Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Eucgr.I02668 Eucalyptus grandis HOM05D005104 ORTHO05D006614 3.3e-130 468.4 238 100.0
PGR142G2776 Punica granatum HOM05D005104 ORTHO05D006614 7.5e-82 307.8 241 69.7
Phvul.002G208000 Phaseolus vulgaris HOM05D005104 ORTHO05D006614 2.7e-79 299.3 248 66.5
Duzib248G0158 Durio zibethinus HOM05D005104 ORTHO05D006614 7.7e-79 297.7 247 66.0
Dinv24198 Davidia involucrata HOM05D005104 ORTHO05D006614 1.7e-78 296.6 252 66.7
arahy.Tifrunner.gnm1.ann1.V9NXIE Arachis hypogaea HOM05D005104 ORTHO05D006614 8.5e-78 294.3 250 65.6
Manes.14G166400 Manihot esculenta HOM05D005104 ORTHO05D006614 2.5e-77 292.7 245 66.1
Psat7g098720 Pisum sativum HOM05D005104 ORTHO05D006614 4.7e-76 288.5 245 64.5
VMungo0251G0802 Vigna mungo HOM05D005104 ORTHO05D006614 4.7e-76 288.5 248 65.3
CANSAT11G2657 Cannabis sativa HOM05D005104 ORTHO05D006614 1.4e-75 287.0 263 60.8
arahy.Tifrunner.gnm1.ann1.PH7E5N Arachis hypogaea HOM05D005104 ORTHO05D006614 2.3e-75 286.2 250 63.2
Gohir.A04G113100 Gossypium hirsutum HOM05D005104 ORTHO05D006614 5.2e-75 285.0 251 64.1
Medtr4g094252 Medicago truncatula HOM05D005104 ORTHO05D006614 8.8e-75 284.3 246 62.2
Glyma.05G118400 Glycine max HOM05D005104 ORTHO05D006614 1.5e-74 283.5 245 64.1
Lj4g0020611 Lotus japonicus HOM05D005104 ORTHO05D006614 1.5e-74 283.5 244 63.9
Thecc.02G140100 Theobroma cacao HOM05D005104 ORTHO05D006614 1.5e-74 283.5 249 63.1
TAR628G1132 Trochodendron aralioides HOM05D005104 ORTHO05D006614 1.5e-74 283.5 249 65.9
COL.COLO4_20953 Corchorus olitorius HOM05D005104 ORTHO05D006614 2.6e-74 282.7 249 63.1
CiPaw.05G036500 Carya illinoinensis HOM05D005104 ORTHO05D006614 3.4e-74 282.3 249 62.7
Haze_10684 Corylus avellana HOM05D005104 ORTHO05D006614 2.2e-73 279.6 244 63.5
Glyma.08G073500 Glycine max HOM05D005104 ORTHO05D006614 3.7e-73 278.9 250 64.4
Gohir.D04G154400 Gossypium hirsutum HOM05D005104 ORTHO05D006614 4.8e-73 278.5 249 63.5
Gorai.012G141700 Gossypium raimondii HOM05D005104 ORTHO05D006614 4.8e-73 278.5 249 63.5
GSVIVG01003083001 Vitis vinifera HOM05D005104 ORTHO05D006614 4.8e-73 278.5 252 65.1
Actinidia28058 Actinidia chinensis HOM05D005104 ORTHO05D006614 6.3e-73 278.1 251 62.5
MELO3C018651.2 Cucumis melo HOM05D005104 ORTHO05D006614 2.4e-72 276.2 248 61.3
Lalb_Chr10g0097741 Lupinus albus HOM05D005104 ORTHO05D006614 2.4e-72 276.2 249 61.0
CsaV3_7G006430 Cucumis sativus L. HOM05D005104 ORTHO05D006614 9.1e-72 274.2 253 60.1
Cfa005608 Carpinus fangiana HOM05D005104 ORTHO05D006614 4.5e-71 271.9 248 61.3
Ca_18345_v3 Cicer arietinum L. HOM05D005104 ORTHO05D006614 4.5e-71 271.9 265 58.5
TWI59G0245 Tripterygium wilfordii HOM05D005104 ORTHO05D006614 3.8e-70 268.9 241 62.7
Cpa.g.sc42.74 Carica papaya HOM05D005104 ORTHO05D006614 6.6e-70 268.1 255 59.6
ClCG09G015340 Citrullus lanatus HOM05D005104 ORTHO05D006614 8.6e-70 267.7 269 57.2
Gohir.A04G112960 Gossypium hirsutum HOM05D005104 ORTHO05D006614 8.6e-70 267.7 203 70.0
Sed0008592 Sechium edule HOM05D005104 ORTHO05D006614 1.5e-69 266.9 245 60.0
CSS0037720 Camellia sinensis var. sinensis HOM05D005104 ORTHO05D006614 2.5e-69 266.2 249 60.6
TPR.G10460 Trifolium pratense HOM05D005104 ORTHO05D006614 2.5e-69 266.2 194 70.1
SalBow6G6009 Salvia bowleyana HOM05D005104 ORTHO05D006614 3.3e-69 265.8 245 62.9
SalBow6G6298 Salvia bowleyana HOM05D005104 ORTHO05D006614 3.3e-69 265.8 245 62.9
Prupe.8G062400 Prunus persica HOM05D005104 ORTHO05D006614 4.2e-69 265.4 244 61.9
Atru.chr6.1109 Acer truncatum HOM05D005104 ORTHO05D006614 5.5e-69 265.0 239 61.5
MSTRG.27791 Avicennia marina HOM05D005104 ORTHO05D006614 1.2e-68 263.8 244 61.9
Atru.chr6.1089 Acer truncatum HOM05D005104 ORTHO05D006614 6.1e-68 261.5 240 61.2
MD10G1051500 Malus domestica HOM05D005104 ORTHO05D006614 1.8e-67 260.0 244 61.1
HanXRQChr10g0295831 Helianthus annuus HOM05D005104 ORTHO05D006614 2.0e-66 256.5 250 60.4
Nn1g05321 Nelumbo nucifera HOM05D005104 ORTHO05D006614 3.4e-66 255.8 247 58.7
Oeu007957.1 Olea europaea HOM05D005104 ORTHO05D006614 9.8e-66 254.2 247 59.9
Ciclev10029197m.g Citrus clementina HOM05D005104 ORTHO05D006614 1.3e-65 253.8 238 59.7
Migut.N01063 Erythranthe guttata HOM05D005104 ORTHO05D006614 1.7e-65 253.4 241 60.2
HPP92_006000 Vanilla planifolia HOM05D005104 ORTHO05D006614 1.7e-65 253.4 248 60.5
Hma1.2p1_0522F.1_g171600 Hydrangea macrophylla HOM05D005104 ORTHO05D006614 2.2e-65 253.1 204 67.2
Aqoxy6G00597 Aquilegia oxysepala HOM05D005104 ORTHO05D006614 3.7e-65 252.3 261 57.1
RcHm_v2.0_Chr6g0273461 Rosa chinensis HOM05D005104 ORTHO05D006614 3.7e-65 252.3 243 59.3
Sopen10g017460 Solanum pennellii HOM05D005104 ORTHO05D006614 6.3e-65 251.5 244 59.4
FAN27G3119 Fragaria x ananassa HOM05D005104 ORTHO05D006614 8.3e-65 251.1 239 60.3
SGA_v2.0_scaffold45G17311 Striga asiatica HOM05D005104 ORTHO05D006614 8.3e-65 251.1 252 58.7
FvH4_2g12710 Fragaria vesca HOM05D005104 ORTHO05D006614 4.1e-64 248.8 241 59.3
Thhalv10004872m.g Eutrema salsugineum HOM05D005104 ORTHO05D006614 1.2e-63 247.3 242 61.2
PGSC0003DMG400017693 Solanum tuberosum HOM05D005104 ORTHO05D006614 1.2e-63 247.3 245 58.8
QL11p020542 Quercus lobata HOM05D005104 ORTHO05D006614 1.6e-63 246.9 271 53.9
DCAR_001791 Daucus carota HOM05D005104 ORTHO05D006614 7.8e-63 244.6 251 57.4
AT5G64160 Arabidopsis thaliana HOM05D005104 ORTHO05D006614 2.3e-62 243.0 244 59.4
Sp2g27220 Schrenkiella parvula HOM05D005104 ORTHO05D006614 2.3e-62 243.0 243 59.3
Lsat_1_v5_gn_5_107140 Lactuca sativa HOM05D005104 ORTHO05D006614 6.6e-62 241.5 250 57.6
PSO781G0266 Papaver somniferum HOM05D005104 ORTHO05D006614 6.6e-62 241.5 256 58.6
AL8G41430 Arabidopsis lyrata HOM05D005104 ORTHO05D006614 1.5e-61 240.4 242 59.9
FAN20G1981 Fragaria x ananassa HOM05D005104 ORTHO05D006614 1.5e-61 240.4 239 57.7
Solyc10g047220.2 Solanum lycopersicum HOM05D005104 ORTHO05D006614 2.5e-61 239.6 244 57.8
vmacro19925 Vaccinium macrocarpon HOM05D005104 ORTHO05D006614 4.3e-61 238.8 291 53.3
BcaB07g29727 Brassica carinata HOM05D005104 ORTHO05D006614 1.6e-60 236.9 241 58.9
ATR0564G397 Amborella trichopoda HOM05D005104 ORTHO05D006614 2.1e-60 236.5 246 58.1
PSO541G4381 Papaver somniferum HOM05D005104 ORTHO05D006614 2.8e-60 236.1 257 57.2
Carub.0008s2495 Capsella rubella HOM05D005104 ORTHO05D006614 3.6e-60 235.7 242 58.3
CARHR278070 Cardamine hirsuta HOM05D005104 ORTHO05D006614 3.6e-60 235.7 242 59.1
Potri.003G023601 Populus trichocarpa HOM05D005104 ORTHO05D006614 6.1e-60 235.0 257 56.0
BcaB02g09781 Brassica carinata HOM05D005104 ORTHO05D006614 4.0e-59 232.3 239 56.9
A06p30880 Brassica napus HOM05D005104 ORTHO05D006614 6.8e-59 231.5 241 57.7
Aa31LG1G17770 Aethionema arabicum HOM05D005104 ORTHO05D006614 2.0e-58 229.9 259 56.4
ECA234G0341 Erigeron canadensis HOM05D005104 ORTHO05D006614 2.0e-58 229.9 198 63.6
BcaC01g02673 Brassica carinata HOM05D005104 ORTHO05D006614 3.4e-58 229.2 241 57.3
BolC3t18470H Brassica oleracea HOM05D005104 ORTHO05D006614 4.4e-58 228.8 241 56.8
CDE10G0587 Ceratophyllum demersum HOM05D005104 ORTHO05D006614 4.4e-58 228.8 247 53.8
C03p62090 Brassica napus HOM05D005104 ORTHO05D006614 5.8e-58 228.4 241 56.8
Rhsim05G0108500 Rhododendron simsii HOM05D005104 ORTHO05D006614 4.9e-57 225.3 182 65.4
SEGI_35517 Sequoiadendron giganteum HOM05D005104 ORTHO05D006614 3.2e-56 222.6 252 54.8
Cc02_g21630 Coffea canephora HOM05D005104 ORTHO05D006614 4.1e-56 222.2 239 57.7
BcaC02g09479 Brassica carinata HOM05D002012 ORTHO05D001992 7.0e-56 221.5 238 56.3
Hund06391 Selenicereus undatus HOM05D005104 ORTHO05D006614 7.0e-56 221.5 242 56.2
Peaxi162Scf00003g03543 Petunia axillaris HOM05D005104 ORTHO05D006614 2.0e-55 219.9 245 55.5
Sabra01G0157800 Salix brachista HOM05D005104 ORTHO05D006614 3.5e-55 219.2 278 50.7
Oeu026158.1 Olea europaea HOM05D005104 ORTHO05D006614 4.6e-55 218.8 246 54.5
C09p58340 Brassica napus HOM05D005104 ORTHO05D006614 1.3e-54 217.2 219 56.6
C09p58390 Brassica napus HOM05D005104 ORTHO05D006614 1.7e-54 216.9 231 55.0
BolC9t58698H Brassica oleracea HOM05D005104 ORTHO05D006614 2.3e-54 216.5 239 53.6
C06p26800 Brassica napus HOM05D005104 ORTHO05D006614 8.0e-52 208.0 228 53.9
C02p46090 Brassica napus HOM05D005104 ORTHO05D006614 3.1e-51 206.1 231 54.5
BolC6t37855H Brassica oleracea HOM05D005104 ORTHO05D006614 8.9e-51 204.5 228 53.1
BcaC08g45071 Brassica carinata HOM05D005104 ORTHO05D006614 1.2e-50 204.1 228 53.1
Hma1.2p1_0522F.1_g171590 Hydrangea macrophylla HOM05D005104 ORTHO05D006614 1.3e-49 200.7 207 57.5
Os02g0753200 Oryza sativa ssp. japonica HOM05D005104 ORTHO05D006614 1.7e-49 200.3 261 50.6
AUR62013112 Chenopodium quinoa HOM05D005104 ORTHO05D006614 2.2e-49 199.9 246 50.8
AUR62010117 Chenopodium quinoa HOM05D005104 ORTHO05D006614 2.9e-49 199.5 246 51.2
BraA03t13815Z Brassica rapa HOM05D005104 ORTHO05D006614 6.4e-49 198.4 229 52.4
GSVIVG01013334001 Vitis vinifera HOM05D005104 ORTHO05D006614 1.4e-48 197.2 139 74.8
GSVIVG01003087001 Vitis vinifera HOM05D005104 ORTHO05D006614 3.2e-48 196.1 139 74.1
FAN24G3378 Fragaria x ananassa HOM05D005104 ORTHO05D006614 7.0e-48 194.9 133 72.9
Lj5A240T40 Lonicera japonica HOM05D005104 ORTHO05D006614 2.1e-47 193.4 137 76.6
MBI02_g08741_MAGBIO Magnolia biondii HOM05D005104 ORTHO05D006614 2.7e-47 193.0 135 74.8
Ah.01g009520 Amaranthus hybridus HOM05D005104 ORTHO05D006614 1.0e-46 191.0 240 50.4
Zm00001eb255190 Zea mays HOM05D005104 ORTHO05D006614 1.4e-43 180.6 258 49.6
Zm00001eb194200 Zea mays HOM05D005104 ORTHO05D006614 8.9e-43 177.9 255 46.3
GSVIVG01003093001 Vitis vinifera HOM05D005104 ORTHO05D006614 5.4e-40 168.7 121 73.6
Nitab4.5_0000078g0030 Nicotiana tabacum HOM05D005104 ORTHO05D006614 9.2e-40 167.9 253 48.2
Pp3c18_21190 Physcomitrium patens HOM05D005104 ORTHO05D006614 3.5e-39 166.0 246 44.3
AagrBONN_evm.TU.Sc2ySwM_117.984 Anthoceros agrestis HOM05D005104 ORTHO05D006614 9.5e-37 157.9 243 45.7
Mapoly0096s0033 Marchantia polymorpha HOM05D005104 ORTHO05D006614 2.1e-36 156.8 262 44.3
SMO117G0229 Selaginella moellendorffii HOM05D005104 ORTHO05D006614 3.6e-36 156.0 194 52.1
Sc08g0003350 Simmondsia chinensis HOM05D005104 ORTHO05D006614 7.6e-34 148.3 134 61.2
unitig_22.g6836 Utricularia gibba HOM05D001058 ORTHO05D000911 1.9e-32 143.7 186 50.5
THA.LOC104818435 Tarenaya hassleriana HOM05D005104 ORTHO05D006614 2.3e-30 136.7 173 50.9
CAN.G1.36 Capsicum annuum HOM05D005104 ORTHO05D006614 3.9e-30 136.0 174 52.9
Nitab4.5_0005015g0050 Nicotiana tabacum HOM05D005104 ORTHO05D006614 2.0e-26 123.6 147 53.7
BolC4t25904H Brassica oleracea HOM05D005104 ORTHO05D006614 3.2e-24 116.3 73 78.1
EL10Ac9g21466 Beta vulgaris HOM05D005104 ORTHO05D006614 1.3e-22 110.9 74 73.0
CDE10G1356 Ceratophyllum demersum HOM05D005104 ORTHO05D006614 3.0e-22 109.8 176 41.5
Duzib132G1169 Durio zibethinus HOM05D005104 ORTHO05D006614 8.7e-22 108.2 137 50.4
CBR_g47116 Chara braunii HOM05D005104 ORTHO05D006614 1.9e-16 90.5 220 34.1
A02p26040 Brassica napus HOM05D005104 ORTHO05D006614 3.9e-14 82.8 99 52.5
Hma1.2p1_0516F.1_g170490 Hydrangea macrophylla HOM05D005104 ORTHO05D006614 3.9e-14 82.8 128 40.6
EL10Ac9g21465 Beta vulgaris HOM05D005104 ORTHO05D006614 3.7e-12 76.3 218 33.0
arahy.Tifrunner.gnm1.ann1.H2YG1F Arachis hypogaea HOM05D005104 ORTHO05D006614 2.4e-11 73.6 75 53.3
Potri.001G206032 Populus trichocarpa HOM05D005104 ORTHO05D006614 1.5e-10 70.9 186 36.0
BolC6t38485H Brassica oleracea HOM05D005104 ORTHO05D006614 1.4e-08 64.3 119 37.8
A10p06060 Brassica napus HOM05D005104 ORTHO05D006614 1.6e-07 60.8 82 47.6
C09p03790 Brassica napus HOM05D005104 ORTHO05D006614 1.6e-07 60.8 133 33.8
C07p45690 Brassica napus HOM05D005104 ORTHO05D021970 2.7e-07 60.1 150 33.3
C03p52730 Brassica napus HOM05D005104 ORTHO05D021970 1.3e-06 57.8 112 38.4
FAN15G2545 Fragaria x ananassa HOM05D005104 ORTHO05D006614 8.7e-06 55.1 115 39.1


User provided reference genes

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