Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Eucgr.I02633 Eucalyptus grandis HOM05D000361 ORTHO05D008190 2.0e-33 145.2 74 100.0
PGSC0003DMG400012572 Solanum tuberosum HOM05D000361 ORTHO05D008190 2.0e-25 118.6 71 84.5
Atru.chr6.1214 Acer truncatum HOM05D000361 ORTHO05D008190 2.6e-25 118.2 64 95.3
RhsimUnG0105100 Rhododendron simsii HOM05D000361 ORTHO05D008190 2.6e-25 118.2 65 92.3
RhsimUnG0187700 Rhododendron simsii HOM05D000361 ORTHO05D008190 2.6e-25 118.2 65 92.3
CSS0016473 Camellia sinensis var. sinensis HOM05D000361 ORTHO05D008190 5.8e-25 117.1 68 88.2
Sabra19G0028800 Salix brachista HOM05D000361 ORTHO05D008190 9.9e-25 116.3 68 89.7
THA.LOC104819509 Tarenaya hassleriana HOM05D000361 ORTHO05D008190 9.9e-25 116.3 69 87.0
vmacro01841 Vaccinium macrocarpon HOM05D000361 ORTHO05D008190 9.9e-25 116.3 66 89.4
Medtr2g009190 Medicago truncatula HOM05D000361 ORTHO05D008190 3.8e-24 114.4 64 89.1
DCAR_021877 Daucus carota HOM05D000361 ORTHO05D008190 4.9e-24 114.0 68 88.2
FAN24G1062 Fragaria x ananassa HOM05D000361 ORTHO05D008190 8.4e-24 113.2 62 93.5
Lj9A350G62 Lonicera japonica HOM05D000361 ORTHO05D008190 8.4e-24 113.2 64 89.1
GSVIVG01022626001 Vitis vinifera HOM05D000361 ORTHO05D008190 8.4e-24 113.2 68 85.3
FAN27G0220 Fragaria x ananassa HOM05D000361 ORTHO05D008190 1.1e-23 112.8 62 91.9
SalBow5G3846 Salvia bowleyana HOM05D000361 ORTHO05D008190 1.1e-23 112.8 61 95.1
AT2G14050 Arabidopsis thaliana HOM05D000361 ORTHO05D008190 1.4e-23 112.5 64 90.6
Cpa.g.c31478.2 Carica papaya HOM05D000361 ORTHO05D008190 1.9e-23 112.1 68 85.3
Cc02_g21180 Coffea canephora HOM05D000361 ORTHO05D008190 2.4e-23 111.7 61 95.1
Haze_10576 Corylus avellana HOM05D000361 ORTHO05D008190 2.4e-23 111.7 61 95.1
Migut.B00581 Erythranthe guttata HOM05D000361 ORTHO05D008190 2.4e-23 111.7 61 93.4
Thhalv10022581m.g Eutrema salsugineum HOM05D000361 ORTHO05D008190 2.4e-23 111.7 66 87.9
MD05G1047800 Malus domestica HOM05D000361 ORTHO05D008190 2.4e-23 111.7 61 95.1
GSVIVG01022631001 Vitis vinifera HOM05D000361 ORTHO05D008190 2.4e-23 111.7 61 95.1
Actinidia24006 Actinidia chinensis HOM05D000361 ORTHO05D008190 3.2e-23 111.3 61 93.4
Lalb_Chr20g0122951 Lupinus albus HOM05D000361 ORTHO05D008190 3.2e-23 111.3 61 91.8
ClCG09G015670 Citrullus lanatus HOM05D000361 ORTHO05D008190 4.2e-23 110.9 61 93.4
RcHm_v2.0_Chr6g0267231 Rosa chinensis HOM05D000361 ORTHO05D008190 4.2e-23 110.9 61 95.1
Aa31LG8G12490 Aethionema arabicum HOM05D000361 ORTHO05D008190 5.4e-23 110.5 64 89.1
CAN.G523.41 Capsicum annuum HOM05D000361 ORTHO05D008190 5.4e-23 110.5 61 93.4
CiPaw.05G032700 Carya illinoinensis HOM05D000361 ORTHO05D008190 5.4e-23 110.5 61 93.4
Hma1.2p1_0784F.1_g217180 Hydrangea macrophylla HOM05D000361 ORTHO05D008190 5.4e-23 110.5 61 93.4
Prupe.8G065100 Prunus persica HOM05D000361 ORTHO05D008190 5.4e-23 110.5 61 95.1
Sopen01g047990 Solanum pennellii HOM05D000361 ORTHO05D008190 5.4e-23 110.5 61 93.4
Carub.0003s2831 Capsella rubella HOM05D000361 ORTHO05D008190 7.1e-23 110.2 70 82.9
FvH4_2g10130 Fragaria vesca HOM05D000361 ORTHO05D008190 9.3e-23 109.8 61 93.4
FAN15G1148 Fragaria x ananassa HOM05D000361 ORTHO05D008190 9.3e-23 109.8 61 93.4
FAN20G1792 Fragaria x ananassa HOM05D000361 ORTHO05D008190 9.3e-23 109.8 61 93.4
Lsat_1_v5_gn_9_116821 Lactuca sativa HOM05D000361 ORTHO05D008190 9.3e-23 109.8 61 93.4
Lj6g0015129 Lotus japonicus HOM05D000361 ORTHO05D008190 1.2e-22 109.4 61 91.8
Nn5g29999 Nelumbo nucifera HOM05D000361 ORTHO05D008190 1.2e-22 109.4 61 91.8
Ah.01g010080 Amaranthus hybridus HOM05D000361 ORTHO05D008190 1.6e-22 109.0 69 84.1
arahy.Tifrunner.gnm1.ann1.2R0HNS Arachis hypogaea HOM05D000361 ORTHO05D008190 1.6e-22 109.0 61 90.2
arahy.Tifrunner.gnm1.ann1.E9LA23 Arachis hypogaea HOM05D000361 ORTHO05D008190 1.6e-22 109.0 61 90.2
Ciclev10029860m.g Citrus clementina HOM05D000361 ORTHO05D008190 1.6e-22 109.0 61 93.4
ECA240G4379 Erigeron canadensis HOM05D000361 ORTHO05D008190 1.6e-22 109.0 61 91.8
Potri.019G014403 Populus trichocarpa HOM05D000361 ORTHO05D008190 1.6e-22 109.0 61 91.8
PGR142G0624 Punica granatum HOM05D000361 ORTHO05D008190 1.6e-22 109.0 61 91.8
Hund00081 Selenicereus undatus HOM05D000361 ORTHO05D008190 1.6e-22 109.0 61 93.4
Thecc.02G134000 Theobroma cacao HOM05D000361 ORTHO05D008190 1.6e-22 109.0 61 91.8
CsaV3_7G006750 Cucumis sativus L. HOM05D000361 ORTHO05D008190 2.1e-22 108.6 61 91.8
Ca_00146_v3 Cicer arietinum L. HOM05D000361 ORTHO05D008190 2.7e-22 108.2 61 90.2
Glyma.15G055000 Glycine max HOM05D000361 ORTHO05D008190 2.7e-22 108.2 61 90.2
PSO675G7150 Papaver somniferum HOM05D000361 ORTHO05D008190 2.7e-22 108.2 61 91.8
Psat1g215840 Pisum sativum HOM05D000361 ORTHO05D008190 2.7e-22 108.2 61 90.2
Sed0008836 Sechium edule HOM05D000361 ORTHO05D008190 2.7e-22 108.2 61 90.2
SGA_v2.0_scaffold83G26335 Striga asiatica HOM05D000361 ORTHO05D008190 2.7e-22 108.2 61 90.2
Aqoxy6G00715 Aquilegia oxysepala HOM05D000361 ORTHO05D008190 3.5e-22 107.8 61 91.8
PSO541G0659 Papaver somniferum HOM05D000361 ORTHO05D008190 3.5e-22 107.8 61 91.8
PSO541G1218 Papaver somniferum HOM05D000361 ORTHO05D008190 3.5e-22 107.8 61 91.8
TPR.G25250 Trifolium pratense HOM05D005914 ORTHO05D008190 3.5e-22 107.8 61 88.5
MSTRG.20289 Avicennia marina HOM05D000361 ORTHO05D008190 6.0e-22 107.1 63 88.9
AUR62010162 Chenopodium quinoa HOM05D000361 ORTHO05D008190 6.0e-22 107.1 61 91.8
Manes.10G104300 Manihot esculenta HOM05D000361 ORTHO05D008190 6.0e-22 107.1 61 91.8
TAR376G0717 Trochodendron aralioides HOM05D000361 ORTHO05D008190 6.0e-22 107.1 61 90.2
EL10Ac9g21521 Beta vulgaris HOM05D000361 ORTHO05D008190 7.8e-22 106.7 61 90.2
COL.COLO4_32315 Corchorus olitorius HOM05D000361 ORTHO05D008190 7.8e-22 106.7 61 90.2
Gohir.A12G016000 Gossypium hirsutum HOM05D000361 ORTHO05D008190 7.8e-22 106.7 61 88.5
Gohir.D12G016300 Gossypium hirsutum HOM05D000361 ORTHO05D008190 7.8e-22 106.7 61 88.5
HanXRQChr03g0067551 Helianthus annuus HOM05D000361 ORTHO05D008190 7.8e-22 106.7 61 90.2
Phvul.006G204900 Phaseolus vulgaris HOM05D000361 ORTHO05D008190 7.8e-22 106.7 61 88.5
GSVIVG01022621001 Vitis vinifera HOM05D000361 ORTHO05D008190 7.8e-22 106.7 61 91.8
AL3G45720 Arabidopsis lyrata HOM05D000361 ORTHO05D008190 1.3e-21 105.9 61 90.2
BcaB08g34549 Brassica carinata HOM05D000361 ORTHO05D008190 1.3e-21 105.9 61 90.2
A03p45130 Brassica napus HOM05D000361 ORTHO05D008190 1.3e-21 105.9 61 90.2
BraA03t13648Z Brassica rapa HOM05D000361 ORTHO05D008190 1.3e-21 105.9 61 90.2
CARHR104240 Cardamine hirsuta HOM05D000361 ORTHO05D008190 1.3e-21 105.9 61 90.2
AUR62013162 Chenopodium quinoa HOM05D000361 ORTHO05D008190 1.3e-21 105.9 61 90.2
Sc08g0003720 Simmondsia chinensis HOM05D000361 ORTHO05D008190 1.3e-21 105.9 61 88.5
TWI14G0190 Tripterygium wilfordii HOM05D000361 ORTHO05D008190 1.3e-21 105.9 61 90.2
Duzib052G0813 Durio zibethinus HOM05D003001 ORTHO05D008190 1.7e-21 105.5 61 88.5
Gorai.008G016500 Gossypium raimondii HOM05D000361 ORTHO05D008190 2.3e-21 105.1 61 86.9
Sp3g27310 Schrenkiella parvula HOM05D000361 ORTHO05D008190 3.0e-21 104.8 61 90.2
BcaC01g03107 Brassica carinata HOM05D000361 ORTHO05D008190 6.6e-21 103.6 61 88.5
C03p55990 Brassica napus HOM05D000361 ORTHO05D008190 6.6e-21 103.6 61 88.5
BolC3t17883H Brassica oleracea HOM05D000361 ORTHO05D008190 6.6e-21 103.6 61 88.5
HPP92_004759 Vanilla planifolia HOM05D000361 ORTHO05D008190 6.6e-21 103.6 61 86.9
Nitab4.5_0000863g0120 Nicotiana tabacum HOM05D000361 ORTHO05D008190 8.7e-21 103.2 56 91.1
SEGI_16098 Sequoiadendron giganteum HOM05D000361 ORTHO05D008190 1.1e-20 102.8 61 83.6
ATR0684G185 Amborella trichopoda HOM05D000361 ORTHO05D008190 2.5e-20 101.7 61 83.6
Peaxi162Scf01060g00132 Petunia axillaris HOM05D000361 ORTHO05D008190 2.8e-19 98.2 55 87.3
Zm00001eb279300 Zea mays HOM05D000361 ORTHO05D008190 1.4e-18 95.9 61 82.0
Mapoly0080s0056 Marchantia polymorpha HOM05D000361 ORTHO05D008190 2.4e-18 95.1 61 77.0
Pp3c8_2220 Physcomitrium patens HOM05D000361 ORTHO05D008190 5.3e-18 94.0 61 75.4
SMO013G0030 Selaginella moellendorffii HOM05D000361 ORTHO05D008190 5.3e-18 94.0 61 77.0
SHI20332 Sapria himalayana HOM05D000361 ORTHO05D008190 1.2e-17 92.8 56 80.4
Oeu022079.1 Olea europaea HOM05D000361 ORTHO05D008190 2.2e-16 88.6 49 89.8
Nitab4.5_0003959g0080 Nicotiana tabacum HOM05D000361 ORTHO05D008190 2.9e-16 88.2 48 91.7
CBR_g50446 Chara braunii HOM05D000019 ORTHO05D000048 1.4e-15 85.9 59 74.6
Solyc01g105530.3 Solanum lycopersicum HOM05D000361 ORTHO05D008190 2.4e-15 85.1 46 91.3
Oeu007985.1 Olea europaea HOM05D000361 ORTHO05D008190 2.8e-11 71.6 61 63.9
AagrBONN_evm.TU.Sc2ySwM_228.3455 Anthoceros agrestis HOM05D000361 ORTHO05D008190 3.1e-10 68.2 71 49.3
SMO356G0083 Selaginella moellendorffii HOM05D000361 ORTHO05D008190 1.9e-07 58.9 37 78.4
CANSAT11G1764 Cannabis sativa HOM05D000361 ORTHO05D008190 3.5e-06 54.7 53 62.3


User provided reference genes

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