennellii HOM05D006884 ORTHO05D008604 1.7e-235 819.7 682 62.0
FAN25G2544 Fragaria x ananassa HOM05D006884 ORTHO05D008604 3.2e-234 815.5 684 63.3
Lj2C1032T7 Lonicera japonica HOM05D006884 ORTHO05D008604 7.1e-234 814.3 712 61.9
Sed0010984 Sechium edule HOM05D006884 ORTHO05D008604 2.3e-232 809.3 682 62.5
PGSC0003DMG400008066 Solanum tuberosum HOM05D006884 ORTHO05D008604 1.6e-230 803.1 725 58.3
Oeu005901.1 Olea europaea HOM05D006884 ORTHO05D008604 1.8e-229 799.7 707 60.0
Cpa.g.sc139.78 Carica papaya HOM05D006884 ORTHO05D008604 5.2e-229 798.1 600 69.0
Peaxi162Scf00351g00322 Petunia axillaris HOM05D006884 ORTHO05D008604 8.9e-229 797.3 701 59.5
Cc01_g11430 Coffea canephora HOM05D006884 ORTHO05D008604 1.7e-227 793.1 685 60.9
Nitab4.5_0000999g0100 Nicotiana tabacum HOM05D006884 ORTHO05D008604 3.1e-221 772.3 725 56.8
PSO063G0254 Papaver somniferum HOM05D006884 ORTHO05D008604 2.6e-220 769.2 692 61.0
HanXRQChr07g0197411 Helianthus annuus HOM05D006884 ORTHO05D008604 2.9e-219 765.8 689 58.8
THA.LOC104815748 Tarenaya hassleriana HOM05D006884 ORTHO05D008604 7.8e-217 757.7 690 60.1
ECA238G4524 Erigeron canadensis HOM05D006884 ORTHO05D008604 5.1e-216 755.0 664 59.6
Sc06g0010010 Simmondsia chinensis HOM05D006884 ORTHO05D008604 1.5e-215 753.4 678 59.9
Thhalv10006976m.g Eutrema salsugineum HOM05D006884 ORTHO05D008604 7.3e-215 751.1 698 59.2
Nitab4.5_0002186g0020 Nicotiana tabacum HOM05D006884 ORTHO05D008604 8.1e-214 747.7 637 61.2
CARHR007750 Cardamine hirsuta HOM05D006884 ORTHO05D008604 1.8e-213 746.5 700 58.7
Ca_19247_v3 Cicer arietinum L. HOM05D006884 ORTHO05D008604 1.8e-213 746.5 679 60.7
arahy.Tifrunner.gnm1.ann1.H1W27A Arachis hypogaea HOM05D006884 ORTHO05D008604 3.1e-213 745.7 604 64.7
Carub.0001s0732 Capsella rubella HOM05D006884 ORTHO05D008604 3.1e-213 745.7 679 60.1
Migut.N02612 Erythranthe guttata HOM05D006884 ORTHO05D008604 3.1e-213 745.7 688 57.6
MSTRG.12324 Avicennia marina HOM05D006884 ORTHO05D008604 5.3e-213 745.0 692 57.5
AT1G07970 Arabidopsis thaliana HOM05D006884 ORTHO05D008604 9.0e-213 744.2 680 60.1
A06p05030 Brassica napus HOM05D006884 ORTHO05D008604 1.3e-211 740.3 675 59.4
C05p05970 Brassica napus HOM05D006884 ORTHO05D008604 2.2e-211 739.6 677 59.5
BolC5t29358H Brassica oleracea HOM05D003203 ORTHO05D003526 8.4e-211 737.6 677 59.2
Hund10472 Selenicereus undatus HOM05D006884 ORTHO05D008604 8.4e-211 737.6 682 58.9
Aa31LG8G13130 Aethionema arabicum HOM05D006884 ORTHO05D008604 4.2e-210 735.3 674 59.1
BraA06t23709Z Brassica rapa HOM05D006884 ORTHO05D008604 3.5e-209 732.3 675 59.0
AL1G18300 Arabidopsis lyrata HOM05D006884 ORTHO05D008604 3.0e-208 729.2 697 58.4
Lsat_1_v5_gn_2_97900 Lactuca sativa HOM05D006884 ORTHO05D008604 3.7e-206 722.2 685 55.9
Thecc.09G259000 Theobroma cacao HOM05D006884 ORTHO05D008604 5.3e-205 718.4 482 73.4
BcaB02g06701 Brassica carinata HOM05D006884 ORTHO05D008604 5.5e-202 708.4 665 58.9
PSO339G1719 Papaver somniferum HOM05D006884 ORTHO05D008604 2.7e-201 706.1 599 62.6
ATR0759G051 Amborella trichopoda HOM05D006884 ORTHO05D008604 2.3e-200 703.0 684 57.9
BcaC05g24709 Brassica carinata HOM05D006884 ORTHO05D008604 5.6e-199 698.4 668 57.3
MBI14_g07928_MAGBIO Magnolia biondii HOM05D006884 ORTHO05D008604 6.2e-198 694.9 607 60.6
SGA_v2.0_scaffold2G00907 Striga asiatica HOM05D006884 ORTHO05D008604 6.2e-198 694.9 644 58.7
AUR62025009 Chenopodium quinoa HOM05D006884 ORTHO05D008604 5.3e-197 691.8 684 55.1
CAN.G631.5 Capsicum annuum HOM05D006884 ORTHO05D008604 1.3e-195 687.2 615 58.4
SalBow3G0672 Salvia bowleyana HOM05D006884 ORTHO05D008604 3.8e-195 685.6 689 54.9
CsaV3_1G012990 Cucumis sativus L. HOM05D006884 ORTHO05D008604 5.5e-194 681.8 582 62.9
Sabra09G0009400 Salix brachista HOM05D006884 ORTHO05D008604 3.3e-191 672.5 603 60.2
AUR62006527 Chenopodium quinoa HOM05D006884 ORTHO05D008604 9.7e-191 671.0 679 54.2
Zm00001eb397080 Zea mays HOM05D006884 ORTHO05D008604 2.7e-185 652.9 674 54.2
Os03g0288800 Oryza sativa ssp. japonica HOM05D006884 ORTHO05D008604 1.1e-183 647.5 674 54.6
SEGI_12216 Sequoiadendron giganteum HOM05D006884 ORTHO05D008604 7.4e-183 644.8 719 51.6
HPP92_025089 Vanilla planifolia HOM05D006884 ORTHO05D008604 2.2e-179 633.3 685 53.3
CDE09G0273 Ceratophyllum demersum HOM05D006884 ORTHO05D008604 1.1e-175 620.9 640 54.8
Sp4g05030 Schrenkiella parvula HOM05D006884 ORTHO05D008604 5.2e-168 595.5 605 54.9
Rhsim08G0043200 Rhododendron simsii HOM05D006884 ORTHO05D008604 1.5e-154 550.8 580 53.8
Mapoly0043s0112 Marchantia polymorpha HOM05D006884 ORTHO05D008604 9.5e-138 495.0 704 44.2
unitig_61.g26171 Utricularia gibba HOM05D006884 ORTHO05D008604 4.0e-136 489.6 610 48.0
SMO364G0331 Selaginella moellendorffii HOM05D006884 ORTHO05D008604 4.1e-133 479.6 488 53.1
Pp3c12_22070 Physcomitrium patens HOM05D006884 ORTHO05D008604 1.4e-125 454.5 697 42.9
Actinidia24083 Actinidia chinensis HOM05D006884 ORTHO05D008604 1.4e-120 438.0 299 69.6
arahy.Tifrunner.gnm1.ann1.REDW7M Arachis hypogaea HOM05D006884 ORTHO05D008604 1.5e-114 417.9 278 71.2
BcaB07g34161 Brassica carinata HOM05D006884 ORTHO05D008604 4.6e-108 396.4 353 55.5
Actinidia24084 Actinidia chinensis HOM05D006884 ORTHO05D008604 3.3e-66 257.3 315 52.1
Glyma.12G071233 Glycine max HOM05D006884 ORTHO05D008604 3.7e-65 253.8 216 60.6
Nn1g02428 Nelumbo nucifera HOM05D006884 ORTHO05D008604 1.4e-35 155.6 122 62.3
Nn3g17897 Nelumbo nucifera HOM05D006884 ORTHO05D008604 4.0e-35 154.1 98 69.4
Nn1g02077 Nelumbo nucifera HOM05D006884 ORTHO05D008604 8.8e-35 152.9 98 70.4
SEGI_34075 Sequoiadendron giganteum HOM05D000114 ORTHO05D008604 3.7e-33 147.5 449 30.1
Nn4g22222 Nelumbo nucifera HOM05D006884 ORTHO05D008604 7.0e-32 143.3 94 67.0
Glyma.12G071167 Glycine max HOM05D006884 ORTHO05D008604 1.4e-24 119.0 200 44.0
Nn3g19002 Nelumbo nucifera HOM05D005115 ORTHO05D005703 1.8e-24 118.6 76 71.1
Nn4g22225 Nelumbo nucifera HOM05D006884 ORTHO05D008604 4.1e-24 117.5 100 57.0
Cre12.g555200 Chlamydomonas reinhardtii HOM05D006884 ORTHO05D008604 2.1e-20 105.1 323 28.2
Nitab4.5_0002186g0030 Nicotiana tabacum HOM05D006884 ORTHO05D008604 1.4e-11 75.9 47 66.0
Aa31LG3G16570 Aethionema arabicum HOM05D006884 ORTHO05D008604 1.8e-11 75.5 183 30.6
Nn1g05254 Nelumbo nucifera HOM05D006884 ORTHO05D008604 1.8e-11 75.5 70 57.1
Nn1g03843 Nelumbo nucifera HOM05D006884 ORTHO05D008604 7.8e-07 60.1 65 50.8


User provided reference genes

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