Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Eucgr.J00279 Eucalyptus grandis HOM05D007308 ORTHO05D009157 6.2e-126 454.1 228 100.0
Rhsim09G0141500 Rhododendron simsii HOM05D007308 ORTHO05D009157 1.4e-72 276.9 192 70.3
Potri.010G241700 Populus trichocarpa HOM05D007308 ORTHO05D009157 1.1e-71 273.9 182 73.1
THA.LOC104816471 Tarenaya hassleriana HOM05D007308 ORTHO05D009157 5.7e-71 271.6 207 65.2
Thecc.10G116800 Theobroma cacao HOM05D007308 ORTHO05D009157 3.7e-70 268.9 183 73.8
vmacro10315 Vaccinium macrocarpon HOM05D007308 ORTHO05D009157 1.4e-69 266.9 183 71.6
Duzib106G1839 Durio zibethinus HOM05D007308 ORTHO05D009157 6.9e-69 264.6 183 73.2
Hma1.2p1_0457F.1_g156910 Hydrangea macrophylla HOM05D007308 ORTHO05D009157 6.9e-69 264.6 192 66.7
Gohir.D13G010000 Gossypium hirsutum HOM05D007308 ORTHO05D009157 2.0e-68 263.1 169 74.0
Gorai.013G010700 Gossypium raimondii HOM05D007308 ORTHO05D009157 4.5e-68 261.9 180 70.0
Dinv08592 Davidia involucrata HOM05D007308 ORTHO05D009157 5.9e-68 261.5 187 69.5
Sabra10G0189200 Salix brachista HOM05D000139 ORTHO05D000103 5.9e-68 261.5 176 72.7
Gohir.A13G009300 Gossypium hirsutum HOM05D007308 ORTHO05D009157 1.3e-67 260.4 169 73.4
CiPaw.13G043100 Carya illinoinensis HOM05D007308 ORTHO05D009157 2.9e-67 259.2 180 71.7
Prupe.2G071800 Prunus persica HOM05D007308 ORTHO05D009157 3.8e-67 258.8 181 69.1
PGR044G1810 Punica granatum HOM05D007308 ORTHO05D009157 3.8e-67 258.8 222 60.4
MSTRG.27555 Avicennia marina HOM05D007308 ORTHO05D009157 5.0e-67 258.5 192 68.8
CSS0004692 Camellia sinensis var. sinensis HOM05D007308 ORTHO05D009157 5.0e-67 258.5 192 67.7
GSVIVG01034647001 Vitis vinifera HOM05D007308 ORTHO05D009157 6.5e-67 258.1 182 70.3
PGR044G1814 Punica granatum HOM05D007308 ORTHO05D009157 8.5e-67 257.7 222 61.7
CANSAT56G1109 Cannabis sativa HOM05D007308 ORTHO05D009157 7.2e-66 254.6 220 63.2
C03p02230 Brassica napus HOM05D007308 ORTHO05D009157 9.4e-66 254.2 189 66.7
BolC3t12774H Brassica oleracea HOM05D007308 ORTHO05D009157 9.4e-66 254.2 189 66.7
Nn2g14273 Nelumbo nucifera HOM05D007308 ORTHO05D009157 9.4e-66 254.2 178 68.0
Lalb_Chr02g0150981 Lupinus albus HOM05D007308 ORTHO05D009157 1.2e-65 253.8 170 70.6
ECA232G3668 Erigeron canadensis HOM05D007308 ORTHO05D009157 1.6e-65 253.4 201 64.7
QL04p047115 Quercus lobata HOM05D007308 ORTHO05D009157 1.6e-65 253.4 181 68.0
Ciclev10016517m.g Citrus clementina HOM05D007308 ORTHO05D009157 2.1e-65 253.1 207 62.3
CsaV3_5G035250 Cucumis sativus L. HOM05D007308 ORTHO05D009157 3.6e-65 252.3 194 66.5
AL6G14490 Arabidopsis lyrata HOM05D007308 ORTHO05D009157 7.9e-65 251.1 183 66.7
TAR623G1715 Trochodendron aralioides HOM05D007308 ORTHO05D009157 7.9e-65 251.1 183 65.0
HanXRQChr05g0147281 Helianthus annuus HOM05D007308 ORTHO05D009157 1.0e-64 250.8 206 64.1
BcaB01g05916 Brassica carinata HOM05D007308 ORTHO05D009157 1.8e-64 250.0 189 66.1
BcaC06g32190 Brassica carinata HOM05D007308 ORTHO05D009157 3.0e-64 249.2 186 66.1
Sp6g38000 Schrenkiella parvula HOM05D007308 ORTHO05D009157 3.0e-64 249.2 185 65.9
A10p31380 Brassica napus HOM05D007308 ORTHO05D009157 3.9e-64 248.8 176 68.2
Lsat_1_v5_gn_3_53161 Lactuca sativa HOM05D007308 ORTHO05D009157 3.9e-64 248.8 199 64.8
arahy.Tifrunner.gnm1.ann1.I1QH9V Arachis hypogaea HOM05D007308 ORTHO05D009157 8.8e-64 247.7 225 57.8
arahy.Tifrunner.gnm1.ann1.ZU0NEU Arachis hypogaea HOM05D007308 ORTHO05D009157 8.8e-64 247.7 224 58.0
Thhalv10014751m.g Eutrema salsugineum HOM05D007308 ORTHO05D009157 1.1e-63 247.3 176 68.2
AT5G04830 Arabidopsis thaliana HOM05D007308 ORTHO05D009157 1.5e-63 246.9 175 67.4
A03p01870 Brassica napus HOM05D007308 ORTHO05D009157 2.0e-63 246.5 189 65.6
BraA03t09557Z Brassica rapa HOM05D007308 ORTHO05D009157 2.0e-63 246.5 189 65.6
Cc02_g09470 Coffea canephora HOM05D007308 ORTHO05D009157 2.0e-63 246.5 182 64.3
Migut.F00856 Erythranthe guttata HOM05D007308 ORTHO05D009157 2.0e-63 246.5 183 66.1
Sabra08G0011300 Salix brachista HOM05D007308 ORTHO05D009157 2.0e-63 246.5 168 70.8
C09p72050 Brassica napus HOM05D007308 ORTHO05D009157 2.6e-63 246.1 176 67.6
MBI17_g22148_MAGBIO Magnolia biondii HOM05D007308 ORTHO05D009157 2.6e-63 246.1 175 68.0
TWI15G0952 Tripterygium wilfordii HOM05D007308 ORTHO05D009157 4.4e-63 245.4 187 64.2
Aa31LG11G5650 Aethionema arabicum HOM05D007308 ORTHO05D009157 7.4e-63 244.6 170 68.8
ClCG05G021890 Citrullus lanatus HOM05D007308 ORTHO05D009157 9.7e-63 244.2 199 62.3
Carub.0006s0371 Capsella rubella HOM05D007308 ORTHO05D009157 1.3e-62 243.8 176 65.9
Lj5g0023307 Lotus japonicus HOM05D007308 ORTHO05D009157 1.7e-62 243.4 170 68.8
MD07G1062000 Malus domestica HOM05D007308 ORTHO05D009157 3.7e-62 242.3 194 63.9
BolC9t59950H Brassica oleracea HOM05D007308 ORTHO05D009157 4.8e-62 241.9 194 63.4
BraA10t45184Z Brassica rapa HOM05D007308 ORTHO05D009157 6.3e-62 241.5 184 65.2
Glyma.20G194000 Glycine max HOM05D007308 ORTHO05D009157 6.3e-62 241.5 157 70.7
Medtr1g090630 Medicago truncatula HOM05D007308 ORTHO05D009157 8.2e-62 241.1 178 67.4
Glyma.10G196200 Glycine max HOM05D007308 ORTHO05D009157 1.4e-61 240.4 157 70.7
Sed0004755 Sechium edule HOM05D007308 ORTHO05D009157 1.4e-61 240.4 170 68.8
CARHR208450 Cardamine hirsuta HOM05D007308 ORTHO05D009157 1.8e-61 240.0 185 63.8
Haze_03470 Corylus avellana HOM05D007308 ORTHO05D009157 1.8e-61 240.0 237 58.2
Sed0002245 Sechium edule HOM05D007308 ORTHO05D009157 2.4e-61 239.6 181 66.9
Sc20g0001110 Simmondsia chinensis HOM05D007308 ORTHO05D009157 4.1e-61 238.8 169 69.2
Nitab4.5_0001047g0020 Nicotiana tabacum HOM05D007308 ORTHO05D009157 9.1e-61 237.7 157 72.0
Aqoxy1G00692 Aquilegia oxysepala HOM05D007308 ORTHO05D009157 2.0e-60 236.5 174 67.2
Phvul.007G138800 Phaseolus vulgaris HOM05D007308 ORTHO05D009157 2.0e-60 236.5 172 65.7
SalBow3G3836 Salvia bowleyana HOM05D007308 ORTHO05D009157 2.6e-60 236.1 192 63.5
Peaxi162Scf00725g00524 Petunia axillaris HOM05D007308 ORTHO05D009157 7.7e-60 234.6 186 63.4
CDE02G0914 Ceratophyllum demersum HOM05D007308 ORTHO05D009157 1.7e-59 233.4 175 63.4
PGSC0003DMG400001980 Solanum tuberosum HOM05D007308 ORTHO05D009157 1.7e-59 233.4 184 66.3
VMungo0720G2616 Vigna mungo HOM05D007308 ORTHO05D009157 3.8e-59 232.3 157 68.8
Hund06794 Selenicereus undatus HOM05D007308 ORTHO05D009157 6.5e-59 231.5 216 56.0
PSO339G2601 Papaver somniferum HOM05D007308 ORTHO05D009157 8.5e-59 231.1 176 62.5
unitig_32.g11899 Utricularia gibba HOM05D007308 ORTHO05D009157 8.5e-59 231.1 180 63.3
Lalb_Chr21g0312841 Lupinus albus HOM05D007308 ORTHO05D009157 1.1e-58 230.7 156 68.6
PSO384G3587 Papaver somniferum HOM05D007308 ORTHO05D009157 9.4e-58 227.6 176 61.4
Lj3C924T9 Lonicera japonica HOM05D007308 ORTHO05D009157 2.7e-57 226.1 218 56.0
HPP92_005473 Vanilla planifolia HOM05D007308 ORTHO05D009157 6.7e-56 221.5 205 55.1
Zm00001eb362380 Zea mays HOM05D007308 ORTHO05D009157 8.8e-56 221.1 156 64.7
Os01g0965900 Oryza sativa ssp. japonica HOM05D007308 ORTHO05D009157 1.1e-55 220.7 155 67.7
SGA_v2.0_scaffold272G46352 Striga asiatica HOM05D007308 ORTHO05D009157 1.1e-55 220.7 247 49.8
ATR0772G202 Amborella trichopoda HOM05D007308 ORTHO05D009157 1.1e-53 214.2 175 59.4
CSS0017788 Camellia sinensis var. sinensis HOM05D007308 ORTHO05D009157 2.0e-52 209.9 178 61.2
MELO3C012339.2 Cucumis melo HOM05D007308 ORTHO05D009157 1.5e-50 203.8 141 70.9
Sopen11g002410 Solanum pennellii HOM05D007308 ORTHO05D009157 6.1e-49 198.4 140 69.3
Solyc11g006505.1 Solanum lycopersicum HOM05D007308 ORTHO05D009157 8.0e-49 198.0 140 68.6
CiPaw.14G034600 Carya illinoinensis HOM05D007308 ORTHO05D009157 4.0e-48 195.7 236 50.8
Mapoly0021s0141 Marchantia polymorpha HOM05D007308 ORTHO05D009157 2.6e-47 193.0 186 52.7
SMO143G0271 Selaginella moellendorffii HOM05D007308 ORTHO05D009157 2.8e-46 189.5 156 62.8
Actinidia34730 Actinidia chinensis HOM05D000139 ORTHO05D000103 4.8e-46 188.7 134 69.4
AagrBONN_evm.TU.Sc2ySwM_344.2550 Anthoceros agrestis HOM05D007308 ORTHO05D009157 8.3e-46 188.0 159 59.7
SEGI_14438 Sequoiadendron giganteum HOM05D007308 ORTHO05D009157 1.8e-45 186.8 169 55.0
RcHm_v2.0_Chr1g0331851 Rosa chinensis HOM05D007308 ORTHO05D009157 5.4e-45 185.3 137 67.2
Pp3c14_20980 Physcomitrium patens HOM05D007308 ORTHO05D009157 2.7e-44 183.0 168 53.6
Pp3c19_15880 Physcomitrium patens HOM05D007308 ORTHO05D009157 6.5e-43 178.3 152 55.9
Manes.10G060700 Manihot esculenta HOM05D007308 ORTHO05D009157 6.1e-41 171.8 120 68.3
SMO265G0003 Selaginella moellendorffii HOM05D007308 ORTHO05D009157 6.1e-41 171.8 152 60.5
SEGI_29808 Sequoiadendron giganteum HOM05D007308 ORTHO05D009157 8.0e-41 171.4 127 64.6
BcaNung05151 Brassica carinata HOM05D007308 ORTHO05D009157 1.1e-34 151.0 203 47.8
Pp3c1_28520 Physcomitrium patens HOM05D007308 ORTHO05D009157 1.6e-33 147.1 119 61.3
Potri.008G017701 Populus trichocarpa HOM05D007308 ORTHO05D009157 1.7e-27 127.1 83 67.5
Atru.BG.262.p Acer truncatum HOM05D007308 ORTHO05D009157 7.3e-26 121.7 80 72.5
Pp3c2_31450 Physcomitrium patens HOM05D007308 ORTHO05D009157 7.0e-21 105.1 118 50.8
CBR_g30213 Chara braunii HOM05D007308 ORTHO05D009157 1.2e-20 104.4 150 39.3
Actinidia27055 Actinidia chinensis HOM05D007308 ORTHO05D009157 2.1e-12 77.0 83 53.0
PGSC0003DMG400007605 Solanum tuberosum HOM05D000011 ORTHO05D000018 1.6e-09 67.4 47 57.4
Sopen11g002430 Solanum pennellii HOM05D000011 ORTHO05D000018 2.0e-07 60.5 52 50.0
Cfa027317 Carpinus fangiana HOM05D007308 ORTHO05D009157 6.4e-06 55.5 124 31.5


User provided reference genes

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