Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Eucgr.J00525 Eucalyptus grandis HOM05D007535 ORTHO05D008520 6.5e-156 554.7 440 100.0
PGR119G1786 Punica granatum HOM05D007535 ORTHO05D008520 2.1e-45 187.6 452 60.2
Thecc.09G278200 Theobroma cacao HOM05D007535 ORTHO05D008520 5.5e-38 162.9 498 43.0
GSVIVG01036079001 Vitis vinifera HOM05D007535 ORTHO05D008520 2.0e-35 154.5 447 56.2
Nitab4.5_0000731g0020 Nicotiana tabacum HOM05D007535 ORTHO05D008520 4.3e-35 153.3 442 57.7
Medtr2g086950 Medicago truncatula HOM05D007535 ORTHO05D008520 5.7e-35 152.9 472 55.5
Psat5g257880 Pisum sativum HOM05D007535 ORTHO05D008520 1.3e-34 151.8 473 50.5
Nitab4.5_0008177g0030 Nicotiana tabacum HOM05D007535 ORTHO05D008520 2.2e-34 151.0 443 55.8
Nn6g34805 Nelumbo nucifera HOM05D007535 ORTHO05D008520 6.3e-34 149.4 417 57.8
Prupe.6G137100 Prunus persica HOM05D007535 ORTHO05D008520 3.8e-31 140.2 494 51.2
Atru.chr3.3166 Acer truncatum HOM05D007535 ORTHO05D008520 6.5e-31 139.4 412 60.2
Cfa009985 Carpinus fangiana HOM05D007535 ORTHO05D008520 1.1e-30 138.7 447 55.3
Ca_01647_v3 Cicer arietinum L. HOM05D002184 ORTHO05D002379 6.1e-29 132.9 479 54.3
TAR633G1755 Trochodendron aralioides HOM05D007535 ORTHO05D008520 1.8e-28 131.3 458 53.1
Glyma.13G314800 Glycine max HOM05D007535 ORTHO05D008520 3.9e-28 130.2 447 55.3
vmacro03328 Vaccinium macrocarpon HOM05D007535 ORTHO05D008520 5.1e-28 129.8 245 40.0
Glyma.12G186700 Glycine max HOM05D007535 ORTHO05D008520 1.5e-27 128.3 473 52.2
Peaxi162Scf00224g00216 Petunia axillaris HOM05D007535 ORTHO05D008520 2.6e-27 127.5 486 52.9
PSO384G1635 Papaver somniferum HOM05D007535 ORTHO05D008520 1.3e-26 125.2 455 47.7
Haze_23344 Corylus avellana HOM05D007535 ORTHO05D008520 2.2e-26 124.4 236 41.1
Gohir.D08G017000 Gossypium hirsutum HOM05D007535 ORTHO05D008520 3.7e-26 123.6 465 45.6
Solyc11g068690.2 Solanum lycopersicum HOM05D007535 ORTHO05D008520 4.8e-26 123.2 523 48.9
Sopen11g027410 Solanum pennellii HOM05D007535 ORTHO05D008520 6.3e-26 122.9 522 48.7
VMungo1080G1542 Vigna mungo HOM05D007535 ORTHO05D008520 1.1e-25 122.1 494 48.2
Gorai.004G011300 Gossypium raimondii HOM05D007535 ORTHO05D008520 1.8e-25 121.3 481 45.1
CAN.G745.17 Capsicum annuum HOM05D007535 ORTHO05D008520 7.0e-25 119.4 494 49.8
Migut.N02473 Erythranthe guttata HOM05D007535 ORTHO05D008520 7.0e-25 119.4 436 54.4
EL10Ac7g16124 Beta vulgaris HOM05D007535 ORTHO05D008520 9.1e-25 119.0 474 41.1
Actinidia07260 Actinidia chinensis HOM05D007535 ORTHO05D008520 1.2e-24 118.6 296 33.1
Cpa.g.sc195.29 Carica papaya HOM05D007535 ORTHO05D008520 1.2e-24 118.6 235 35.7
RcHm_v2.0_Chr5g0046091 Rosa chinensis HOM05D007535 ORTHO05D008520 2.0e-24 117.9 477 51.4
Lalb_Chr24g0393491 Lupinus albus HOM05D007535 ORTHO05D008520 4.5e-24 116.7 233 34.8
PGSC0003DMG400026347 Solanum tuberosum HOM05D007535 ORTHO05D008520 4.5e-24 116.7 517 48.9
MD03G1150100 Malus domestica HOM05D007535 ORTHO05D008520 7.7e-24 115.9 490 50.0
Gohir.A08G006800 Gossypium hirsutum HOM05D007535 ORTHO05D008520 6.5e-23 112.8 480 44.0
Lj3g0000707 Lotus japonicus HOM05D007535 ORTHO05D008520 6.5e-23 112.8 477 43.4
Rhsim13G0113500 Rhododendron simsii HOM05D000001 ORTHO05D000003 6.5e-23 112.8 286 32.2
Hma1.2p1_2164F.1_g315730 Hydrangea macrophylla HOM05D007535 ORTHO05D008520 1.1e-22 112.1 272 33.8
Hma1.2p1_2164F.1_g315740 Hydrangea macrophylla HOM05D007535 ORTHO05D008520 1.5e-22 111.7 271 33.6
FAN25G3072 Fragaria x ananassa HOM05D007535 ORTHO05D008520 2.5e-22 110.9 475 51.4
TWI79G0866 Tripterygium wilfordii HOM05D007535 ORTHO05D008520 7.2e-22 109.4 482 50.2
arahy.Tifrunner.gnm1.ann1.ETK20Z Arachis hypogaea HOM05D007535 ORTHO05D008520 9.4e-22 109.0 475 50.9
FAN21G0330 Fragaria x ananassa HOM05D007535 ORTHO05D008520 9.4e-22 109.0 480 41.2
FvH4_3g25730 Fragaria vesca HOM05D007535 ORTHO05D008520 1.6e-21 108.2 476 50.8
Lj2A969T70 Lonicera japonica HOM05D007535 ORTHO05D008520 2.1e-21 107.8 251 37.1
Ciclev10028368m.g Citrus clementina HOM05D007535 ORTHO05D008520 3.6e-21 107.1 272 35.3
Manes.04G001100 Manihot esculenta HOM05D007535 ORTHO05D008520 4.7e-21 106.7 290 32.1
Potri.004G199200 Populus trichocarpa HOM05D007535 ORTHO05D008520 6.1e-21 106.3 477 49.9
TPR.G4567 Trifolium pratense HOM05D007535 ORTHO05D008520 6.1e-21 106.3 468 49.4
FAN11G3206 Fragaria x ananassa HOM05D007535 ORTHO05D008520 8.0e-21 105.9 487 50.1
HanXRQChr14g0433121 Helianthus annuus HOM05D007535 ORTHO05D008520 1.0e-20 105.5 441 56.0
Ciclev10029981m.g Citrus clementina HOM05D007535 ORTHO05D008520 6.7e-20 102.8 277 32.9
Cc00_g20950 Coffea canephora HOM05D007535 ORTHO05D008520 6.7e-20 102.8 452 53.1
SGA_v2.0_scaffold177G39436 Striga asiatica HOM05D007535 ORTHO05D008520 8.8e-20 102.4 465 42.4
PSO339G0294 Papaver somniferum HOM05D007535 ORTHO05D008520 2.6e-19 100.9 461 41.6
QL01p011831 Quercus lobata HOM05D007535 ORTHO05D008520 3.3e-19 100.5 347 29.1
ClCG01G011770 Citrullus lanatus HOM05D007535 ORTHO05D008520 7.5e-19 99.4 488 46.7
Hund18777 Selenicereus undatus HOM05D007535 ORTHO05D008520 9.7e-19 99.0 291 28.9
Lsat_1_v5_gn_2_34620 Lactuca sativa HOM05D007535 ORTHO05D008520 1.7e-18 98.2 438 47.5
CSS0035480 Camellia sinensis var. sinensis HOM05D007535 ORTHO05D008520 2.8e-18 97.4 304 31.9
CANSAT54G2250 Cannabis sativa HOM05D007535 ORTHO05D008520 6.3e-18 96.3 477 50.7
Sed0017293 Sechium edule HOM05D007535 ORTHO05D008520 6.3e-18 96.3 261 34.1
Sabra04G0134300 Salix brachista HOM05D001716 ORTHO05D004234 1.4e-17 95.1 267 31.8
arahy.Tifrunner.gnm1.ann1.TGP3GH Arachis hypogaea HOM05D007535 ORTHO05D008520 1.8e-17 94.7 483 38.3
Ciclev10028316m.g Citrus clementina HOM05D007535 ORTHO05D008520 9.1e-17 92.4 287 32.1
CDE02G4009 Ceratophyllum demersum HOM05D007535 ORTHO05D008520 2.0e-16 91.3 481 45.1
SalBow3G0383 Salvia bowleyana HOM05D007535 ORTHO05D008520 2.0e-16 91.3 476 50.4
Sc12g0004670 Simmondsia chinensis HOM05D007535 ORTHO05D008520 2.0e-16 91.3 247 36.0
THA.LOC104810927 Tarenaya hassleriana HOM05D007535 ORTHO05D008520 2.0e-16 91.3 452 50.9
unitig_27.g25117 Utricularia gibba HOM05D007535 ORTHO05D008520 2.7e-16 90.9 472 47.5
Oeu024409.1 Olea europaea HOM05D007535 ORTHO05D008520 4.5e-16 90.1 69 60.9
Sc12g0004620 Simmondsia chinensis HOM05D007535 ORTHO05D008520 4.5e-16 90.1 246 35.8
Dinv08923 Davidia involucrata HOM05D007535 ORTHO05D008520 1.0e-15 89.0 221 32.6
MBI17_g01489_MAGBIO Magnolia biondii HOM05D007535 ORTHO05D008520 1.7e-15 88.2 236 30.9
AUR62001527 Chenopodium quinoa HOM05D007535 ORTHO05D008520 5.0e-15 86.7 514 35.6
Zm00001eb140080 Zea mays HOM05D007535 ORTHO05D008520 8.5e-15 85.9 479 48.4
CsaV3_1G015090 Cucumis sativus L. HOM05D007535 ORTHO05D008520 1.9e-14 84.7 482 45.6
Duzib150G0908 Durio zibethinus HOM05D007535 ORTHO05D008520 3.2e-14 84.0 153 40.5
Aqoxy4G02717 Aquilegia oxysepala HOM05D007535 ORTHO05D008520 1.6e-13 81.6 253 29.6
Os01g0966400 Oryza sativa ssp. japonica HOM05D007535 ORTHO05D008520 3.6e-13 80.5 253 31.6
DCAR_024892 Daucus carota HOM05D007535 ORTHO05D008520 6.1e-13 79.7 277 30.3
MELO3C025588.2 Cucumis melo HOM05D007535 ORTHO05D008520 1.4e-12 78.6 270 28.9
CiPaw.14G097800 Carya illinoinensis HOM05D007535 ORTHO05D008520 2.3e-12 77.8 223 32.3
HPP92_011495 Vanilla planifolia HOM05D007535 ORTHO05D008520 3.0e-12 77.4 230 32.2
ECA238G4833 Erigeron canadensis HOM05D007535 ORTHO05D008520 8.8e-12 75.9 333 44.7
Hma1.2p1_2164F.1_g315720 Hydrangea macrophylla HOM05D007535 ORTHO05D008520 1.3e-10 72.0 57 61.4
Aa31LG1G13230 Aethionema arabicum HOM05D012474 ORTHO05D008520 1.7e-10 71.6 252 31.7
Sp6g22920 Schrenkiella parvula HOM05D012474 ORTHO05D008520 2.2e-10 71.2 255 31.0
Actinidia24230 Actinidia chinensis HOM05D007535 ORTHO05D008520 1.4e-09 68.6 61 57.4
MSTRG.12377 Avicennia marina HOM05D007535 ORTHO05D008520 3.1e-09 67.4 500 45.4
Thhalv10013516m.g Eutrema salsugineum HOM05D012474 ORTHO05D008520 9.1e-09 65.9 92 46.7
Phvul.005G122000 Phaseolus vulgaris HOM05D007535 ORTHO05D008520 1.6e-08 65.1 238 30.3
AUR62020256 Chenopodium quinoa HOM05D007535 ORTHO05D008520 2.7e-08 64.3 99 38.4
BcaB08g36440 Brassica carinata HOM05D012474 ORTHO05D008520 4.5e-08 63.5 250 29.2
BraA10t43930Z Brassica rapa HOM05D012474 ORTHO05D008520 1.0e-07 62.4 240 28.8
A10p18500 Brassica napus HOM05D012474 ORTHO05D008520 1.7e-07 61.6 240 28.8
ATR0081G029 Amborella trichopoda HOM05D007535 ORTHO05D008520 2.2e-07 61.2 323 49.5
CARHR191220 Cardamine hirsuta HOM05D012474 ORTHO05D008520 5.0e-07 60.1 239 28.9
FAN16G1906 Fragaria x ananassa HOM05D007535 ORTHO05D008520 8.5e-07 59.3 266 29.3
BcaC04g19565 Brassica carinata HOM05D012474 ORTHO05D008520 3.2e-06 57.4 53 54.7
C09p54250 Brassica napus HOM05D012474 ORTHO05D008520 3.2e-06 57.4 239 28.0
arahy.Tifrunner.gnm1.ann1.28YW2N Arachis hypogaea HOM05D033635 ORTHO05D031606 4.2e-06 57.0 39 64.1
arahy.Tifrunner.gnm1.ann1.BG32VG Arachis hypogaea HOM05D033635 ORTHO05D031606 7.2e-06 56.2 38 65.8
Carub.0006s2006 Capsella rubella HOM05D012474 ORTHO05D008520 9.4e-06 55.8 242 27.7


User provided reference genes

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