Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Eucgr.I02683 Eucalyptus grandis HOM05D001981 ORTHO05D000470 9.8e-49 196.4 96 100.0
Eucgr.I02680 Eucalyptus grandis HOM05D001981 ORTHO05D000470 8.0e-35 150.2 100 76.0
Ca_18338_v3 Cicer arietinum L. HOM05D001981 ORTHO05D000470 5.4e-15 84.3 93 49.5
VMungo0540G0854 Vigna mungo HOM05D001981 ORTHO05D000470 7.1e-15 84.0 91 51.6
Phvul.006G207700 Phaseolus vulgaris HOM05D001981 ORTHO05D000470 7.8e-14 80.5 91 49.5
Phvul.006G207600 Phaseolus vulgaris HOM05D001981 ORTHO05D000470 5.1e-13 77.8 95 48.4
Lj4g0002042 Lotus japonicus HOM05D001981 ORTHO05D000470 1.5e-12 76.3 93 44.1
Psat7g098120 Pisum sativum HOM05D001981 ORTHO05D000470 1.9e-12 75.9 95 45.3
Glyma.08G180100 Glycine max HOM05D001981 ORTHO05D000470 1.6e-11 72.8 91 48.4
VMungo0540G0764 Vigna mungo HOM05D001981 ORTHO05D000470 1.6e-11 72.8 95 44.2
RcHm_v2.0_Chr7g0226211 Rosa chinensis HOM05D001981 ORTHO05D000470 2.1e-11 72.4 86 45.3
Glyma.08G180300 Glycine max HOM05D001981 ORTHO05D000470 6.2e-11 70.9 91 48.4
Medtr4g094275 Medicago truncatula HOM05D001981 ORTHO05D000470 6.2e-11 70.9 91 41.8
Prupe.1G558200 Prunus persica HOM05D001981 ORTHO05D000470 4.0e-10 68.2 91 42.9
Lj6g0001735 Lotus japonicus HOM05D001981 ORTHO05D000470 8.9e-10 67.0 97 41.2
Lalb_Chr10g0097691 Lupinus albus HOM05D001981 ORTHO05D000470 8.9e-10 67.0 93 41.9
Manes.14G167400 Manihot esculenta HOM05D001981 ORTHO05D000470 1.5e-09 66.2 94 40.4
QL11p019790 Quercus lobata HOM05D001981 ORTHO05D000470 2.0e-09 65.9 94 44.7
Haze_10638 Corylus avellana HOM05D001981 ORTHO05D000470 2.6e-09 65.5 93 44.1
PSO541G5336 Papaver somniferum HOM05D001981 ORTHO05D000470 3.4e-09 65.1 80 42.5
Lj4g0025524 Lotus japonicus HOM05D001981 ORTHO05D000470 4.4e-09 64.7 95 41.1
Thecc.02G142200 Theobroma cacao HOM05D001981 ORTHO05D000470 5.8e-09 64.3 90 44.4
TPR.G10434 Trifolium pratense HOM05D001981 ORTHO05D000470 5.8e-09 64.3 94 40.4
Lalb_Chr20g0123101 Lupinus albus HOM05D001981 ORTHO05D000470 9.9e-09 63.5 91 39.6
Glyma.05G119200 Glycine max HOM05D001981 ORTHO05D000470 1.7e-08 62.8 101 39.6
COL.COLO4_33867 Corchorus olitorius HOM05D001981 ORTHO05D000470 2.9e-08 62.0 91 42.9
TAR381G0738 Trochodendron aralioides HOM05D001981 ORTHO05D000470 2.9e-08 62.0 90 38.9
arahy.Tifrunner.gnm1.ann1.GBJ2WV Arachis hypogaea HOM05D001981 ORTHO05D000470 6.4e-08 60.8 91 39.6
MBI05_g00782_MAGBIO Magnolia biondii HOM05D001981 ORTHO05D000470 6.4e-08 60.8 93 37.6
Psat1g217600 Pisum sativum HOM05D001981 ORTHO05D000470 1.4e-07 59.7 91 39.6
ECA234G3825 Erigeron canadensis HOM05D001981 ORTHO05D000470 1.9e-07 59.3 86 41.9
Glyma.08G074200 Glycine max HOM05D001981 ORTHO05D000470 4.2e-07 58.2 104 40.4
MD08G1221200 Malus domestica HOM05D001981 ORTHO05D000470 1.6e-06 56.2 83 41.0
VMungo0251G3341 Vigna mungo HOM05D001981 ORTHO05D000470 2.7e-06 55.5 103 35.9
Psat7g074760 Pisum sativum HOM05D001981 ORTHO05D000470 3.5e-06 55.1 90 34.4
MELO3C020425.2 Cucumis melo HOM05D001981 ORTHO05D000470 4.6e-06 54.7 87 40.2
Phvul.002G207300 Phaseolus vulgaris HOM05D001981 ORTHO05D000470 4.6e-06 54.7 101 34.7
HPP92_024555 Vanilla planifolia HOM05D001981 ORTHO05D000470 4.6e-06 54.7 92 37.0
PGSC0003DMG400021836 Solanum tuberosum HOM05D001981 ORTHO05D000470 6.0e-06 54.3 75 40.0
HanXRQChr16g0514091 Helianthus annuus HOM05D001981 ORTHO05D000470 7.8e-06 53.9 87 40.2


User provided reference genes

Program Settings