Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Eucgr.I02667 Eucalyptus grandis HOM05D006161 ORTHO05D007483 2.7e-72 275.4 155 100.0
PGR142G0837 Punica granatum HOM05D006161 ORTHO05D007483 5.6e-62 241.1 150 90.0
GSVIVG01003100001 Vitis vinifera HOM05D006161 ORTHO05D007483 4.7e-61 238.0 152 87.5
RcHm_v2.0_Chr3g0485521 Rosa chinensis HOM05D006161 ORTHO05D007483 6.8e-60 234.2 147 87.8
Prupe.8G061800 Prunus persica HOM05D006161 ORTHO05D007483 2.0e-59 232.6 154 83.8
MD05G1163200 Malus domestica HOM05D006161 ORTHO05D007483 2.6e-59 232.3 151 84.8
arahy.Tifrunner.gnm1.ann1.6D7HHK Arachis hypogaea HOM05D006161 ORTHO05D007483 4.4e-59 231.5 152 86.2
arahy.Tifrunner.gnm1.ann1.75PVJ4 Arachis hypogaea HOM05D006161 ORTHO05D007483 4.4e-59 231.5 152 86.2
FAN26G2610 Fragaria x ananassa HOM05D006161 ORTHO05D007483 4.4e-59 231.5 155 83.2
FvH4_1g26050 Fragaria vesca HOM05D006161 ORTHO05D007483 7.5e-59 230.7 146 87.0
FAN28G0148 Fragaria x ananassa HOM05D006161 ORTHO05D007483 9.9e-59 230.3 155 82.6
MD10G1152800 Malus domestica HOM05D006161 ORTHO05D007483 1.3e-58 229.9 151 83.4
FAN23G0154 Fragaria x ananassa HOM05D006161 ORTHO05D007483 2.9e-58 228.8 155 81.9
FAN23G2587 Fragaria x ananassa HOM05D006161 ORTHO05D007483 2.9e-58 228.8 155 81.9
Manes.14G166201 Manihot esculenta HOM05D006161 ORTHO05D007483 2.9e-58 228.8 151 84.1
Rhsim05G0107700 Rhododendron simsii HOM05D006161 ORTHO05D007483 4.9e-58 228.0 153 83.0
Actinidia28057 Actinidia chinensis HOM05D004981 ORTHO05D007483 8.3e-58 227.3 153 82.4
FAN19G1889 Fragaria x ananassa HOM05D006161 ORTHO05D007483 1.1e-57 226.9 146 85.6
MD05G1163000 Malus domestica HOM05D006161 ORTHO05D007483 1.1e-57 226.9 151 83.4
Hund06386 Selenicereus undatus HOM05D006161 ORTHO05D007483 1.1e-57 226.9 146 86.3
CsaV3_7G006450 Cucumis sativus L. HOM05D006161 ORTHO05D007483 1.4e-57 226.5 147 81.6
Nitab4.5_0003858g0050 Nicotiana tabacum HOM05D006161 ORTHO05D007483 1.4e-57 226.5 153 81.7
Nitab4.5_0002576g0040 Nicotiana tabacum HOM05D006161 ORTHO05D007483 1.9e-57 226.1 153 81.7
Peaxi162Scf00001g00019 Petunia axillaris HOM05D006161 ORTHO05D007483 2.4e-57 225.7 155 81.3
MELO3C018647.2 Cucumis melo HOM05D006161 ORTHO05D007483 3.2e-57 225.3 147 81.6
Dinv09035 Davidia involucrata HOM05D006161 ORTHO05D007483 3.2e-57 225.3 153 82.4
Oeu047362.1 Olea europaea HOM05D006161 ORTHO05D007483 3.2e-57 225.3 151 82.1
PGSC0003DMG400012586 Solanum tuberosum HOM05D006161 ORTHO05D007483 5.4e-57 224.6 153 81.7
Sc18g0006920 Simmondsia chinensis HOM05D006161 ORTHO05D007483 2.7e-56 222.2 147 84.4
Solyc01g105130.4 Solanum lycopersicum HOM05D006161 ORTHO05D007483 2.7e-56 222.2 153 79.7
Sopen01g047660 Solanum pennellii HOM05D006161 ORTHO05D007483 2.7e-56 222.2 153 79.7
CAN.G523.74 Capsicum annuum HOM05D006161 ORTHO05D007483 3.5e-56 221.9 154 79.9
Ciclev10029442m.g Citrus clementina HOM05D006161 ORTHO05D007483 3.5e-56 221.9 155 82.6
Potri.012G022200 Populus trichocarpa HOM05D006161 ORTHO05D007483 4.6e-56 221.5 152 82.2
Sed0024565 Sechium edule HOM05D006161 ORTHO05D007483 4.6e-56 221.5 147 81.0
TWI14G1433 Tripterygium wilfordii HOM05D006161 ORTHO05D007483 4.6e-56 221.5 155 81.3
Atru.chr12.1730 Acer truncatum HOM05D006161 ORTHO05D007483 7.8e-56 220.7 155 81.3
EL10Ac9g21470 Beta vulgaris HOM05D006161 ORTHO05D007483 7.8e-56 220.7 145 84.8
vmacro19927 Vaccinium macrocarpon HOM05D006161 ORTHO05D007483 1.3e-55 219.9 149 81.9
Sabra15G0004000 Salix brachista HOM05D006161 ORTHO05D007483 2.3e-55 219.2 177 75.7
Lalb_Chr10g0097811 Lupinus albus HOM05D006161 ORTHO05D007483 3.0e-55 218.8 152 80.3
MD00G1096800 Malus domestica HOM05D006161 ORTHO05D007483 3.0e-55 218.8 152 82.2
Aqoxy3G03670 Aquilegia oxysepala HOM05D006161 ORTHO05D007483 3.9e-55 218.4 149 79.9
Psat7g098400 Pisum sativum HOM05D006161 ORTHO05D007483 1.9e-54 216.1 147 83.0
AUR62013116 Chenopodium quinoa HOM05D006161 ORTHO05D007483 2.5e-54 215.7 145 82.1
VMungo0251G3203 Vigna mungo HOM05D006161 ORTHO05D007483 5.6e-54 214.5 152 79.6
CSS0044873 Camellia sinensis var. sinensis HOM05D006161 ORTHO05D007483 1.2e-53 213.4 146 82.2
MSTRG.20298 Avicennia marina HOM05D006161 ORTHO05D007483 1.6e-53 213.0 150 78.7
Cfa005604 Carpinus fangiana HOM05D006161 ORTHO05D007483 2.1e-53 212.6 155 80.0
Medtr4g094242 Medicago truncatula HOM05D006161 ORTHO05D007483 2.1e-53 212.6 147 81.6
CANSAT11G1086 Cannabis sativa HOM05D006161 ORTHO05D007483 2.8e-53 212.2 150 79.3
Migut.B00613 Erythranthe guttata HOM05D006161 ORTHO05D007483 4.7e-53 211.5 154 77.9
SalBow6G1080 Salvia bowleyana HOM05D006161 ORTHO05D007483 6.2e-53 211.1 150 77.3
SalBow6G1732 Salvia bowleyana HOM05D006161 ORTHO05D007483 6.2e-53 211.1 150 77.3
THA.LOC104799966 Tarenaya hassleriana HOM05D006161 ORTHO05D007483 8.1e-53 210.7 148 79.1
Phvul.002G208400 Phaseolus vulgaris HOM05D006161 ORTHO05D007483 1.4e-52 209.9 152 77.6
Glyma.05G117900 Glycine max HOM05D006161 ORTHO05D007483 2.4e-52 209.1 152 77.6
Lsat_1_v5_gn_5_107281 Lactuca sativa HOM05D006161 ORTHO05D007483 3.1e-52 208.8 150 77.3
SGA_v2.0_scaffold14G07119 Striga asiatica HOM05D006161 ORTHO05D007483 3.1e-52 208.8 152 75.7
C03p62070 Brassica napus HOM05D006161 ORTHO05D007483 5.2e-52 208.0 159 74.8
Thhalv10005060m.g Eutrema salsugineum HOM05D006161 ORTHO05D007483 6.8e-52 207.6 148 78.4
Aa31LG1G17750 Aethionema arabicum HOM05D006161 ORTHO05D007483 1.2e-51 206.8 144 79.9
AL8G41450 Arabidopsis lyrata HOM05D006161 ORTHO05D007483 1.5e-51 206.5 146 78.1
MSTRG.16580 Avicennia marina HOM05D006161 ORTHO05D007483 1.5e-51 206.5 154 74.0
BolC3t18468H Brassica oleracea HOM05D006161 ORTHO05D007483 1.5e-51 206.5 159 74.8
Sp2g27240 Schrenkiella parvula HOM05D006161 ORTHO05D007483 1.5e-51 206.5 148 77.7
BcaB02g09779 Brassica carinata HOM05D006161 ORTHO05D007483 2.0e-51 206.1 148 77.7
AT5G64180 Arabidopsis thaliana HOM05D006161 ORTHO05D007483 2.6e-51 205.7 148 77.0
BraA09t36505Z Brassica rapa HOM05D006161 ORTHO05D007483 3.4e-51 205.3 148 77.0
A09p08560 Brassica napus HOM05D006161 ORTHO05D007483 4.4e-51 204.9 148 77.0
BolC9t53879H Brassica oleracea HOM05D006161 ORTHO05D007483 5.8e-51 204.5 148 77.0
CARHR278090 Cardamine hirsuta HOM05D006161 ORTHO05D007483 5.8e-51 204.5 146 76.0
Glyma.08G072800 Glycine max HOM05D006161 ORTHO05D007483 5.8e-51 204.5 152 76.3
Carub.0008s2497 Capsella rubella HOM05D006161 ORTHO05D007483 9.9e-51 203.8 148 76.4
TAR622G1105 Trochodendron aralioides HOM05D006161 ORTHO05D007483 9.9e-51 203.8 155 73.5
C09p09680 Brassica napus HOM05D006161 ORTHO05D007483 1.7e-50 203.0 148 76.4
BraA06t26029Z Brassica rapa HOM05D006161 ORTHO05D007483 3.8e-50 201.8 146 76.0
HanXRQChr10g0295861 Helianthus annuus HOM05D006161 ORTHO05D007483 3.8e-50 201.8 151 74.8
Lj5P240T24 Lonicera japonica HOM05D006161 ORTHO05D007483 6.4e-50 201.1 135 83.7
BcaC01g02675 Brassica carinata HOM05D006161 ORTHO05D007483 1.1e-49 200.3 159 74.2
PSO017G6730 Papaver somniferum HOM05D006161 ORTHO05D007483 1.9e-49 199.5 145 76.6
PSO478G0074 Papaver somniferum HOM05D006161 ORTHO05D007483 1.9e-49 199.5 145 76.6
ECA234G1571 Erigeron canadensis HOM05D006161 ORTHO05D007483 5.4e-49 198.0 147 73.5
CDE04G2984 Ceratophyllum demersum HOM05D006161 ORTHO05D007483 4.6e-48 194.9 145 73.1
ClCG09G015360 Citrullus lanatus HOM05D006161 ORTHO05D007483 2.3e-47 192.6 147 74.8
ATR0177G010 Amborella trichopoda HOM05D006161 ORTHO05D007483 3.0e-47 192.2 143 74.1
CiPaw.05G036100 Carya illinoinensis HOM05D006161 ORTHO05D007483 1.9e-46 189.5 154 73.4
Os12g0502100 Oryza sativa ssp. japonica HOM05D006161 ORTHO05D007483 4.3e-46 188.3 145 71.7
SHI16526 Sapria himalayana HOM05D006161 ORTHO05D007483 7.3e-46 187.6 143 70.6
Lj4g0015467 Lotus japonicus HOM05D006161 ORTHO05D007483 3.6e-45 185.3 152 72.4
Nn4g23459 Nelumbo nucifera HOM05D006161 ORTHO05D007483 9.9e-43 177.2 152 69.1
Cc02_g21600 Coffea canephora HOM05D006161 ORTHO05D007483 2.2e-42 176.0 148 70.3
QL11p020678 Quercus lobata HOM05D006161 ORTHO05D007483 2.2e-42 176.0 112 87.5
Cpa.g.sc42.64 Carica papaya HOM05D006161 ORTHO05D007483 8.4e-42 174.1 148 71.6
A06p30900 Brassica napus HOM05D006161 ORTHO05D007483 1.9e-41 172.9 157 65.0
Haze_10694 Corylus avellana HOM05D006161 ORTHO05D007483 3.2e-41 172.2 111 86.5
ECA236G0554 Erigeron canadensis HOM05D006161 ORTHO05D007483 2.7e-40 169.1 148 63.5
Lj6g0024224 Lotus japonicus HOM05D006161 ORTHO05D007483 2.3e-39 166.0 152 68.4
unitig_8.g3487 Utricularia gibba HOM05D006161 ORTHO05D007483 1.9e-38 162.9 224 50.0
Hma1.2p1_0704F.1_g206700 Hydrangea macrophylla HOM05D006161 ORTHO05D007483 1.6e-37 159.8 110 80.9
CDE04G3544 Ceratophyllum demersum HOM05D006161 ORTHO05D007483 2.8e-37 159.1 142 64.1
Ca_18349_v3 Cicer arietinum L. HOM05D006161 ORTHO05D007483 1.1e-36 157.1 152 63.8
Sabra05G0140100 Salix brachista HOM05D006161 ORTHO05D007483 1.4e-36 156.8 123 74.0
Gohir.A12G014900 Gossypium hirsutum HOM05D006161 ORTHO05D007483 4.0e-36 155.2 152 64.5
Actinidia00265 Actinidia chinensis HOM05D006161 ORTHO05D007483 5.3e-36 154.8 146 64.4
TWI14G1282 Tripterygium wilfordii HOM05D006161 ORTHO05D007483 1.3e-34 150.2 176 57.4
Duzib132G0386 Durio zibethinus HOM05D006161 ORTHO05D007483 9.3e-33 144.1 152 61.8
Potri.015G005600 Populus trichocarpa HOM05D006161 ORTHO05D007483 2.1e-32 142.9 157 59.9
AagrBONN_evm.TU.Sc2ySwM_117.171 Anthoceros agrestis HOM05D006161 ORTHO05D007483 2.7e-32 142.5 141 53.2
DCAR_001788 Daucus carota HOM05D006161 ORTHO05D007483 2.7e-32 142.5 112 70.5
HPP92_024935 Vanilla planifolia HOM05D006161 ORTHO05D007483 3.5e-32 142.1 109 76.1
Mapoly0094s0011 Marchantia polymorpha HOM05D006161 ORTHO05D007483 4.6e-32 141.7 144 51.4
SGA_v2.0_scaffold11G05811 Striga asiatica HOM05D006161 ORTHO05D007483 1.0e-31 140.6 150 58.0
Thecc.02G139200 Theobroma cacao HOM05D006161 ORTHO05D007483 1.3e-31 140.2 155 60.0
Zm00001eb409430 Zea mays HOM05D006161 ORTHO05D007483 1.1e-28 130.6 118 62.7
SMO116G0092 Selaginella moellendorffii HOM05D006161 ORTHO05D007483 1.8e-28 129.8 138 49.3
Zm00001eb138120 Zea mays HOM05D006161 ORTHO05D007483 3.1e-28 129.0 104 68.3
Gohir.D12G015300 Gossypium hirsutum HOM05D006161 ORTHO05D007483 5.3e-28 128.3 152 56.6
Gorai.008G015400 Gossypium raimondii HOM05D006161 ORTHO05D007483 5.3e-28 128.3 152 56.6
CDE07G1624 Ceratophyllum demersum HOM05D006161 ORTHO05D007483 4.5e-27 125.2 91 76.9
arahy.Tifrunner.gnm1.ann1.A44469 Arachis hypogaea HOM05D006161 ORTHO05D007483 3.5e-24 115.5 81 81.5
COL.COLO4_13985 Corchorus olitorius HOM05D006161 ORTHO05D007483 5.7e-22 108.2 130 54.6
arahy.Tifrunner.gnm1.ann1.HFW61Q Arachis hypogaea HOM05D006161 ORTHO05D007483 2.1e-16 89.7 66 74.2
Pp3c24_330 Physcomitrium patens HOM05D006161 ORTHO05D007483 2.8e-13 79.3 137 40.1
TPR.G10469 Trifolium pratense HOM05D006161 ORTHO05D007483 6.9e-12 74.7 53 73.6
SalBow1G1176 Salvia bowleyana HOM05D007970 ORTHO05D009943 8.5e-10 67.8 44 77.3
VMungo0540G0821 Vigna mungo HOM05D006161 ORTHO05D007483 5.5e-09 65.1 42 78.6
Actinidia23993 Actinidia chinensis HOM05D006161 ORTHO05D007483 2.1e-08 63.2 127 38.6
CBR_g70737 Chara braunii HOM05D006161 ORTHO05D007483 2.7e-08 62.8 136 31.6


User provided reference genes

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