Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Eucgr.J00662 Eucalyptus grandis HOM05D006216 ORTHO05D007760 3.0e-227 791.6 394 100.0
QL01p020730 Quercus lobata HOM05D006216 ORTHO05D007760 4.5e-167 591.7 343 83.1
VMungo1215G0750 Vigna mungo HOM05D006216 ORTHO05D007760 5.9e-167 591.3 381 77.4
PGR119G0354 Punica granatum HOM05D006216 ORTHO05D007760 1.1e-165 587.0 351 82.6
Glyma.20G046800 Glycine max HOM05D006216 ORTHO05D007760 1.6e-164 583.2 384 76.0
Lj6g0023824 Lotus japonicus HOM05D006216 ORTHO05D007760 1.6e-164 583.2 380 76.3
Glyma.13G072700 Glycine max HOM05D006216 ORTHO05D007760 3.6e-164 582.0 384 75.8
Thecc.09G251000 Theobroma cacao HOM05D006216 ORTHO05D007760 4.6e-164 581.6 335 83.0
MELO3C015605.2 Cucumis melo HOM05D006216 ORTHO05D007760 1.4e-163 580.1 328 83.5
CANSAT54G1188 Cannabis sativa HOM05D006216 ORTHO05D007760 1.8e-163 579.7 361 78.4
Ca_13675_v3 Cicer arietinum L. HOM05D006216 ORTHO05D007760 1.8e-163 579.7 326 83.7
Lalb_Chr18g0048331 Lupinus albus HOM05D006216 ORTHO05D007760 3.9e-163 578.6 342 82.2
Phvul.006G019500 Phaseolus vulgaris HOM05D006216 ORTHO05D007760 3.9e-163 578.6 381 75.6
RcHm_v2.0_Chr5g0050131 Rosa chinensis HOM05D006216 ORTHO05D007760 3.9e-163 578.6 343 81.6
TAR633G2593 Trochodendron aralioides HOM05D006216 ORTHO05D007760 3.9e-163 578.6 356 80.3
Medtr3g437340 Medicago truncatula HOM05D006216 ORTHO05D007760 6.7e-163 577.8 331 82.2
TPR.G11861 Trifolium pratense HOM05D006216 ORTHO05D007760 1.5e-162 576.6 343 80.5
Haze_23545 Corylus avellana HOM05D006216 ORTHO05D007760 2.0e-162 576.2 387 73.4
TWI31G0496 Tripterygium wilfordii HOM05D006216 ORTHO05D007760 2.0e-162 576.2 334 82.3
Cfa010159 Carpinus fangiana HOM05D006216 ORTHO05D007760 1.3e-161 573.5 395 72.7
CsaV3_1G041900 Cucumis sativus L. HOM05D006216 ORTHO05D007760 1.3e-161 573.5 339 81.4
Sed0006982 Sechium edule HOM05D006216 ORTHO05D007760 1.7e-161 573.2 355 77.5
arahy.Tifrunner.gnm1.ann1.G3L2E7 Arachis hypogaea HOM05D006216 ORTHO05D007760 2.8e-161 572.4 386 73.6
CiPaw.13G146100 Carya illinoinensis HOM05D006216 ORTHO05D007760 6.3e-161 571.2 336 81.0
TWI75G0612 Tripterygium wilfordii HOM05D006216 ORTHO05D007760 6.3e-161 571.2 334 81.7
arahy.Tifrunner.gnm1.ann1.CPM77E Arachis hypogaea HOM05D006216 ORTHO05D007760 2.4e-160 569.3 332 81.0
Gohir.A07G119000 Gossypium hirsutum HOM05D006216 ORTHO05D007760 3.1e-160 568.9 336 81.0
MD03G1163100 Malus domestica HOM05D006216 ORTHO05D007760 4.1e-160 568.5 388 74.5
CSS0031944 Camellia sinensis var. sinensis HOM05D006216 ORTHO05D007760 6.9e-160 567.8 384 72.7
Gohir.D07G123300 Gossypium hirsutum HOM05D006216 ORTHO05D007760 6.9e-160 567.8 334 81.4
Actinidia07007 Actinidia chinensis HOM05D006216 ORTHO05D007760 1.2e-159 567.0 362 76.5
Ciclev10015579m.g Citrus clementina HOM05D006216 ORTHO05D007760 1.2e-159 567.0 339 80.8
AUR62024257 Chenopodium quinoa HOM05D006216 ORTHO05D007760 2.6e-159 565.8 330 82.7
FAN21G1147 Fragaria x ananassa HOM05D006216 ORTHO05D007760 4.5e-159 565.1 329 81.8
THA.LOC104816956 Tarenaya hassleriana HOM05D006216 ORTHO05D007760 4.5e-159 565.1 341 76.8
Lalb_Chr15g0080191 Lupinus albus HOM05D006216 ORTHO05D007760 5.9e-159 564.7 347 80.4
Thhalv10002004m.g Eutrema salsugineum HOM05D006216 ORTHO05D007760 7.7e-159 564.3 331 78.9
FvH4_3g27650 Fragaria vesca HOM05D006216 ORTHO05D007760 1.0e-158 563.9 329 81.5
FAN11G0826 Fragaria x ananassa HOM05D006216 ORTHO05D007760 1.0e-158 563.9 329 81.5
FAN25G0225 Fragaria x ananassa HOM05D006216 ORTHO05D007760 1.3e-158 563.5 329 81.8
Manes.01G176400 Manihot esculenta HOM05D006216 ORTHO05D007760 1.7e-158 563.1 339 79.6
PSO339G5720 Papaver somniferum HOM05D006216 ORTHO05D007760 1.7e-158 563.1 357 77.6
PSO384G3582 Papaver somniferum HOM05D006216 ORTHO05D007760 1.7e-158 563.1 357 77.6
vmacro04357 Vaccinium macrocarpon HOM05D006216 ORTHO05D007760 1.7e-158 563.1 360 77.5
Potri.001G225100 Populus trichocarpa HOM05D006216 ORTHO05D007760 2.2e-158 562.8 330 80.3
Gorai.001G133000 Gossypium raimondii HOM05D006216 ORTHO05D007760 2.9e-158 562.4 337 80.7
Sp4g08430 Schrenkiella parvula HOM05D006216 ORTHO05D007760 3.8e-158 562.0 331 78.5
Sc04g0009550 Simmondsia chinensis HOM05D006216 ORTHO05D007760 3.8e-158 562.0 349 77.7
A07p17910 Brassica napus HOM05D006216 ORTHO05D007760 8.5e-158 560.8 354 74.6
BraA07t29509Z Brassica rapa HOM05D006216 ORTHO05D007760 8.5e-158 560.8 354 74.6
Lj2A825T28 Lonicera japonica HOM05D006216 ORTHO05D007760 2.5e-157 559.3 382 72.8
Solyc01g009010.3 Solanum lycopersicum HOM05D006216 ORTHO05D007760 2.5e-157 559.3 358 76.3
Sopen01g004500 Solanum pennellii HOM05D006216 ORTHO05D007760 2.5e-157 559.3 358 76.0
Duzib168G1114 Durio zibethinus HOM05D006216 ORTHO05D007760 3.2e-157 558.9 357 77.3
Manes.02G134400 Manihot esculenta HOM05D006216 ORTHO05D007760 3.2e-157 558.9 382 73.6
Potri.009G021800 Populus trichocarpa HOM05D006216 ORTHO05D007760 3.2e-157 558.9 326 81.3
Hma1.2p1_1843F.1_g305010 Hydrangea macrophylla HOM05D006216 ORTHO05D007760 4.2e-157 558.5 389 72.2
CSS0004136 Camellia sinensis var. sinensis HOM05D006216 ORTHO05D007760 5.5e-157 558.1 349 77.9
PGSC0003DMG400022703 Solanum tuberosum HOM05D006216 ORTHO05D007760 5.5e-157 558.1 363 75.2
BcaC02g10847 Brassica carinata HOM05D006216 ORTHO05D007760 7.2e-157 557.8 354 74.0
C04p24560 Brassica napus HOM05D006216 ORTHO05D007760 7.2e-157 557.8 354 74.0
BolC4t23960H Brassica oleracea HOM05D006216 ORTHO05D007760 7.2e-157 557.8 354 73.7
Dinv29341 Davidia involucrata HOM05D006216 ORTHO05D007760 7.2e-157 557.8 385 71.4
ECA238G2733 Erigeron canadensis HOM05D006216 ORTHO05D007760 7.2e-157 557.8 330 79.7
Psat5g182280 Pisum sativum HOM05D006216 ORTHO05D007760 7.2e-157 557.8 344 77.0
Carub.0004s0743 Capsella rubella HOM05D006216 ORTHO05D007760 1.2e-156 557.0 331 77.9
CARHR119100 Cardamine hirsuta HOM05D006216 ORTHO05D007760 1.2e-156 557.0 331 78.2
GSVIVG01037382001 Vitis vinifera HOM05D006216 ORTHO05D007760 1.2e-156 557.0 375 75.5
MSTRG.12426 Avicennia marina HOM05D006216 ORTHO05D007760 2.1e-156 556.2 345 77.1
AT2G26930 Arabidopsis thaliana HOM05D006216 ORTHO05D007760 2.7e-156 555.8 353 74.2
BcaB02g10053 Brassica carinata HOM05D006216 ORTHO05D007760 3.6e-156 555.4 368 72.0
SalBow6G4438 Salvia bowleyana HOM05D006216 ORTHO05D007760 4.7e-156 555.1 338 78.7
CAN.G714.2 Capsicum annuum HOM05D006216 ORTHO05D007760 6.1e-156 554.7 343 77.6
AUR62005484 Chenopodium quinoa HOM05D006216 ORTHO05D007760 1.0e-155 553.9 326 82.2
AL4G20170 Arabidopsis lyrata HOM05D006216 ORTHO05D007760 8.8e-155 550.8 353 73.9
HanXRQChr14g0433421 Helianthus annuus HOM05D006216 ORTHO05D007760 8.8e-155 550.8 337 77.7
Nitab4.5_0002300g0020 Nicotiana tabacum HOM05D006216 ORTHO05D007760 1.1e-154 550.4 373 73.2
Lsat_1_v5_gn_2_36221 Lactuca sativa HOM05D006216 ORTHO05D007760 1.5e-154 550.1 349 74.8
Hund25392 Selenicereus undatus HOM05D006216 ORTHO05D007760 1.5e-154 550.1 343 77.0
Peaxi162Scf00050g02022 Petunia axillaris HOM05D006216 ORTHO05D007760 2.6e-154 549.3 382 72.3
Migut.D00703 Erythranthe guttata HOM05D006216 ORTHO05D007760 5.7e-154 548.1 339 77.3
Cc01_g07140 Coffea canephora HOM05D006216 ORTHO05D007760 4.8e-153 545.0 362 74.0
Nn7g37015 Nelumbo nucifera HOM05D006216 ORTHO05D007760 3.1e-152 542.3 321 82.2
Rhsim13G0202500 Rhododendron simsii HOM05D006216 ORTHO05D007760 4.1e-152 542.0 378 73.3
ClCG03G014320 Citrullus lanatus HOM05D006216 ORTHO05D007760 9.1e-152 540.8 330 78.5
ATR0782G058 Amborella trichopoda HOM05D006216 ORTHO05D007760 7.7e-151 537.7 327 76.8
Aa31LG5G8850 Aethionema arabicum HOM05D006216 ORTHO05D007760 1.3e-150 537.0 398 65.8
Aqoxy1G00047 Aquilegia oxysepala HOM05D006216 ORTHO05D007760 1.3e-150 537.0 342 76.9
Zm00001eb150630 Zea mays HOM05D006216 ORTHO05D007760 2.2e-150 536.2 362 71.5
Sabra16G0133700 Salix brachista HOM05D006216 ORTHO05D007760 5.0e-150 535.0 382 68.8
Os01g0802100 Oryza sativa ssp. japonica HOM05D006216 ORTHO05D007760 7.2e-149 531.2 359 71.9
SGA_v2.0_scaffold79G25547 Striga asiatica HOM05D006216 ORTHO05D007760 8.8e-147 524.2 370 71.6
MSTRG.21323 Avicennia marina HOM05D006216 ORTHO05D007760 2.0e-146 523.1 335 74.0
Atru.BG.104.p Acer truncatum HOM05D006216 ORTHO05D007760 6.3e-145 518.1 299 83.6
EL10Ac6g13846 Beta vulgaris HOM05D006216 ORTHO05D007760 4.5e-143 511.9 335 74.0
CDE08G0663 Ceratophyllum demersum HOM05D006216 ORTHO05D007760 5.0e-142 508.4 321 76.0
Migut.N02401 Erythranthe guttata HOM05D006216 ORTHO05D007760 7.2e-141 504.6 305 80.7
CDE09G0516 Ceratophyllum demersum HOM05D006216 ORTHO05D007760 3.6e-140 502.3 351 70.7
DCAR_006327 Daucus carota HOM05D006216 ORTHO05D007760 2.3e-139 499.6 338 75.4
Atru.chr3.2830 Acer truncatum HOM05D006216 ORTHO05D007760 1.2e-135 487.3 277 83.8
HPP92_001661 Vanilla planifolia HOM05D006216 ORTHO05D007760 1.6e-135 486.9 358 67.0
Nitab4.5_0000428g0050 Nicotiana tabacum HOM05D006216 ORTHO05D007760 4.5e-135 485.3 333 72.7
unitig_27.g25131 Utricularia gibba HOM05D006216 ORTHO05D007760 2.5e-133 479.6 306 76.8
Pp3c26_490 Physcomitrium patens HOM05D006216 ORTHO05D007760 1.4e-131 473.8 333 68.2
Mapoly0033s0031 Marchantia polymorpha HOM05D006216 ORTHO05D007760 1.3e-129 467.2 361 64.8
SMO367G1046 Selaginella moellendorffii HOM05D006216 ORTHO05D007760 1.1e-125 454.1 323 66.9
CBR_g22270 Chara braunii HOM05D006216 ORTHO05D007760 4.3e-125 452.2 352 63.9
Hma1.2p1_1843F.1_g305000 Hydrangea macrophylla HOM05D006216 ORTHO05D007760 4.3e-117 425.6 302 70.9
AagrBONN_evm.TU.Sc2ySwM_228.3849 Anthoceros agrestis HOM05D006216 ORTHO05D007760 5.8e-114 415.2 295 69.8
MBI19_g37419_MAGBIO Magnolia biondii HOM05D006216 ORTHO05D007760 8.3e-113 411.4 324 64.2
Prupe.4G269400 Prunus persica HOM05D006216 ORTHO05D007760 1.1e-104 384.4 216 84.3
MCO08G209 Micromonas commoda HOM05D006216 ORTHO05D007760 1.4e-88 330.9 296 56.1
Cre02.g145050 Chlamydomonas reinhardtii HOM05D006216 ORTHO05D007760 7.8e-87 325.1 339 49.9
PRCOL_00004294 Prasinoderma coloniale HOM05D006216 ORTHO05D007760 2.0e-82 310.5 303 50.5
Sabra09G0013700 Salix brachista HOM05D006216 ORTHO05D007760 9.3e-80 301.6 291 55.7
SEGI_15556 Sequoiadendron giganteum HOM05D006216 ORTHO05D007760 3.3e-77 293.1 215 68.4
Glyma.17G179800 Glycine max HOM05D006216 ORTHO05D007760 1.0e-70 271.6 181 75.1
Hund17544 Selenicereus undatus HOM05D006216 ORTHO05D007760 7.4e-53 212.2 174 62.1
SEGI_04634 Sequoiadendron giganteum HOM05D006216 ORTHO05D007760 1.3e-49 201.4 130 70.8
FAN26G0546 Fragaria x ananassa HOM05D006216 ORTHO05D010609 6.9e-43 179.1 113 77.0
SMO332G0003 Selaginella moellendorffii HOM05D006216 ORTHO05D007760 4.2e-32 143.3 102 66.7
SMO332G0042 Selaginella moellendorffii HOM05D006216 ORTHO05D007760 3.8e-25 120.2 125 50.4
Oeu063625.1 Olea europaea HOM05D006216 ORTHO05D007760 5.7e-21 106.3 86 60.5
Hund00952 Selenicereus undatus HOM05D006216 ORTHO05D007760 2.8e-20 104.0 74 67.6
SMO198G0007 Selaginella moellendorffii HOM05D006216 ORTHO05D007760 3.1e-19 100.5 106 50.0
Ca_29165_v3 Cicer arietinum L. HOM05D006216 ORTHO05D007760 7.0e-19 99.4 161 36.6
DCAR_006325 Daucus carota HOM05D006216 ORTHO05D007760 7.2e-16 89.4 50 82.0


User provided reference genes

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