Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Eucgr.J00197 Eucalyptus grandis HOM05D007537 ORTHO05D009602 1.4e-154 549.7 302 100.0
CSS0001440 Camellia sinensis var. sinensis HOM05D007537 ORTHO05D009602 4.9e-78 295.4 302 54.3
CSS0047961 Camellia sinensis var. sinensis HOM05D007537 ORTHO05D009602 2.4e-77 293.1 302 54.0
Rhsim09G0177700 Rhododendron simsii HOM05D007537 ORTHO05D009602 2.4e-77 293.1 301 52.5
Actinidia13942 Actinidia chinensis HOM05D007537 ORTHO05D009602 3.5e-76 289.3 300 52.3
vmacro10037 Vaccinium macrocarpon HOM05D007537 ORTHO05D009602 2.3e-75 286.6 301 51.2
COL.COLO4_25746 Corchorus olitorius HOM05D007537 ORTHO05D009602 5.0e-75 285.4 301 51.8
Duzib114G0965 Durio zibethinus HOM05D007537 ORTHO05D009602 4.3e-74 282.3 302 51.3
Thecc.10G014900 Theobroma cacao HOM05D007537 ORTHO05D009602 2.1e-73 280.0 300 50.3
Cfa001307 Carpinus fangiana HOM05D007537 ORTHO05D009602 3.6e-73 279.3 301 53.5
CSS0034530 Camellia sinensis var. sinensis HOM05D007537 ORTHO05D009602 3.1e-72 276.2 300 52.3
Manes.07G130900 Manihot esculenta HOM05D007537 ORTHO05D009602 4.4e-71 272.3 300 51.7
PGR044G1397 Punica granatum HOM05D007537 ORTHO05D009602 1.3e-70 270.8 302 50.7
Glyma.02G257900 Glycine max HOM05D007537 ORTHO05D009602 6.4e-70 268.5 303 52.8
Peaxi162Scf00284g01051 Petunia axillaris HOM05D007537 ORTHO05D009602 1.4e-69 267.3 301 49.2
CiPaw.01G299800 Carya illinoinensis HOM05D007537 ORTHO05D009602 3.2e-69 266.2 303 52.5
Ca_05971_v3 Cicer arietinum L. HOM05D007537 ORTHO05D009602 4.6e-68 262.3 308 49.4
Ca_05972_v3 Cicer arietinum L. HOM05D007537 ORTHO05D009602 4.6e-68 262.3 308 49.4
arahy.Tifrunner.gnm1.ann1.EU49LP Arachis hypogaea HOM05D007537 ORTHO05D009602 1.3e-67 260.8 312 49.7
Prupe.2G251400 Prunus persica HOM05D007537 ORTHO05D009602 1.7e-67 260.4 307 52.4
Ciclev10031789m.g Citrus clementina HOM05D007537 ORTHO05D009602 2.3e-67 260.0 301 49.5
Sabra08G0051400 Salix brachista HOM05D007537 ORTHO05D009602 2.3e-67 260.0 298 50.7
LjContig00357g0012610 Lotus japonicus HOM05D007537 ORTHO05D009602 3.9e-67 259.2 304 49.7
TAR633G2636 Trochodendron aralioides HOM05D007537 ORTHO05D009602 3.9e-67 259.2 302 50.3
Nn2g10869 Nelumbo nucifera HOM05D007537 ORTHO05D009602 5.0e-67 258.8 311 57.2
Nitab4.5_0000797g0160 Nicotiana tabacum HOM05D007537 ORTHO05D009602 6.6e-67 258.5 309 47.6
Phvul.008G223100 Phaseolus vulgaris HOM05D007537 ORTHO05D009602 6.6e-67 258.5 307 54.7
VMungo0647G0018 Vigna mungo HOM05D007537 ORTHO05D009602 6.6e-67 258.5 303 47.9
Haze_17238 Corylus avellana HOM05D007537 ORTHO05D009602 8.6e-67 258.1 301 51.5
RcHm_v2.0_Chr1g0370441 Rosa chinensis HOM05D007537 ORTHO05D009602 1.1e-66 257.7 321 48.0
Psat2g031640 Pisum sativum HOM05D007537 ORTHO05D009602 1.9e-66 256.9 302 50.0
Potri.008G069800 Populus trichocarpa HOM05D007537 ORTHO05D009602 1.9e-66 256.9 302 50.3
FAN03G1922 Fragaria x ananassa HOM05D007537 ORTHO05D009602 2.5e-66 256.5 318 49.4
Gorai.013G017500 Gossypium raimondii HOM05D007537 ORTHO05D009602 2.5e-66 256.5 305 48.2
FAN06G1236 Fragaria x ananassa HOM05D007537 ORTHO05D009602 4.3e-66 255.8 319 48.3
Solyc06g051360.3 Solanum lycopersicum HOM05D007537 ORTHO05D009602 4.3e-66 255.8 301 48.2
Medtr5g082850 Medicago truncatula HOM05D007537 ORTHO05D009602 1.2e-65 254.2 307 49.5
FAN10G0956 Fragaria x ananassa HOM05D007537 ORTHO05D009602 1.6e-65 253.8 321 48.3
arahy.Tifrunner.gnm1.ann1.QLS93X Arachis hypogaea HOM05D007537 ORTHO05D009602 3.6e-65 252.7 322 47.2
Cc02_g06360 Coffea canephora HOM05D007537 ORTHO05D009602 4.7e-65 252.3 300 45.7
FAN01G2979 Fragaria x ananassa HOM05D007537 ORTHO05D009602 8.1e-65 251.5 319 49.2
Nitab4.5_0008231g0020 Nicotiana tabacum HOM05D007537 ORTHO05D009602 1.1e-64 251.1 308 47.1
Sopen06g017350 Solanum pennellii HOM05D007537 ORTHO05D009602 1.1e-64 251.1 302 48.3
FvH4_7g24610 Fragaria vesca HOM05D007537 ORTHO05D009602 1.8e-64 250.4 319 47.6
Gohir.D13G016000 Gossypium hirsutum HOM05D007537 ORTHO05D009602 1.8e-64 250.4 305 47.2
Lsat_1_v5_gn_8_12620 Lactuca sativa HOM05D007537 ORTHO05D009602 6.8e-64 248.4 301 46.5
ClCG07G004310 Citrullus lanatus HOM05D007537 ORTHO05D009602 1.2e-63 247.7 300 48.3
Hund13875 Selenicereus undatus HOM05D007537 ORTHO05D009602 2.6e-63 246.5 311 45.7
THA.LOC104823184 Tarenaya hassleriana HOM05D007537 ORTHO05D009602 3.4e-63 246.1 298 48.0
DCAR_011821 Daucus carota HOM05D007537 ORTHO05D009602 2.2e-62 243.4 301 46.5
PGSC0003DMG400024236 Solanum tuberosum HOM05D007537 ORTHO05D009602 3.2e-61 239.6 305 46.2
Lalb_Chr04g0250531 Lupinus albus HOM05D007537 ORTHO05D009602 6.0e-60 235.3 304 54.6
HanXRQChr08g0221761 Helianthus annuus HOM05D007537 ORTHO05D009602 1.3e-59 234.2 301 45.5
Thhalv10020993m.g Eutrema salsugineum HOM05D007537 ORTHO05D009602 6.6e-59 231.9 295 45.8
TPR.G38413 Trifolium pratense HOM05D007537 ORTHO05D009602 1.1e-58 231.1 320 46.6
Aa31LG3G4310 Aethionema arabicum HOM05D007537 ORTHO05D009602 7.3e-58 228.4 294 49.0
AUR62022900 Chenopodium quinoa HOM05D007537 ORTHO05D009602 7.3e-58 228.4 325 43.7
GSVIVG01032801001 Vitis vinifera HOM05D007537 ORTHO05D009602 9.5e-58 228.0 228 53.9
AUR62012265 Chenopodium quinoa HOM05D007537 ORTHO05D009602 1.1e-56 224.6 328 46.6
ECA233G1171 Erigeron canadensis HOM05D007537 ORTHO05D009602 1.8e-56 223.8 294 43.9
Ah.10g036610 Amaranthus hybridus HOM05D007537 ORTHO05D009602 2.3e-56 223.4 310 47.4
Sp3g09450 Schrenkiella parvula HOM05D007537 ORTHO05D009602 4.0e-56 222.6 294 47.3
BcaB04g21148 Brassica carinata HOM05D007537 ORTHO05D009602 6.8e-56 221.9 289 45.0
BolC1t05333H Brassica oleracea HOM05D007537 ORTHO05D009602 6.8e-56 221.9 289 43.9
Sed0013636 Sechium edule HOM05D007537 ORTHO05D009602 6.8e-56 221.9 298 45.3
PSO384G1417 Papaver somniferum HOM05D007537 ORTHO05D009602 1.2e-55 221.1 334 42.2
BcaC09g48157 Brassica carinata HOM05D007537 ORTHO05D009602 3.4e-55 219.5 289 43.9
MSTRG.27338 Avicennia marina HOM05D007537 ORTHO05D009602 7.6e-55 218.4 305 46.6
Carub.0003s1045 Capsella rubella HOM05D007537 ORTHO05D009602 1.7e-54 217.2 289 42.2
CARHR085730 Cardamine hirsuta HOM05D007537 ORTHO05D009602 2.2e-54 216.9 289 45.3
Aqoxy2G00863 Aquilegia oxysepala HOM05D007537 ORTHO05D009602 3.7e-54 216.1 306 42.2
Dinv21742 Davidia involucrata HOM05D007537 ORTHO05D009602 6.4e-54 215.3 217 55.3
MBI03_g40958_MAGBIO Magnolia biondii HOM05D007537 ORTHO05D009602 1.4e-53 214.2 310 43.5
AL3G22670 Arabidopsis lyrata HOM05D007537 ORTHO05D009602 4.1e-53 212.6 290 46.9
AT3G11150 Arabidopsis thaliana HOM05D007537 ORTHO05D009602 9.2e-53 211.5 291 44.7
Migut.F00693 Erythranthe guttata HOM05D007537 ORTHO05D009602 1.1e-50 204.5 310 42.6
Gohir.A13G014800 Gossypium hirsutum HOM05D007537 ORTHO05D009602 1.1e-48 198.0 204 52.9
SGA_v2.0_scaffold44G16701 Striga asiatica HOM05D007537 ORTHO05D009602 1.1e-48 198.0 301 40.5
BraA01t04198Z Brassica rapa HOM05D007537 ORTHO05D009602 6.8e-48 195.3 289 40.5
Sc10g0002440 Simmondsia chinensis HOM05D007537 ORTHO05D009602 1.1e-42 177.9 309 37.9
EL10Ac2g04847 Beta vulgaris HOM05D007537 ORTHO05D009602 1.8e-40 170.6 308 37.0
CsaV3_5G010250 Cucumis sativus L. HOM05D007537 ORTHO05D009602 5.3e-40 169.1 181 50.3
MELO3C026792.2 Cucumis melo HOM05D007537 ORTHO05D009602 9.0e-40 168.3 182 50.5
BcaB04g21146 Brassica carinata HOM05D007537 ORTHO05D009602 2.1e-33 147.1 170 47.1
CSS0044280 Camellia sinensis var. sinensis HOM05D007537 ORTHO05D009602 4.9e-30 136.0 125 58.4
MD01G1154400 Malus domestica HOM05D007537 ORTHO05D009602 4.9e-30 136.0 128 56.2
Atru.chr12.52 Acer truncatum HOM05D007537 ORTHO05D009602 2.7e-28 130.2 298 32.6
ATR0681G199 Amborella trichopoda HOM05D007537 ORTHO05D009602 1.0e-22 111.7 314 30.6
Os01g0830500 Oryza sativa ssp. japonica HOM05D007537 ORTHO05D009602 1.3e-22 111.3 317 33.4
HPP92_007582 Vanilla planifolia HOM05D007537 ORTHO05D009602 1.3e-22 111.3 309 31.1
Glyma.14G058602 Glycine max HOM05D007537 ORTHO05D009602 6.9e-16 89.0 98 48.0
Oeu004692.1 Olea europaea HOM05D007537 ORTHO05D009602 4.5e-15 86.3 121 42.1
SEGI_01266 Sequoiadendron giganteum HOM05D007537 ORTHO05D009602 2.9e-14 83.6 319 28.5
SEGI_28444 Sequoiadendron giganteum HOM05D007537 ORTHO05D008256 1.3e-11 74.7 326 25.8
SEGI_29994 Sequoiadendron giganteum HOM05D007537 ORTHO05D008256 1.3e-11 74.7 326 25.8
Oeu004690.1 Olea europaea HOM05D007537 ORTHO05D009602 2.3e-11 73.9 126 42.1
SEGI_41305 Sequoiadendron giganteum HOM05D007537 ORTHO05D009602 1.5e-10 71.2 318 26.1
Lalb_Chr20g0108961 Lupinus albus HOM05D000858 ORTHO05D001578 6.3e-09 65.9 246 24.8
Lalb_Chr19g0133601 Lupinus albus HOM05D000858 ORTHO05D001578 3.1e-08 63.5 244 24.6
Lalb_Chr25g0285421 Lupinus albus HOM05D000858 ORTHO05D001578 1.2e-07 61.6 246 24.4
Thhalv10008120m.g Eutrema salsugineum HOM05D000858 ORTHO05D001578 7.7e-07 58.9 244 24.2
Actinidia12843 Actinidia chinensis HOM05D000858 ORTHO05D001578 1.7e-06 57.8 243 24.3
Aa31LG6G5630 Aethionema arabicum HOM05D000858 ORTHO05D001578 2.2e-06 57.4 210 23.8
Potri.011G095600 Populus trichocarpa HOM05D000858 ORTHO05D001578 2.2e-06 57.4 248 23.8
Sp1g25910 Schrenkiella parvula HOM05D000858 ORTHO05D001578 2.2e-06 57.4 244 23.0
BcaB03g13846 Brassica carinata HOM05D000858 ORTHO05D001578 2.9e-06 57.0 213 23.9
BcaC06g35483 Brassica carinata HOM05D000858 ORTHO05D001578 3.8e-06 56.6 214 23.8
Aqoxy2G02290 Aquilegia oxysepala HOM05D000018 ORTHO05D000187 5.0e-06 56.2 243 24.7
Carub.0001s2827 Capsella rubella HOM05D000858 ORTHO05D001578 5.0e-06 56.2 244 23.4
THA.LOC104820648 Tarenaya hassleriana HOM05D000858 ORTHO05D001578 5.0e-06 56.2 267 24.3
C07p15570 Brassica napus HOM05D000858 ORTHO05D001578 8.5e-06 55.5 214 23.4
BolC7t42044H Brassica oleracea HOM05D000858 ORTHO05D001578 8.5e-06 55.5 214 23.4
Gorai.006G092800 Gossypium raimondii HOM05D000858 ORTHO05D001578 8.5e-06 55.5 235 24.3
Oeu020016.1 Olea europaea HOM05D000858 ORTHO05D001578 8.5e-06 55.5 248 25.0


User provided reference genes

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