Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Eucgr.J00246 Eucalyptus grandis HOM05D006228 ORTHO05D007847 8.3e-241 836.6 429 100.0
PGR044G0451 Punica granatum HOM05D006228 ORTHO05D007847 1.5e-125 453.8 414 61.6
TAR633G1830 Trochodendron aralioides HOM05D006228 ORTHO05D007847 7.0e-123 444.9 449 53.9
Haze_17175 Corylus avellana HOM05D006228 ORTHO05D007847 1.2e-122 444.1 449 55.2
TWI09G0225 Tripterygium wilfordii HOM05D006228 ORTHO05D007847 4.6e-122 442.2 441 55.3
CiPaw.01G295100 Carya illinoinensis HOM05D006228 ORTHO05D007847 1.7e-121 440.3 442 55.0
MD07G1212900 Malus domestica HOM05D006228 ORTHO05D007847 7.3e-120 434.9 444 54.5
Dinv34431 Davidia involucrata HOM05D006228 ORTHO05D007847 2.8e-119 433.0 448 52.9
Actinidia13913 Actinidia chinensis HOM05D006228 ORTHO05D007847 4.0e-118 429.1 444 54.1
Potri.008G063500 Populus trichocarpa HOM05D006228 ORTHO05D007847 2.0e-117 426.8 450 54.7
Prupe.2G245100 Prunus persica HOM05D006228 ORTHO05D007847 9.9e-117 424.5 449 53.2
Nn2g13585 Nelumbo nucifera HOM05D006228 ORTHO05D007847 4.1e-115 419.1 441 53.5
Cfa005508 Carpinus fangiana HOM05D006228 ORTHO05D007847 7.1e-115 418.3 452 52.2
GSVIVG01016380001 Vitis vinifera HOM05D006228 ORTHO05D007847 2.7e-114 416.4 441 51.7
Rhsim09G0171700 Rhododendron simsii HOM05D006228 ORTHO05D007847 7.8e-114 414.8 465 51.4
CSS0000174 Camellia sinensis var. sinensis HOM05D006228 ORTHO05D007847 8.6e-113 411.4 442 53.4
Manes.10G018500 Manihot esculenta HOM05D006228 ORTHO05D007847 5.6e-112 408.7 443 53.0
CSS0026214 Camellia sinensis var. sinensis HOM05D006228 ORTHO05D007847 7.3e-112 408.3 442 52.9
CsaV3_5G008840 Cucumis sativus L. HOM05D006228 ORTHO05D007847 5.2e-110 402.1 442 51.4
RcHm_v2.0_Chr1g0369221 Rosa chinensis HOM05D006228 ORTHO05D007847 8.9e-110 401.4 442 51.8
Sabra08G0046800 Salix brachista HOM05D006228 ORTHO05D007847 2.6e-109 399.8 432 54.4
FAN03G1418 Fragaria x ananassa HOM05D006228 ORTHO05D007847 8.4e-108 394.8 439 51.0
Sed0002982 Sechium edule HOM05D006228 ORTHO05D007847 2.7e-106 389.8 442 51.1
Cc02_g06990 Coffea canephora HOM05D006228 ORTHO05D007847 7.8e-106 388.3 455 50.5
FAN06G4757 Fragaria x ananassa HOM05D006228 ORTHO05D007847 6.6e-105 385.2 442 50.2
MBI14_g08147_MAGBIO Magnolia biondii HOM05D006228 ORTHO05D007847 6.6e-105 385.2 438 50.2
Medtr3g070010 Medicago truncatula HOM05D006228 ORTHO05D007847 6.6e-105 385.2 453 47.5
FAN01G0169 Fragaria x ananassa HOM05D006228 ORTHO05D007847 1.1e-104 384.4 442 50.0
ClCG11G010510 Citrullus lanatus HOM05D006228 ORTHO05D007847 1.5e-104 384.0 443 49.7
FvH4_7g23870 Fragaria vesca HOM05D006228 ORTHO05D007847 1.9e-104 383.6 449 49.4
Glyma.18G031000 Glycine max HOM05D006228 ORTHO05D007847 4.3e-104 382.5 445 50.6
Thecc.10G027500 Theobroma cacao HOM05D006228 ORTHO05D007847 5.6e-104 382.1 460 47.8
Aqoxy1G00736 Aquilegia oxysepala HOM05D006228 ORTHO05D007847 3.6e-103 379.4 436 49.5
COL.COLO4_25614 Corchorus olitorius HOM05D006228 ORTHO05D007847 3.6e-103 379.4 444 49.1
Ca_17139_v3 Cicer arietinum L. HOM05D006228 ORTHO05D007847 1.8e-102 377.1 452 47.3
VMungo1383G2528 Vigna mungo HOM05D006228 ORTHO05D007847 1.8e-102 377.1 444 50.5
Gorai.010G199300 Gossypium raimondii HOM05D006228 ORTHO05D007847 2.4e-102 376.7 446 48.9
Peaxi162Scf00401g00030 Petunia axillaris HOM05D006228 ORTHO05D007847 2.4e-102 376.7 419 50.6
Gohir.D06G170400 Gossypium hirsutum HOM05D006228 ORTHO05D007847 4.0e-102 375.9 447 48.8
TPR.G29810 Trifolium pratense HOM05D006228 ORTHO05D007847 5.3e-102 375.6 467 46.0
Aqoxy3G00589 Aquilegia oxysepala HOM05D006228 ORTHO05D007847 6.9e-102 375.2 436 48.9
Lalb_Chr18g0052781 Lupinus albus HOM05D006228 ORTHO05D007847 9.0e-102 374.8 457 48.4
Nitab4.5_0012179g0020 Nicotiana tabacum HOM05D006228 ORTHO05D007847 3.4e-101 372.9 470 47.9
Psat5g127520 Pisum sativum HOM05D006228 ORTHO05D007847 5.8e-101 372.1 452 46.5
PGSC0003DMG400007303 Solanum tuberosum HOM05D006228 ORTHO05D007847 7.6e-101 371.7 445 49.0
MELO3C025144.2 Cucumis melo HOM05D006228 ORTHO05D007847 9.9e-101 371.3 435 49.9
Gohir.A06G164900 Gossypium hirsutum HOM05D006228 ORTHO05D007847 2.2e-100 370.2 448 48.2
CAN.G1280.21 Capsicum annuum HOM05D006228 ORTHO05D007847 2.4e-99 366.7 445 47.9
arahy.Tifrunner.gnm1.ann1.H1F5T1 Arachis hypogaea HOM05D006228 ORTHO05D007847 4.2e-99 365.9 451 48.8
Sopen06g004350 Solanum pennellii HOM05D006228 ORTHO05D007847 7.1e-99 365.2 452 47.8
Oeu006660.1 Olea europaea HOM05D006228 ORTHO05D007847 1.2e-98 364.4 439 49.4
Solyc06g009690.3 Solanum lycopersicum HOM05D006228 ORTHO05D007847 1.2e-98 364.4 445 47.9
AUR62022833 Chenopodium quinoa HOM05D006228 ORTHO05D007847 2.1e-98 363.6 437 47.8
PSO384G3635 Papaver somniferum HOM05D006228 ORTHO05D007847 2.1e-98 363.6 441 48.3
Thhalv10016686m.g Eutrema salsugineum HOM05D006228 ORTHO05D007847 3.5e-98 362.8 438 46.8
Migut.F00709 Erythranthe guttata HOM05D006228 ORTHO05D007847 4.6e-98 362.5 440 48.4
Lj6g0016911 Lotus japonicus HOM05D006228 ORTHO05D007847 7.8e-98 361.7 452 47.1
THA.LOC104810050 Tarenaya hassleriana HOM05D006228 ORTHO05D007847 1.7e-97 360.5 441 47.8
Nitab4.5_0000278g0180 Nicotiana tabacum HOM05D006228 ORTHO05D007847 2.3e-97 360.1 429 49.2
Phvul.001G239600 Phaseolus vulgaris HOM05D006228 ORTHO05D007847 1.1e-96 357.8 443 49.9
Lj1A949T58 Lonicera japonica HOM05D006228 ORTHO05D007847 1.5e-96 357.5 460 46.5
SGA_v2.0_scaffold2G01060 Striga asiatica HOM05D006228 ORTHO05D007847 1.9e-96 357.1 441 48.1
vmacro10067 Vaccinium macrocarpon HOM05D006228 ORTHO05D007847 7.3e-96 355.1 488 45.7
Hund13827 Selenicereus undatus HOM05D006228 ORTHO05D007847 4.8e-95 352.4 503 43.9
EL10Ac2g04780 Beta vulgaris HOM05D006228 ORTHO05D007847 8.1e-95 351.7 432 46.8
SHI03521 Sapria himalayana HOM05D006228 ORTHO05D007847 1.1e-94 351.3 421 47.7
Hma1.2p1_0026F.1_g016930 Hydrangea macrophylla HOM05D006228 ORTHO05D007847 1.4e-94 350.9 320 58.1
Sp4g22220 Schrenkiella parvula HOM05D006228 ORTHO05D007847 5.3e-94 349.0 439 44.6
Aa31LG5G19710 Aethionema arabicum HOM05D006228 ORTHO05D007847 1.5e-93 347.4 435 44.6
AL4G37490 Arabidopsis lyrata HOM05D006228 ORTHO05D007847 7.6e-93 345.1 440 44.3
AT2G39910 Arabidopsis thaliana HOM05D006228 ORTHO05D007847 2.2e-92 343.6 441 44.4
C03p26500 Brassica napus HOM05D006228 ORTHO05D007847 2.9e-92 343.2 435 45.3
AUR62012200 Chenopodium quinoa HOM05D006228 ORTHO05D007847 2.9e-92 343.2 429 45.9
BolC3t15036H Brassica oleracea HOM05D006228 ORTHO05D007847 1.9e-91 340.5 429 45.5
A03p22360 Brassica napus HOM05D006228 ORTHO05D007847 4.2e-91 339.3 429 45.2
BraA03t11466Z Brassica rapa HOM05D006228 ORTHO05D007847 9.3e-91 338.2 429 45.5
BcaB01g03579 Brassica carinata HOM05D006228 ORTHO05D007847 3.5e-90 336.3 461 44.0
Carub.0004s2204 Capsella rubella HOM05D006228 ORTHO05D007847 3.5e-90 336.3 439 44.6
HanXRQChr09g0246891 Helianthus annuus HOM05D006228 ORTHO05D007847 2.3e-89 333.6 444 44.4
CARHR134830 Cardamine hirsuta HOM05D006228 ORTHO05D007847 5.1e-89 332.4 429 45.2
Ah.16g103060 Amaranthus hybridus HOM05D006228 ORTHO05D007847 6.7e-89 332.0 431 46.4
Cpa.g.sc19.228 Carica papaya HOM05D006228 ORTHO05D007847 8.7e-89 331.6 408 47.8
SalBow5G2373 Salvia bowleyana HOM05D006228 ORTHO05D007847 3.3e-88 329.7 416 47.6
BcaC01g05454 Brassica carinata HOM05D006228 ORTHO05D007847 5.6e-88 328.9 435 44.1
Duzib106G2031 Durio zibethinus HOM05D006228 ORTHO05D007847 7.4e-88 328.6 461 45.1
Sc11g0007370 Simmondsia chinensis HOM05D006228 ORTHO05D007847 3.7e-87 326.2 373 49.3
ATR0580G418 Amborella trichopoda HOM05D006228 ORTHO05D007847 6.2e-87 325.5 423 45.2
ECA232G3403 Erigeron canadensis HOM05D006228 ORTHO05D007847 2.4e-86 323.6 455 43.7
FAN10G3493 Fragaria x ananassa HOM05D006228 ORTHO05D007847 3.1e-86 323.2 451 45.5
Lsat_1_v5_gn_9_63220 Lactuca sativa HOM05D006228 ORTHO05D007847 7.1e-83 312.0 417 46.5
Ciclev10031701m.g Citrus clementina HOM05D006228 ORTHO05D007847 1.2e-82 311.2 438 44.7
PSO585G0034 Papaver somniferum HOM05D006228 ORTHO05D007847 7.9e-82 308.5 310 54.5
Zm00001eb226270 Zea mays HOM05D006228 ORTHO05D007847 1.3e-79 301.2 450 42.0
Atru.chr12.264 Acer truncatum HOM05D006228 ORTHO05D007847 1.6e-79 300.8 388 47.2
Os06g0694100 Oryza sativa ssp. japonica HOM05D006228 ORTHO05D007847 1.5e-77 294.3 438 41.3
DCAR_011778 Daucus carota HOM05D006228 ORTHO05D007847 5.8e-77 292.4 436 42.7
arahy.Tifrunner.gnm1.ann1.PGVU2S Arachis hypogaea HOM05D006228 ORTHO05D007847 3.9e-73 279.6 414 43.2
FAN06G0021 Fragaria x ananassa HOM05D006228 ORTHO05D007847 2.8e-71 273.5 297 51.9
unitig_747.g21715 Utricularia gibba HOM05D006228 ORTHO05D007847 1.8e-65 254.2 448 40.0
SEGI_03712 Sequoiadendron giganteum HOM05D006228 ORTHO05D007847 1.4e-62 244.6 433 35.8
BcaC02g07378 Brassica carinata HOM05D006228 ORTHO05D007847 9.4e-59 231.9 281 47.3
CDE05G2573 Ceratophyllum demersum HOM05D006228 ORTHO05D007847 3.0e-57 226.9 339 40.4
HPP92_018568 Vanilla planifolia HOM05D006228 ORTHO05D007847 1.2e-53 214.9 298 41.6
MSTRG.8975 Avicennia marina HOM05D006228 ORTHO05D007847 5.0e-44 183.0 229 49.3
Sed0008304 Sechium edule HOM05D006228 ORTHO05D007847 4.2e-43 179.9 382 38.2
BcaB06g29116 Brassica carinata HOM05D006228 ORTHO05D007847 6.8e-41 172.6 225 43.1
AagrBONN_evm.TU.Sc2ySwM_344.5121 Anthoceros agrestis HOM05D006228 ORTHO05D007847 1.2e-40 171.8 437 32.3
QL08p062537 Quercus lobata HOM05D006228 ORTHO05D007847 9.4e-35 152.1 104 72.1
Actinidia25353 Actinidia chinensis HOM05D006228 ORTHO05D007847 1.4e-33 148.3 134 55.2
Mapoly0014s0032 Marchantia polymorpha HOM05D006228 ORTHO05D007847 2.6e-32 144.1 368 30.2
Pp3c11_8050 Physcomitrium patens HOM05D006228 ORTHO05D007847 2.2e-31 141.0 285 34.0
Actinidia00930 Actinidia chinensis HOM05D006228 ORTHO05D007847 3.7e-31 140.2 112 63.4
RcHm_v2.0_Chr2g0110551 Rosa chinensis HOM05D006228 ORTHO05D007847 4.1e-30 136.7 117 59.0
SMO273G0042 Selaginella moellendorffii HOM05D006228 ORTHO05D007847 7.7e-29 132.5 170 39.4
HPP92_018569 Vanilla planifolia HOM05D006228 ORTHO05D007847 1.3e-23 115.2 105 53.3
RcHm_v2.0_Chr1g0339731 Rosa chinensis HOM05D006228 ORTHO05D007847 4.7e-18 96.7 112 48.2
SMO147G0063 Selaginella moellendorffii HOM05D006228 ORTHO05D007847 1.5e-16 91.7 403 25.1
arahy.Tifrunner.gnm1.ann1.DSNI2G Arachis hypogaea HOM05D002669 ORTHO05D003001 4.4e-16 90.1 94 47.9
arahy.Tifrunner.gnm1.ann1.YTZ5F3 Arachis hypogaea HOM05D006228 ORTHO05D007847 3.7e-15 87.0 58 67.2
MCO16G020 Micromonas commoda HOM05D006228 ORTHO05D007847 9.8e-08 62.4 419 21.2


User provided reference genes

Program Settings