Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Eucgr.J00178 Eucalyptus grandis HOM05D007663 ORTHO05D009455 2.7e-155 552.4 371 100.0
TWI73G0671 Tripterygium wilfordii HOM05D007663 ORTHO05D009455 1.6e-67 260.8 383 44.6
RcHm_v2.0_Chr1g0370871 Rosa chinensis HOM05D007663 ORTHO05D009455 5.2e-66 255.8 314 49.7
Lalb_Chr04g0250441 Lupinus albus HOM05D007663 ORTHO05D009455 4.4e-65 252.7 290 51.7
QL08p063638 Quercus lobata HOM05D007663 ORTHO05D009455 6.4e-64 248.8 385 43.1
arahy.Tifrunner.gnm1.ann1.QDW8X7 Arachis hypogaea HOM05D007663 ORTHO05D009455 1.0e-61 241.5 295 49.8
arahy.Tifrunner.gnm1.ann1.CJK2YY Arachis hypogaea HOM05D007663 ORTHO05D009455 1.3e-61 241.1 295 49.5
FvH4_7g24970 Fragaria vesca HOM05D007663 ORTHO05D009455 2.3e-61 240.4 295 48.8
Prupe.2G254900 Prunus persica HOM05D007663 ORTHO05D009455 3.0e-61 240.0 306 47.1
FAN01G2334 Fragaria x ananassa HOM05D007663 ORTHO05D009455 3.9e-61 239.6 307 47.2
CSS0001014 Camellia sinensis var. sinensis HOM05D007663 ORTHO05D009455 5.1e-61 239.2 390 41.3
CSS0017188 Camellia sinensis var. sinensis HOM05D007663 ORTHO05D009455 5.1e-61 239.2 390 41.3
FAN06G1368 Fragaria x ananassa HOM05D007663 ORTHO05D009455 1.9e-60 237.3 295 48.1
FAN03G1333 Fragaria x ananassa HOM05D007663 ORTHO05D009455 9.6e-60 235.0 291 48.1
PGR044G1292 Punica granatum HOM05D007663 ORTHO05D009455 4.8e-59 232.6 275 52.4
MD01G1157100 Malus domestica HOM05D007663 ORTHO05D009455 6.2e-59 232.3 326 44.2
TAR633G2105 Trochodendron aralioides HOM05D007663 ORTHO05D009455 8.1e-59 231.9 392 40.6
VMungo0647G1650 Vigna mungo HOM05D007663 ORTHO05D009455 4.0e-58 229.6 292 49.3
Ca_05987_v3 Cicer arietinum L. HOM05D007663 ORTHO05D009455 5.3e-58 229.2 292 48.3
Manes.11G152176 Manihot esculenta HOM05D007663 ORTHO05D009455 1.2e-57 228.0 390 40.5
Dinv21764 Davidia involucrata HOM05D007663 ORTHO05D009455 2.0e-57 227.3 387 41.6
LjContig00357g0015684 Lotus japonicus HOM05D007663 ORTHO05D009455 2.0e-57 227.3 294 48.0
Manes.11G152127 Manihot esculenta HOM05D007663 ORTHO05D009455 5.8e-57 225.7 389 40.9
Medtr8g056020 Medicago truncatula HOM05D007663 ORTHO05D009455 9.9e-57 224.9 292 46.2
Psat2g031520 Pisum sativum HOM05D007663 ORTHO05D009455 1.1e-55 221.5 291 46.7
Duzib128G1882 Durio zibethinus HOM05D007663 ORTHO05D009455 1.4e-55 221.1 395 38.7
Glyma.02G263600 Glycine max HOM05D007663 ORTHO05D009455 3.2e-55 219.9 282 47.5
Nn2g10961 Nelumbo nucifera HOM05D007663 ORTHO05D009455 9.3e-55 218.4 388 39.9
Phvul.008G221600 Phaseolus vulgaris HOM05D007663 ORTHO05D009455 1.2e-54 218.0 285 49.1
GSVIVG01032765001 Vitis vinifera HOM05D007663 ORTHO05D009455 2.1e-54 217.2 309 46.0
vmacro17693 Vaccinium macrocarpon HOM05D007663 ORTHO05D009455 6.0e-54 215.7 385 42.1
SGA_v2.0_scaffold44G16663 Striga asiatica HOM05D007663 ORTHO05D009455 7.9e-54 215.3 317 44.8
Ciclev10031427m.g Citrus clementina HOM05D007663 ORTHO05D009455 1.0e-53 214.9 380 40.0
COL.COLO4_25779 Corchorus olitorius HOM05D007663 ORTHO05D009455 1.0e-53 214.9 394 37.6
DCAR_010462 Daucus carota HOM05D007663 ORTHO05D009455 1.3e-53 214.5 376 40.4
HanXRQChr14g0459391 Helianthus annuus HOM05D007663 ORTHO05D009455 3.9e-53 213.0 384 38.3
Lsat_1_v5_gn_2_124440 Lactuca sativa HOM05D007663 ORTHO05D009455 5.1e-53 212.6 382 38.7
Rhsim03G0146000 Rhododendron simsii HOM05D007663 ORTHO05D009455 6.7e-53 212.2 386 41.7
Manes.07G134100 Manihot esculenta HOM05D007663 ORTHO05D009455 5.6e-52 209.1 293 45.4
CAN.G156.14 Capsicum annuum HOM05D007663 ORTHO05D009455 2.1e-51 207.2 387 39.0
SalBow3G1672 Salvia bowleyana HOM05D007663 ORTHO05D009455 2.8e-51 206.8 370 41.4
Manes.11G152184 Manihot esculenta HOM05D007663 ORTHO05D009455 3.6e-51 206.5 293 45.4
Solyc03g095860.3 Solanum lycopersicum HOM05D007663 ORTHO05D009455 4.8e-51 206.1 389 38.8
MBI15_g12399_MAGBIO Magnolia biondii HOM05D007663 ORTHO05D009455 6.2e-51 205.7 292 43.8
PGSC0003DMG400027722 Solanum tuberosum HOM05D007663 ORTHO05D009455 6.2e-51 205.7 388 38.9
Cfa001285 Carpinus fangiana HOM05D000718 ORTHO05D006723 1.1e-50 204.9 372 39.2
Nitab4.5_0001222g0010 Nicotiana tabacum HOM05D007663 ORTHO05D009455 1.1e-50 204.9 374 38.8
Sopen03g025840 Solanum pennellii HOM05D007663 ORTHO05D009455 1.1e-50 204.9 389 38.6
Sabra10G0142400 Salix brachista HOM05D007663 ORTHO05D009455 1.8e-50 204.1 376 38.3
Nitab4.5_0000409g0130 Nicotiana tabacum HOM05D007663 ORTHO05D009455 2.4e-50 203.8 374 39.0
Haze_17265 Corylus avellana HOM05D007663 ORTHO05D009455 5.3e-50 202.6 383 40.5
Potri.010G185200 Populus trichocarpa HOM05D007663 ORTHO05D009455 9.0e-50 201.8 377 38.5
Actinidia33912 Actinidia chinensis HOM05D007663 ORTHO05D009455 1.2e-49 201.4 291 44.3
Thecc.10G011700 Theobroma cacao HOM05D007663 ORTHO05D009455 1.2e-49 201.4 293 46.1
Cpa.g.sc65.132 Carica papaya HOM05D007663 ORTHO05D009455 2.6e-49 200.3 393 37.2
Aqoxy2G00815 Aquilegia oxysepala HOM05D007663 ORTHO05D009455 4.5e-49 199.5 387 37.0
CANSAT56G3657 Cannabis sativa HOM05D007663 ORTHO05D009455 4.5e-49 199.5 297 42.4
TPR.G38411 Trifolium pratense HOM05D007663 ORTHO05D009455 4.5e-49 199.5 297 44.1
CiPaw.01G301100 Carya illinoinensis HOM05D007663 ORTHO05D009455 9.9e-49 198.4 371 39.1
Cc02_g05740 Coffea canephora HOM05D007663 ORTHO05D009455 9.9e-49 198.4 375 40.0
Lj8A63T91 Lonicera japonica HOM05D007663 ORTHO05D009455 3.8e-48 196.4 374 36.9
ECA238G2021 Erigeron canadensis HOM05D007663 ORTHO05D009455 4.9e-48 196.1 386 37.8
Migut.F00643 Erythranthe guttata HOM05D007663 ORTHO05D009455 6.4e-48 195.7 378 38.6
Manes.11G152141 Manihot esculenta HOM05D007663 ORTHO05D009455 1.4e-47 194.5 381 38.1
Manes.11G152105 Manihot esculenta HOM05D007663 ORTHO05D009455 5.5e-47 192.6 275 45.5
Peaxi162Scf00304g00013 Petunia axillaris HOM05D007663 ORTHO05D009455 1.2e-46 191.4 297 44.8
Atru.chr12.76 Acer truncatum HOM05D007663 ORTHO05D009455 1.6e-46 191.0 286 45.8
Manes.05G009249 Manihot esculenta HOM05D007663 ORTHO05D009455 1.6e-46 191.0 178 59.0
MSTRG.27307 Avicennia marina HOM05D007663 ORTHO05D009455 2.1e-46 190.7 374 37.2
vmacro06952 Vaccinium macrocarpon HOM05D007663 ORTHO05D009455 3.0e-45 186.8 188 58.5
Manes.07G064566 Manihot esculenta HOM05D000718 ORTHO05D009455 7.4e-44 182.2 256 46.1
Gorai.012G078700 Gossypium raimondii HOM05D007663 ORTHO05D009455 8.1e-43 178.7 391 34.0
Gohir.D04G070200 Gossypium hirsutum HOM05D007663 ORTHO05D009455 1.2e-41 174.9 394 33.2
Manes.07G064632 Manihot esculenta HOM05D007663 ORTHO05D009455 3.4e-41 173.3 355 38.0
Zm00001eb368510 Zea mays HOM05D007663 ORTHO05D009455 4.5e-41 172.9 316 42.1
Gohir.A05G331600 Gossypium hirsutum HOM05D007663 ORTHO05D009455 3.8e-40 169.9 391 34.3
Os01g0829100 Oryza sativa ssp. japonica HOM05D007663 ORTHO05D009455 1.6e-38 164.5 302 38.7
Manes.07G133005 Manihot esculenta HOM05D007663 ORTHO05D009455 1.8e-37 161.0 138 60.9
Actinidia29715 Actinidia chinensis HOM05D007663 ORTHO05D009455 7.4e-36 155.6 162 53.7
Atru.chr12.71 Acer truncatum HOM05D007663 ORTHO05D009455 5.9e-33 146.0 186 48.9
Manes.11G152042 Manihot esculenta HOM05D007663 ORTHO05D009455 5.0e-32 142.9 192 47.9
FAN10G3031 Fragaria x ananassa HOM05D007663 ORTHO05D009455 1.9e-28 131.0 282 33.7
SEGI_12817 Sequoiadendron giganteum HOM05D007663 ORTHO05D009455 3.3e-28 130.2 196 45.4
Mapoly0012s0013 Marchantia polymorpha HOM05D006239 ORTHO05D009455 2.6e-25 120.6 192 41.7
Manes.11G152170 Manihot esculenta HOM05D007663 ORTHO05D009455 2.1e-22 110.9 285 33.0
COL.COLO4_32758 Corchorus olitorius HOM05D007663 ORTHO05D009455 2.6e-17 94.0 86 58.1
SEGI_03126 Sequoiadendron giganteum HOM05D006239 ORTHO05D009388 4.7e-14 83.2 189 33.9
Pp3c10_23790 Physcomitrium patens HOM05D006239 ORTHO05D009455 3.9e-13 80.1 152 34.2
Mapoly0060s0009 Marchantia polymorpha HOM05D006239 ORTHO05D008159 2.6e-12 77.4 185 29.2
AagrBONN_evm.TU.Sc2ySwM_117.3902 Anthoceros agrestis HOM05D006239 ORTHO05D008159 1.8e-10 71.2 188 30.3
AagrBONN_evm.TU.Sc2ySwM_362.193 Anthoceros agrestis HOM05D006239 ORTHO05D008159 5.3e-10 69.7 195 32.3
Atru.chr2.1466 Acer truncatum HOM05D006239 ORTHO05D008159 9.1e-10 68.9 208 31.2
MBI05_g30081_MAGBIO Magnolia biondii HOM05D006239 ORTHO05D008159 1.7e-08 64.7 186 29.0
Nitab4.5_0002087g0020 Nicotiana tabacum HOM05D006239 ORTHO05D008159 2.9e-08 63.9 212 28.8
CAN.G128.146 Capsicum annuum HOM05D006239 ORTHO05D008159 3.8e-08 63.5 223 27.8
Mapoly0059s0032 Marchantia polymorpha HOM05D006239 ORTHO05D009455 8.5e-08 62.4 102 33.3
Ciclev10019618m.g Citrus clementina HOM05D006239 ORTHO05D008159 1.1e-07 62.0 220 30.9
Gohir.D13G167300 Gossypium hirsutum HOM05D006239 ORTHO05D008159 1.1e-07 62.0 218 28.4
Nitab4.5_0000387g0060 Nicotiana tabacum HOM05D006239 ORTHO05D008159 1.1e-07 62.0 204 28.9
TPR.G16955 Trifolium pratense HOM05D007464 ORTHO05D009388 1.1e-07 62.0 323 25.7
Solyc10g081500.1 Solanum lycopersicum HOM05D006239 ORTHO05D008159 1.9e-07 61.2 220 26.8
Sopen10g032010 Solanum pennellii HOM05D006239 ORTHO05D008159 1.9e-07 61.2 223 27.4
Gohir.A13G164500 Gossypium hirsutum HOM05D006239 ORTHO05D008159 3.2e-07 60.5 218 28.9
Lsat_1_v5_gn_6_31780 Lactuca sativa HOM05D006239 ORTHO05D008159 3.2e-07 60.5 204 27.0
Peaxi162Scf00575g00001 Petunia axillaris HOM05D006239 ORTHO05D008159 3.2e-07 60.5 220 27.3
PGSC0003DMG400028126 Solanum tuberosum HOM05D006239 ORTHO05D008159 3.2e-07 60.5 223 27.4
Gorai.013G195100 Gossypium raimondii HOM05D006239 ORTHO05D008159 4.2e-07 60.1 218 28.9
Lalb_Chr02g0157291 Lupinus albus HOM05D006239 ORTHO05D008159 7.2e-07 59.3 195 29.7
MELO3C009784.2 Cucumis melo HOM05D006239 ORTHO05D008159 9.4e-07 58.9 176 31.2
Duzib177G0431 Durio zibethinus HOM05D006239 ORTHO05D008159 1.2e-06 58.5 200 29.5
ClCG10G015950 Citrullus lanatus HOM05D006239 ORTHO05D008159 2.7e-06 57.4 196 30.1
DCAR_005579 Daucus carota HOM05D000584 ORTHO05D000458 3.6e-06 57.0 125 29.6
SGA_v2.0_scaffold399G50792 Striga asiatica HOM05D000584 ORTHO05D000458 3.6e-06 57.0 132 28.8
VMungo1383G2301 Vigna mungo HOM05D006239 ORTHO05D008159 3.6e-06 57.0 203 27.6
Thecc.05G244600 Theobroma cacao HOM05D006239 ORTHO05D008159 4.7e-06 56.6 200 29.0
Prupe.2G138100 Prunus persica HOM05D000584 ORTHO05D000458 6.1e-06 56.2 128 26.6
SalBow6G6363 Salvia bowleyana HOM05D000584 ORTHO05D000458 6.1e-06 56.2 125 28.0


User provided reference genes

Program Settings