Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Eucgr.J00538 Eucalyptus grandis HOM05D006311 ORTHO05D007732 1.4e-99 366.3 192 100.0
ClCG02G022370 Citrullus lanatus HOM05D006311 ORTHO05D007732 6.9e-62 241.1 161 80.1
QL01p011364 Quercus lobata HOM05D006311 ORTHO05D007732 6.9e-62 241.1 169 76.9
CsaV3_6G038500 Cucumis sativus L. HOM05D006311 ORTHO05D007732 4.5e-61 238.4 172 77.3
Glyma.12G093300 Glycine max HOM05D006311 ORTHO05D007732 7.6e-61 237.7 152 84.2
Thecc.09G276000 Theobroma cacao HOM05D006311 ORTHO05D007732 1.3e-60 236.9 169 76.9
COL.COLO4_22654 Corchorus olitorius HOM05D006311 ORTHO05D007732 1.7e-60 236.5 173 74.6
MELO3C014513.2 Cucumis melo HOM05D006311 ORTHO05D007732 1.7e-60 236.5 191 72.3
PGR119G0707 Punica granatum HOM05D006311 ORTHO05D007732 2.2e-60 236.1 188 71.3
GSVIVG01036060001 Vitis vinifera HOM05D006311 ORTHO05D007732 8.5e-60 234.2 169 75.7
Cpa.g.sc195.39 Carica papaya HOM05D006311 ORTHO05D007732 1.1e-59 233.8 191 69.6
Sed0028181 Sechium edule HOM05D006311 ORTHO05D007732 1.4e-59 233.4 164 78.0
FAN25G1023 Fragaria x ananassa HOM05D006311 ORTHO05D007732 2.5e-59 232.6 203 66.0
Gohir.A09G097700 Gossypium hirsutum HOM05D006311 ORTHO05D007732 2.5e-59 232.6 162 77.8
Gorai.006G114200 Gossypium raimondii HOM05D006311 ORTHO05D007732 2.5e-59 232.6 162 77.8
Glyma.11G180200 Glycine max HOM05D006311 ORTHO05D007732 3.2e-59 232.3 153 83.0
Cfa009969 Carpinus fangiana HOM05D006311 ORTHO05D007732 4.2e-59 231.9 169 75.7
Lj3g0006801 Lotus japonicus HOM05D006311 ORTHO05D007732 4.2e-59 231.9 161 77.6
Gohir.D09G097500 Gossypium hirsutum HOM05D006311 ORTHO05D007732 5.5e-59 231.5 162 77.8
QL01p011627 Quercus lobata HOM05D006311 ORTHO05D007732 5.5e-59 231.5 173 74.0
arahy.Tifrunner.gnm1.ann1.INBK63 Arachis hypogaea HOM05D006311 ORTHO05D007732 7.2e-59 231.1 192 69.8
VMungo1127G2206 Vigna mungo HOM05D006311 ORTHO05D007732 7.2e-59 231.1 153 81.0
TWI31G0202 Tripterygium wilfordii HOM05D006311 ORTHO05D007732 9.4e-59 230.7 161 78.3
FvH4_3g25980 Fragaria vesca HOM05D006311 ORTHO05D007732 1.2e-58 230.3 194 68.6
FAN11G0814 Fragaria x ananassa HOM05D006311 ORTHO05D007732 1.2e-58 230.3 194 68.6
Medtr4g052010 Medicago truncatula HOM05D006311 ORTHO05D007732 1.2e-58 230.3 193 68.9
arahy.Tifrunner.gnm1.ann1.HB0RZJ Arachis hypogaea HOM05D006311 ORTHO05D007732 1.6e-58 229.9 192 69.3
Dinv05953 Davidia involucrata HOM05D006311 ORTHO05D007732 2.7e-58 229.2 171 74.3
MD11G1172600 Malus domestica HOM05D006311 ORTHO05D007732 2.7e-58 229.2 158 78.5
SalBow6G1677 Salvia bowleyana HOM05D006311 ORTHO05D007732 3.6e-58 228.8 189 69.3
Manes.11G165200 Manihot esculenta HOM05D006311 ORTHO05D007732 4.6e-58 228.4 194 68.0
Psat7g187040 Pisum sativum HOM05D006311 ORTHO05D007732 4.6e-58 228.4 185 68.6
TPR.G4615 Trifolium pratense HOM05D006311 ORTHO05D007732 4.6e-58 228.4 174 71.8
Ciclev10029330m.g Citrus clementina HOM05D006311 ORTHO05D007732 6.1e-58 228.0 169 75.1
Sc21g0006890 Simmondsia chinensis HOM05D006311 ORTHO05D007732 6.1e-58 228.0 161 76.4
CiPaw.13G131700 Carya illinoinensis HOM05D006311 ORTHO05D007732 7.9e-58 227.6 161 78.9
Duzib150G1639 Durio zibethinus HOM05D006311 ORTHO05D007732 1.0e-57 227.3 148 84.5
CSS0008256 Camellia sinensis var. sinensis HOM05D006311 ORTHO05D007732 1.8e-57 226.5 162 75.3
CSS0012591 Camellia sinensis var. sinensis HOM05D006311 ORTHO05D007732 1.8e-57 226.5 162 75.3
RcHm_v2.0_Chr5g0047271 Rosa chinensis HOM05D006311 ORTHO05D007732 1.8e-57 226.5 197 67.0
HanXRQChr14g0433141 Helianthus annuus HOM05D006311 ORTHO05D007732 2.3e-57 226.1 161 75.2
AUR62001536 Chenopodium quinoa HOM05D006311 ORTHO05D007732 3.0e-57 225.7 166 72.3
Peaxi162Scf00224g00818 Petunia axillaris HOM05D006311 ORTHO05D007732 3.0e-57 225.7 185 67.6
Sabra09G0126500 Salix brachista HOM05D006311 ORTHO05D007732 3.0e-57 225.7 166 75.3
Cc01_g08620 Coffea canephora HOM05D006311 ORTHO05D007732 3.9e-57 225.3 167 74.9
Phvul.011G097600 Phaseolus vulgaris HOM05D006311 ORTHO05D007732 3.9e-57 225.3 189 68.3
Potri.009G161800 Populus trichocarpa HOM05D006311 ORTHO05D007732 3.9e-57 225.3 170 74.1
FAN16G2986 Fragaria x ananassa HOM05D006311 ORTHO05D007732 5.1e-57 224.9 153 79.1
FAN21G2836 Fragaria x ananassa HOM05D006311 ORTHO05D007732 5.1e-57 224.9 194 67.0
AUR62020246 Chenopodium quinoa HOM05D006311 ORTHO05D007732 6.7e-57 224.6 165 71.5
Atru.chr3.3143 Acer truncatum HOM05D006311 ORTHO05D007732 8.8e-57 224.2 161 77.0
Rhsim01G0202100 Rhododendron simsii HOM05D006311 ORTHO05D007732 1.1e-56 223.8 160 76.2
Migut.D02415 Erythranthe guttata HOM05D006311 ORTHO05D007732 1.5e-56 223.4 158 75.3
Carub.0004s0790 Capsella rubella HOM05D006311 ORTHO05D007732 3.3e-56 222.2 186 68.8
Lsat_1_v5_gn_2_35940 Lactuca sativa HOM05D006311 ORTHO05D007732 4.3e-56 221.9 156 76.9
CAN.G745.31 Capsicum annuum HOM05D006311 ORTHO05D007732 5.7e-56 221.5 161 75.8
Lalb_Chr01g0004961 Lupinus albus HOM05D006311 ORTHO05D007732 9.7e-56 220.7 161 73.3
Actinidia07269 Actinidia chinensis HOM05D006311 ORTHO05D007732 1.3e-55 220.3 174 71.8
Oeu048845.1 Olea europaea HOM05D006311 ORTHO05D007732 1.3e-55 220.3 167 73.1
CANSAT54G0913 Cannabis sativa HOM05D006311 ORTHO05D007732 1.7e-55 219.9 169 72.8
MSTRG.21022 Avicennia marina HOM05D006311 ORTHO05D007732 2.2e-55 219.5 158 75.9
Nitab4.5_0001135g0160 Nicotiana tabacum HOM05D006311 ORTHO05D007732 2.2e-55 219.5 159 74.2
Sopen11g027510 Solanum pennellii HOM05D006311 ORTHO05D007732 2.2e-55 219.5 161 75.2
Nn2g14263 Nelumbo nucifera HOM05D006311 ORTHO05D007732 3.7e-55 218.8 152 78.9
Nitab4.5_0000893g0010 Nicotiana tabacum HOM05D006311 ORTHO05D007732 4.8e-55 218.4 151 78.1
PGSC0003DMG400019619 Solanum tuberosum HOM05D006311 ORTHO05D007732 4.8e-55 218.4 161 74.5
BcaB06g28142 Brassica carinata HOM05D006311 ORTHO05D007732 6.3e-55 218.0 189 65.6
BolC4t27194H Brassica oleracea HOM05D006311 ORTHO05D007732 6.3e-55 218.0 188 66.5
TAR623G0571 Trochodendron aralioides HOM05D006311 ORTHO05D007732 8.2e-55 217.6 155 77.4
C04p56680 Brassica napus HOM05D006311 ORTHO05D007732 1.4e-54 216.9 189 65.1
BolC4t27200H Brassica oleracea HOM05D006311 ORTHO05D007732 1.4e-54 216.9 189 65.1
CARHR119830 Cardamine hirsuta HOM05D006311 ORTHO05D007732 1.8e-54 216.5 174 71.3
DCAR_010317 Daucus carota HOM05D006311 ORTHO05D007732 2.4e-54 216.1 169 69.8
Solyc11g068790.2 Solanum lycopersicum HOM05D006311 ORTHO05D007732 2.4e-54 216.1 185 65.9
BcaB06g28139 Brassica carinata HOM05D006311 ORTHO05D007732 3.1e-54 215.7 187 67.4
A04p20870 Brassica napus HOM05D006311 ORTHO05D007732 3.1e-54 215.7 190 64.2
vmacro14327 Vaccinium macrocarpon HOM05D006311 ORTHO05D007732 3.1e-54 215.7 192 65.6
unitig_0.g1470 Utricularia gibba HOM05D006311 ORTHO05D007732 4.1e-54 215.3 156 74.4
Lalb_Chr03g0028331 Lupinus albus HOM05D006311 ORTHO05D007732 5.3e-54 214.9 151 76.2
PSO384G4643 Papaver somniferum HOM05D006311 ORTHO05D007732 5.3e-54 214.9 186 66.7
Sp4g10100 Schrenkiella parvula HOM05D006311 ORTHO05D007732 5.3e-54 214.9 178 68.0
MSTRG.18783 Avicennia marina HOM05D006311 ORTHO05D007732 1.2e-53 213.8 158 74.1
MBI17_g18935_MAGBIO Magnolia biondii HOM05D006311 ORTHO05D007732 1.2e-53 213.8 166 72.9
PSO339G0926 Papaver somniferum HOM05D006311 ORTHO05D007732 1.2e-53 213.8 186 66.1
AL4G21210 Arabidopsis lyrata HOM05D006311 ORTHO05D007732 1.5e-53 213.4 193 64.8
Ca_19458_v3 Cicer arietinum L. HOM05D006311 ORTHO05D007732 1.5e-53 213.4 152 77.6
SGA_v2.0_scaffold7G03983 Striga asiatica HOM05D006311 ORTHO05D007732 1.5e-53 213.4 152 77.6
AT2G27290 Arabidopsis thaliana HOM05D006311 ORTHO05D007732 2.6e-53 212.6 193 65.3
BcaB01g03062 Brassica carinata HOM05D006311 ORTHO05D007732 2.6e-53 212.6 163 69.9
BcaB01g03063 Brassica carinata HOM05D006311 ORTHO05D007732 2.6e-53 212.6 163 69.9
Ca_29924_v3 Cicer arietinum L. HOM05D006311 ORTHO05D007732 4.5e-53 211.8 186 67.7
Aa31LG5G8700 Aethionema arabicum HOM05D006311 ORTHO05D007732 1.3e-52 210.3 176 66.5
Thhalv10002100m.g Eutrema salsugineum HOM05D006311 ORTHO05D007732 3.8e-52 208.8 201 59.7
BraA04t17659Z Brassica rapa HOM05D001305 ORTHO05D007732 5.0e-52 208.4 191 63.4
ECA238G1364 Erigeron canadensis HOM05D006311 ORTHO05D007732 5.5e-51 204.9 132 81.8
Aqoxy4G02682 Aquilegia oxysepala HOM05D006311 ORTHO05D007732 7.2e-51 204.5 160 70.0
THA.LOC104826442 Tarenaya hassleriana HOM05D006311 ORTHO05D007732 1.2e-50 203.8 206 63.6
Hund20941 Selenicereus undatus HOM05D006311 ORTHO05D007732 3.6e-50 202.2 133 81.2
HPP92_023073 Vanilla planifolia HOM05D006311 ORTHO05D007732 3.6e-50 202.2 150 74.7
SEGI_25108 Sequoiadendron giganteum HOM05D006311 ORTHO05D007732 7.9e-50 201.1 148 70.3
EL10Ac7g16320 Beta vulgaris HOM05D006311 ORTHO05D007732 1.8e-49 199.9 162 69.1
CBR_g30935 Chara braunii HOM05D006311 ORTHO05D007732 1.8e-46 189.9 154 65.6
Prupe.6G139600 Prunus persica HOM05D006311 ORTHO05D007732 1.8e-46 189.9 165 67.3
ATR0772G022 Amborella trichopoda HOM05D006311 ORTHO05D007732 4.1e-46 188.7 192 57.3
Mapoly0006s0182 Marchantia polymorpha HOM05D006311 ORTHO05D007732 5.3e-46 188.3 152 66.4
Os04g0416000 Oryza sativa ssp. japonica HOM05D006311 ORTHO05D007732 5.9e-45 184.9 178 60.7
Lj1A261G25 Lonicera japonica HOM05D006311 ORTHO05D007732 7.7e-45 184.5 117 84.6
CDE02G3359 Ceratophyllum demersum HOM05D006311 ORTHO05D007732 1.7e-44 183.3 118 78.8
Haze_23330 Corylus avellana HOM05D006311 ORTHO05D007732 2.9e-44 182.6 120 83.3
Pp3c14_19090 Physcomitrium patens HOM05D006311 ORTHO05D007732 3.8e-44 182.2 155 61.3
AagrBONN_evm.TU.Sc2ySwM_117.22 Anthoceros agrestis HOM05D006311 ORTHO05D007732 6.1e-42 174.9 182 54.4
SGA_v2.0_scaffold114G31957 Striga asiatica HOM05D006311 ORTHO05D007732 6.1e-42 174.9 117 79.5
SMO146G0331 Selaginella moellendorffii HOM05D006311 ORTHO05D007732 8.0e-42 174.5 129 69.8
MD03G1152600 Malus domestica HOM05D006311 ORTHO05D007732 1.1e-38 164.1 108 80.6
MCO12G429 Micromonas commoda HOM05D006311 ORTHO05D007732 2.4e-38 162.9 184 50.5
PRCOL_00001321 Prasinoderma coloniale HOM05D006311 ORTHO05D007732 2.0e-37 159.8 134 66.4
Cre12.g485850 Chlamydomonas reinhardtii HOM05D006311 ORTHO05D007732 1.8e-33 146.7 159 50.3
Gohir.D07G115550 Gossypium hirsutum HOM05D006311 ORTHO05D007732 2.8e-31 139.4 86 87.2
Gohir.A07G112050 Gossypium hirsutum HOM05D006311 ORTHO05D007732 6.3e-31 138.3 90 84.4
Gorai.001G123800 Gossypium raimondii HOM05D006311 ORTHO05D007732 1.1e-30 137.5 86 86.0
BcaC02g08251 Brassica carinata HOM05D006311 ORTHO05D007732 4.1e-30 135.6 148 56.1
BcaC02g08253 Brassica carinata HOM05D006311 ORTHO05D007732 2.0e-29 133.3 185 49.2
BraA04t17657Z Brassica rapa HOM05D006311 ORTHO05D007732 1.0e-25 120.9 86 73.3
Oeu009055.1 Olea europaea HOM05D000182 ORTHO05D000112 7.5e-24 114.8 92 68.5
Actinidia24237 Actinidia chinensis HOM05D006311 ORTHO05D007732 2.8e-23 112.8 138 54.3
A04p20840 Brassica napus HOM05D006311 ORTHO05D007732 3.7e-23 112.5 78 74.4
Zm00001eb422070 Zea mays HOM05D006311 ORTHO05D007732 2.0e-21 106.7 97 61.9
CDE08G1250 Ceratophyllum demersum HOM05D006311 ORTHO05D007732 2.0e-16 90.1 57 73.7
Mapoly0036s0025 Marchantia polymorpha HOM05D006047 ORTHO05D007353 2.6e-08 63.2 105 38.1


User provided reference genes

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