Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Eucgr.I02752 Eucalyptus grandis HOM05D007992 ORTHO05D010086 1.4e-33 145.6 68 100.0
QL02p099856 Quercus lobata HOM05D007992 ORTHO05D010086 1.5e-27 125.6 65 87.7
QL93p0310_0002 Quercus lobata HOM05D007992 ORTHO05D010086 1.5e-27 125.6 65 87.7
CiPaw.05G051500 Carya illinoinensis HOM05D007992 ORTHO05D010086 2.0e-27 125.2 63 88.9
PGR142G0328 Punica granatum HOM05D007992 ORTHO05D010086 3.7e-26 120.9 63 84.1
Potri.003G009800 Populus trichocarpa HOM05D007992 ORTHO05D010086 4.1e-25 117.5 63 84.1
Sed0016814 Sechium edule HOM05D007992 ORTHO05D010086 4.1e-25 117.5 66 77.3
Manes.10G120300 Manihot esculenta HOM05D007992 ORTHO05D010086 5.3e-25 117.1 63 82.5
arahy.Tifrunner.gnm1.ann1.5LAZ71 Arachis hypogaea HOM05D007992 ORTHO05D010086 9.1e-25 116.3 63 79.4
arahy.Tifrunner.gnm1.ann1.UKT1PL Arachis hypogaea HOM05D007992 ORTHO05D010086 9.1e-25 116.3 63 79.4
Oeu045939.1 Olea europaea HOM05D007992 ORTHO05D010086 1.6e-24 115.5 60 85.0
Glyma.17G000900 Glycine max HOM05D007992 ORTHO05D010086 3.5e-24 114.4 65 78.5
TWI59G0747 Tripterygium wilfordii HOM05D007992 ORTHO05D010086 4.5e-24 114.0 63 82.5
Lj4g0012187 Lotus japonicus HOM05D007992 ORTHO05D010086 5.9e-24 113.6 63 79.4
MELO3C031671.2 Cucumis melo HOM05D007992 ORTHO05D010086 7.7e-24 113.2 69 76.8
Phvul.003G074700 Phaseolus vulgaris HOM05D007992 ORTHO05D010086 7.7e-24 113.2 63 79.4
GSVIVG01023280001 Vitis vinifera HOM05D007992 ORTHO05D010086 7.7e-24 113.2 63 81.0
Migut.B00791 Erythranthe guttata HOM05D007992 ORTHO05D010086 1.0e-23 112.8 60 80.0
CsaV3_3G019300 Cucumis sativus L. HOM05D007992 ORTHO05D010086 1.3e-23 112.5 69 75.4
THA.LOC104820254 Tarenaya hassleriana HOM05D007992 ORTHO05D010086 1.7e-23 112.1 63 77.8
CAN.G798.45 Capsicum annuum HOM05D007992 ORTHO05D010086 2.2e-23 111.7 63 77.8
Nitab4.5_0000948g0130 Nicotiana tabacum HOM05D007992 ORTHO05D010086 2.9e-23 111.3 63 77.8
MD15G1432800 Malus domestica HOM05D007992 ORTHO05D010086 3.8e-23 110.9 61 80.3
Cc02_g22280 Coffea canephora HOM05D007992 ORTHO05D010086 5.0e-23 110.5 60 80.0
Peaxi162Scf00011g00937 Petunia axillaris HOM05D007992 ORTHO05D010086 6.5e-23 110.2 63 76.2
Nitab4.5_0002596g0010 Nicotiana tabacum HOM05D007992 ORTHO05D010086 8.5e-23 109.8 63 76.2
CSS0028556 Camellia sinensis var. sinensis HOM05D007992 ORTHO05D010086 3.2e-22 107.8 63 79.4
HanXRQChr07g0187511 Helianthus annuus HOM05D007992 ORTHO05D010086 3.2e-22 107.8 60 76.7
Medtr4g134900 Medicago truncatula HOM05D007992 ORTHO05D010086 3.2e-22 107.8 63 74.6
Lsat_1_v5_gn_7_79260 Lactuca sativa HOM05D007992 ORTHO05D010086 5.5e-22 107.1 60 78.3
AT1G09794 Arabidopsis thaliana HOM05D007992 ORTHO05D010086 1.2e-21 105.9 63 74.6
Carub.0001s0914 Capsella rubella HOM05D007992 ORTHO05D010086 1.2e-21 105.9 63 74.6
CARHR009770 Cardamine hirsuta HOM05D007992 ORTHO05D010086 1.2e-21 105.9 63 74.6
Zm00001eb138500 Zea mays HOM05D007992 ORTHO05D010086 1.2e-21 105.9 63 76.2
Thhalv10009288m.g Eutrema salsugineum HOM05D007992 ORTHO05D010086 1.6e-21 105.5 63 74.6
Aa31LG1G5180 Aethionema arabicum HOM05D007992 ORTHO05D010086 3.6e-21 104.4 63 74.6
PSO782G2589 Papaver somniferum HOM05D007992 ORTHO05D010086 8.0e-21 103.2 58 81.0
RcHm_v2.0_Chr7g0220841 Rosa chinensis HOM05D007992 ORTHO05D010086 1.0e-20 102.8 57 78.9
C05p07870 Brassica napus HOM05D007992 ORTHO05D010086 1.4e-20 102.4 63 73.0
BolC5t29538H Brassica oleracea HOM05D007992 ORTHO05D010086 1.4e-20 102.4 63 73.0
Prupe.1G576700 Prunus persica HOM05D007992 ORTHO05D010086 1.4e-20 102.4 61 77.0
SalBow7G0224 Salvia bowleyana HOM05D007992 ORTHO05D010086 1.4e-20 102.4 68 67.6
DCAR_025353 Daucus carota HOM05D007992 ORTHO05D010086 1.8e-20 102.1 61 75.4
Os12g0182600 Oryza sativa ssp. japonica HOM05D007992 ORTHO05D010086 2.3e-20 101.7 63 73.0
A06p06460 Brassica napus HOM05D007992 ORTHO05D010086 3.0e-20 101.3 63 71.4
BraA06t23857Z Brassica rapa HOM05D007992 ORTHO05D010086 3.0e-20 101.3 63 71.4
AUR62023424 Chenopodium quinoa HOM05D007992 ORTHO05D010086 3.0e-20 101.3 60 73.3
Nn5g27747 Nelumbo nucifera HOM05D007992 ORTHO05D010086 1.5e-19 99.0 60 78.3
EL10Ac1g00780 Beta vulgaris HOM05D007992 ORTHO05D010086 2.6e-19 98.2 60 71.7
FAN04G0058 Fragaria x ananassa HOM05D007992 ORTHO05D010086 2.6e-19 98.2 57 75.4
vmacro01727 Vaccinium macrocarpon HOM05D007992 ORTHO05D010086 2.6e-19 98.2 73 64.4
FAN18G3190 Fragaria x ananassa HOM05D007992 ORTHO05D010086 3.4e-19 97.8 57 75.4
CANSAT54G2040 Cannabis sativa HOM05D007992 ORTHO05D010086 7.5e-19 96.7 61 70.5
AagrBONN_evm.TU.Sc2ySwM_228.5013 Anthoceros agrestis HOM05D007992 ORTHO05D010086 7.0e-17 90.1 62 67.7
Aqoxy6G00119 Aquilegia oxysepala HOM05D007992 ORTHO05D010086 1.3e-15 85.9 61 68.9
Pp3c6_8240 Physcomitrium patens HOM05D007992 ORTHO05D010086 6.5e-15 83.6 58 63.8
MD08G1240200 Malus domestica HOM05D007992 ORTHO05D010086 1.9e-14 82.0 59 66.1
Actinidia26161 Actinidia chinensis HOM05D000243 ORTHO05D010086 2.5e-14 81.6 44 79.5
Lalb_Chr13g0304491 Lupinus albus HOM05D007992 ORTHO05D010086 2.5e-14 81.6 62 62.9
Sp1g08390 Schrenkiella parvula HOM05D007992 ORTHO05D010086 7.2e-14 80.1 63 61.9
CBR_g44919 Chara braunii HOM05D007992 ORTHO05D010086 1.6e-13 79.0 56 60.7
SMO367G0246 Selaginella moellendorffii HOM05D007992 ORTHO05D010086 5.2e-12 73.9 61 47.5
MBI09_g08443_MAGBIO Magnolia biondii HOM05D007992 ORTHO05D010086 1.2e-11 72.8 67 55.2
Atru.chr6.758 Acer truncatum HOM05D007992 ORTHO05D010086 7.5e-11 70.1 63 55.6
Duzib132G0994 Durio zibethinus HOM05D007992 ORTHO05D010086 1.3e-10 69.3 35 82.9
Gohir.D04G175400 Gossypium hirsutum HOM05D007992 ORTHO05D010086 1.7e-10 68.9 63 54.0
Gorai.012G166700 Gossypium raimondii HOM05D007992 ORTHO05D010086 1.7e-10 68.9 63 54.0
Thecc.02G025300 Theobroma cacao HOM05D007992 ORTHO05D010086 2.2e-10 68.6 63 54.0
Gohir.A04G130200 Gossypium hirsutum HOM05D007992 ORTHO05D010086 8.3e-10 66.6 35 77.1
Sabra03G0005100 Salix brachista HOM05D007992 ORTHO05D010086 2.4e-09 65.1 35 80.0
CDE02G3423 Ceratophyllum demersum HOM05D007992 ORTHO05D010086 3.1e-09 64.7 64 51.6
unitig_26.g9026 Utricularia gibba HOM05D007992 ORTHO05D010086 1.2e-08 62.8 43 65.1
TPR.G17560 Trifolium pratense HOM05D007992 ORTHO05D010086 4.5e-08 60.8 29 89.7
SGA_v2.0_scaffold272G46362 Striga asiatica HOM05D007992 ORTHO05D010086 1.0e-07 59.7 29 86.2
PGSC0003DMG400024927 Solanum tuberosum HOM05D007992 ORTHO05D010086 2.3e-07 58.5 29 82.8
Migut.B00795 Erythranthe guttata HOM05D007992 ORTHO05D010086 2.9e-07 58.2 29 79.3
TPR.G6015 Trifolium pratense HOM05D005420 ORTHO05D006524 2.9e-07 58.2 57 47.4
Rhsim11G0125500 Rhododendron simsii HOM05D007992 ORTHO05D010086 1.9e-06 55.5 32 75.0


User provided reference genes

Program Settings