Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Eucgr.J00791 Eucalyptus grandis HOM05D005867 ORTHO05D007273 3.8e-105 384.8 186 100.0
PGR119G1510 Punica granatum HOM05D005867 ORTHO05D007273 1.3e-97 359.8 186 91.4
Ciclev10016610m.g Citrus clementina HOM05D005867 ORTHO05D007273 4.6e-95 351.3 186 87.6
Gohir.A05G068300 Gossypium hirsutum HOM05D005867 ORTHO05D007273 7.8e-95 350.5 186 87.6
COL.COLO4_24845 Corchorus olitorius HOM05D005867 ORTHO05D007273 2.3e-94 349.0 186 86.6
Rhsim13G0224100 Rhododendron simsii HOM05D005867 ORTHO05D007273 2.3e-94 349.0 186 86.6
Gorai.009G072300 Gossypium raimondii HOM05D005867 ORTHO05D007273 3.0e-94 348.6 186 87.6
Cpa.g.sc84.80 Carica papaya HOM05D005867 ORTHO05D007273 5.1e-94 347.8 183 87.4
Sabra01G0013100 Salix brachista HOM05D005867 ORTHO05D007273 6.6e-94 347.4 186 85.5
Atru.chr3.2589 Acer truncatum HOM05D005867 ORTHO05D007273 3.3e-93 345.1 186 86.6
GSVIVG01025306001 Vitis vinifera HOM05D005867 ORTHO05D007273 3.3e-93 345.1 186 85.5
Duzib168G0296 Durio zibethinus HOM05D005867 ORTHO05D007273 4.3e-93 344.7 186 86.6
Gohir.D05G071300 Gossypium hirsutum HOM05D005867 ORTHO05D007273 4.3e-93 344.7 180 88.9
CANSAT54G1708 Cannabis sativa HOM05D005867 ORTHO05D007273 5.6e-93 344.4 186 86.6
VMungo1080G0295 Vigna mungo HOM05D005867 ORTHO05D007273 7.3e-93 344.0 186 87.6
Thecc.09G227900 Theobroma cacao HOM05D005867 ORTHO05D007273 9.6e-93 343.6 186 83.9
Potri.001G018500 Populus trichocarpa HOM05D005867 ORTHO05D007273 1.6e-92 342.8 186 84.9
EL10Ac4g10299 Beta vulgaris HOM05D005867 ORTHO05D007273 2.1e-92 342.4 186 86.0
Ah.04g161870 Amaranthus hybridus HOM05D005867 ORTHO05D007273 2.8e-92 342.0 186 84.9
Phvul.L010243 Phaseolus vulgaris HOM05D005867 ORTHO05D007273 2.8e-92 342.0 186 87.6
MELO3C015200.2 Cucumis melo HOM05D005867 ORTHO05D007273 4.8e-92 341.3 186 86.6
Ah.06g193630 Amaranthus hybridus HOM05D005867 ORTHO05D007273 1.1e-91 340.1 186 84.4
Cfa009733 Carpinus fangiana HOM05D005867 ORTHO05D007273 1.4e-91 339.7 186 84.9
DCAR_002056 Daucus carota HOM05D005867 ORTHO05D007273 1.4e-91 339.7 183 85.8
CiPaw.13G163600 Carya illinoinensis HOM05D005867 ORTHO05D007273 2.4e-91 339.0 186 85.5
THA.LOC104804975 Tarenaya hassleriana HOM05D005867 ORTHO05D007273 2.4e-91 339.0 184 84.8
CsaV3_1G042730 Cucumis sativus L. HOM05D005867 ORTHO05D007273 3.1e-91 338.6 186 85.5
Dinv36283 Davidia involucrata HOM05D005867 ORTHO05D007273 4.0e-91 338.2 186 83.9
TAR636G0304 Trochodendron aralioides HOM05D005867 ORTHO05D007273 4.0e-91 338.2 186 83.9
ClCG03G013300 Citrullus lanatus HOM05D005867 ORTHO05D007273 5.3e-91 337.8 184 85.9
SHI29727 Sapria himalayana HOM05D005867 ORTHO05D007273 5.3e-91 337.8 186 82.3
ECA238G1591 Erigeron canadensis HOM05D005867 ORTHO05D007273 6.9e-91 337.4 180 85.0
Manes.06G166900 Manihot esculenta HOM05D005867 ORTHO05D007273 6.9e-91 337.4 186 83.3
Nitab4.5_0008647g0010 Nicotiana tabacum HOM05D005867 ORTHO05D007273 6.9e-91 337.4 185 85.4
Sed0004394 Sechium edule HOM05D005867 ORTHO05D007273 6.9e-91 337.4 186 84.4
AUR62000096 Chenopodium quinoa HOM05D005867 ORTHO05D007273 1.2e-90 336.7 186 82.8
AUR62019269 Chenopodium quinoa HOM05D005867 ORTHO05D007273 1.2e-90 336.7 186 82.8
Glyma.15G033100 Glycine max HOM05D005867 ORTHO05D007273 1.2e-90 336.7 186 85.5
TWI60G1455 Tripterygium wilfordii HOM05D005867 ORTHO05D007273 1.2e-90 336.7 183 85.8
TAR633G2552 Trochodendron aralioides HOM05D005867 ORTHO05D007273 1.2e-90 336.7 184 84.2
Nitab4.5_0001925g0100 Nicotiana tabacum HOM05D005867 ORTHO05D007273 1.5e-90 336.3 185 85.4
Oeu035742.1 Olea europaea HOM05D005867 ORTHO05D007273 1.5e-90 336.3 184 84.8
Peaxi162Scf00029g00326 Petunia axillaris HOM05D005867 ORTHO05D007273 1.5e-90 336.3 184 82.6
QL01p005337 Quercus lobata HOM05D005867 ORTHO05D007273 1.5e-90 336.3 184 83.7
MSTRG.21396 Avicennia marina HOM05D005867 ORTHO05D007273 2.0e-90 335.9 184 83.7
Prupe.6G023200 Prunus persica HOM05D005867 ORTHO05D007273 2.0e-90 335.9 183 83.6
RcHm_v2.0_Chr5g0077191 Rosa chinensis HOM05D005867 ORTHO05D007273 2.6e-90 335.5 184 82.6
Sc06g0004490 Simmondsia chinensis HOM05D005867 ORTHO05D007273 2.6e-90 335.5 186 84.9
MD03G1024000 Malus domestica HOM05D005867 ORTHO05D007273 4.5e-90 334.7 186 82.8
Actinidia16309 Actinidia chinensis HOM05D005867 ORTHO05D007273 5.8e-90 334.3 186 82.8
MSTRG.17581 Avicennia marina HOM05D005867 ORTHO05D007273 5.8e-90 334.3 184 83.2
CAN.G575.64 Capsicum annuum HOM05D005867 ORTHO05D007273 5.8e-90 334.3 184 83.2
HanXRQChr02g0036871 Helianthus annuus HOM05D005867 ORTHO05D007273 7.6e-90 334.0 186 82.8
Carub.0006s1124 Capsella rubella HOM05D005867 ORTHO05D007273 1.3e-89 333.2 183 84.2
Thhalv10014788m.g Eutrema salsugineum HOM05D005867 ORTHO05D007273 1.3e-89 333.2 183 84.2
PGSC0003DMG400023838 Solanum tuberosum HOM05D005867 ORTHO05D007273 1.3e-89 333.2 184 83.7
Sp6g30910 Schrenkiella parvula HOM05D005867 ORTHO05D007273 1.7e-89 332.8 183 83.6
Sopen12g034670 Solanum pennellii HOM05D005867 ORTHO05D007273 1.7e-89 332.8 184 83.7
MD11G1028900 Malus domestica HOM05D005867 ORTHO05D007273 2.2e-89 332.4 186 81.7
Solyc12g100050.2 Solanum lycopersicum HOM05D005867 ORTHO05D007273 2.2e-89 332.4 184 83.7
CSS0048722 Camellia sinensis var. sinensis HOM05D005867 ORTHO05D007273 2.9e-89 332.0 182 84.1
Nn2g15416 Nelumbo nucifera HOM05D005867 ORTHO05D007273 2.9e-89 332.0 186 83.9
Aa31LG3G14590 Aethionema arabicum HOM05D005867 ORTHO05D007273 3.8e-89 331.6 183 82.5
AL6G23670 Arabidopsis lyrata HOM05D005867 ORTHO05D007273 3.8e-89 331.6 183 83.6
AT5G13070 Arabidopsis thaliana HOM05D005867 ORTHO05D007273 3.8e-89 331.6 183 83.6
BcaC04g19155 Brassica carinata HOM05D002203 ORTHO05D007273 3.8e-89 331.6 180 85.0
Solyc11g061760.3 Solanum lycopersicum HOM05D005867 ORTHO05D007273 3.8e-89 331.6 184 82.1
Sopen11g023660 Solanum pennellii HOM05D005867 ORTHO05D007273 3.8e-89 331.6 184 82.1
CARHR200400 Cardamine hirsuta HOM05D005867 ORTHO05D007273 4.9e-89 331.3 183 83.1
PGSC0003DMG400013588 Solanum tuberosum HOM05D005867 ORTHO05D007273 6.4e-89 330.9 184 82.1
Haze_23087 Corylus avellana HOM05D005867 ORTHO05D007273 8.4e-89 330.5 183 85.2
Cc01_g01980 Coffea canephora HOM05D005867 ORTHO05D007273 1.9e-88 329.3 186 81.2
Lsat_1_v5_gn_2_100781 Lactuca sativa HOM05D005867 ORTHO05D007273 4.2e-88 328.2 186 81.2
A02p01670 Brassica napus HOM05D005867 ORTHO05D007273 7.1e-88 327.4 180 82.8
BolC2t06533H Brassica oleracea HOM05D005867 ORTHO05D007273 7.1e-88 327.4 180 82.8
BraA02t05146Z Brassica rapa HOM05D005867 ORTHO05D007273 7.1e-88 327.4 180 82.8
Dinv08036 Davidia involucrata HOM05D005867 ORTHO05D007273 9.3e-88 327.0 175 85.7
Migut.D00576 Erythranthe guttata HOM05D005867 ORTHO05D007273 9.3e-88 327.0 182 81.9
Nitab4.5_0002766g0030 Nicotiana tabacum HOM05D005867 ORTHO05D007273 9.3e-88 327.0 184 80.4
BcaNung01858 Brassica carinata HOM05D005867 ORTHO05D007273 1.6e-87 326.2 180 82.2
BraA10t44575Z Brassica rapa HOM05D005867 ORTHO05D007273 1.6e-87 326.2 180 83.3
HanXRQChr14g0453051 Helianthus annuus HOM05D005867 ORTHO05D007273 1.6e-87 326.2 186 81.2
BcaNung01174 Brassica carinata HOM05D005867 ORTHO05D007273 2.7e-87 325.5 180 82.2
FvH4_3g43090 Fragaria vesca HOM05D005867 ORTHO05D007273 2.7e-87 325.5 184 80.4
FAN11G1123 Fragaria x ananassa HOM05D005867 ORTHO05D007273 2.7e-87 325.5 184 80.4
FAN25G0812 Fragaria x ananassa HOM05D005867 ORTHO05D007273 2.7e-87 325.5 184 80.4
SGA_v2.0_scaffold8G04610 Striga asiatica HOM05D005867 ORTHO05D007273 2.7e-87 325.5 184 80.4
Aqoxy1G00241 Aquilegia oxysepala HOM05D005867 ORTHO05D007273 3.5e-87 325.1 178 83.1
C02p05880 Brassica napus HOM05D005867 ORTHO05D007273 3.5e-87 325.1 180 81.7
SalBow4G1382 Salvia bowleyana HOM05D005867 ORTHO05D007273 3.5e-87 325.1 184 78.8
A10p25130 Brassica napus HOM05D005867 ORTHO05D007273 4.6e-87 324.7 180 82.8
TWI34G0922 Tripterygium wilfordii HOM05D005867 ORTHO05D007273 6.0e-87 324.3 172 87.8
Nitab4.5_0008868g0020 Nicotiana tabacum HOM05D005867 ORTHO05D007273 7.9e-87 323.9 184 80.4
Oeu052048.1 Olea europaea HOM05D005867 ORTHO05D007273 1.0e-86 323.6 183 82.0
SalBow4G0034 Salvia bowleyana HOM05D005867 ORTHO05D007273 1.0e-86 323.6 184 78.3
C09p64030 Brassica napus HOM05D005867 ORTHO05D007273 1.8e-86 322.8 180 81.7
BolC9t59241H Brassica oleracea HOM05D005867 ORTHO05D007273 1.8e-86 322.8 180 81.7
Migut.N02304 Erythranthe guttata HOM05D005867 ORTHO05D007273 5.1e-86 321.2 186 80.1
FAN21G2433 Fragaria x ananassa HOM05D005867 ORTHO05D007273 5.1e-86 321.2 184 79.3
FAN16G1279 Fragaria x ananassa HOM05D005867 ORTHO05D007273 4.3e-85 318.2 184 79.3
Duzib150G0087 Durio zibethinus HOM05D005867 ORTHO05D007273 6.2e-84 314.3 181 82.9
Lalb_Chr14g0372181 Lupinus albus HOM05D005867 ORTHO05D007273 8.1e-84 313.9 186 79.0
arahy.Tifrunner.gnm1.ann1.V9D8IR Arachis hypogaea HOM05D005867 ORTHO05D007273 5.3e-83 311.2 186 78.5
arahy.Tifrunner.gnm1.ann1.2D2P15 Arachis hypogaea HOM05D005867 ORTHO05D007273 1.2e-82 310.1 186 78.0
unitig_21.g20645 Utricularia gibba HOM05D005867 ORTHO05D007273 2.6e-82 308.9 184 73.9
PSO384G4422 Papaver somniferum HOM05D005867 ORTHO05D007273 1.7e-81 306.2 187 77.5
PSO339G4569 Papaver somniferum HOM05D005867 ORTHO05D007273 1.4e-80 303.1 187 77.0
Lj3g0003495 Lotus japonicus HOM05D005867 ORTHO05D007273 3.5e-79 298.5 186 76.3
TPR.G6870 Trifolium pratense HOM05D005867 ORTHO05D007273 3.5e-79 298.5 186 75.8
Cfa009734 Carpinus fangiana HOM05D005867 ORTHO05D007273 1.3e-78 296.6 183 73.2
Psat5g287440 Pisum sativum HOM05D005867 ORTHO05D007273 5.1e-78 294.7 180 77.8
MBI17_g30524_MAGBIO Magnolia biondii HOM05D005867 ORTHO05D007273 1.9e-77 292.7 173 76.9
Medtr1g058050 Medicago truncatula HOM05D005867 ORTHO05D007273 2.5e-77 292.4 186 74.2
Ca_01285_v3 Cicer arietinum L. HOM05D005867 ORTHO05D007273 5.6e-77 291.2 186 73.7
Medtr2g017985 Medicago truncatula HOM05D005867 ORTHO05D007273 1.6e-76 289.7 186 72.6
Medtr8g096810 Medicago truncatula HOM05D005867 ORTHO05D007273 1.6e-76 289.7 186 73.1
QL01p005297 Quercus lobata HOM05D005867 ORTHO05D007273 2.1e-76 289.3 185 71.4
Medtr2g098170 Medicago truncatula HOM05D005867 ORTHO05D007273 2.8e-76 288.9 186 73.1
CiPaw.13G163500 Carya illinoinensis HOM05D005867 ORTHO05D007273 4.9e-73 278.1 180 70.0
ATR0605G298 Amborella trichopoda HOM05D005867 ORTHO05D007273 1.5e-69 266.5 183 65.6
Mapoly0061s0125 Marchantia polymorpha HOM05D005867 ORTHO05D007273 5.5e-64 248.1 180 56.7
Os02g0717900 Oryza sativa ssp. japonica HOM05D005867 ORTHO05D007273 2.5e-56 222.6 187 54.5
SMO147G0033 Selaginella moellendorffii HOM05D005867 ORTHO05D007273 5.5e-56 221.5 180 52.8
MBI01_g27622_MAGBIO Magnolia biondii HOM05D005867 ORTHO05D007273 1.6e-55 219.9 172 62.8
Pp3c14_26010 Physcomitrium patens HOM05D005867 ORTHO05D007273 2.1e-55 219.5 177 51.4
CBR_g20418 Chara braunii HOM05D005867 ORTHO05D007273 2.8e-52 209.1 185 51.4
Pp3c1_37310 Physcomitrium patens HOM05D005867 ORTHO05D007273 3.7e-52 208.8 186 48.9
HPP92_022794 Vanilla planifolia HOM05D005867 ORTHO05D007273 1.0e-46 190.7 151 58.3
Os09g0486000 Oryza sativa ssp. japonica HOM05D005867 ORTHO05D007273 3.1e-43 179.1 180 51.1
Lj2P647T17 Lonicera japonica HOM05D005867 ORTHO05D007273 3.7e-36 155.6 89 80.9
Zm00001eb316590 Zea mays HOM05D005867 ORTHO05D007273 5.9e-34 148.3 172 47.7
Zm00001eb189280 Zea mays HOM05D005867 ORTHO05D007273 2.4e-27 126.3 88 67.0
Mapoly0008s0230 Marchantia polymorpha HOM05D005867 ORTHO05D254737 1.6e-23 113.6 154 35.1
Actinidia28459 Actinidia chinensis HOM05D005867 ORTHO05D055216 2.8e-20 102.8 54 85.2
Cfa022043 Carpinus fangiana HOM05D002321 ORTHO05D006940 2.1e-07 60.1 88 35.2


User provided reference genes

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