Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Eucgr.I02615 Eucalyptus grandis HOM05D006528 ORTHO05D008117 1.5e-43 179.1 91 100.0
Haze_10502 Corylus avellana HOM05D006528 ORTHO05D008117 8.7e-39 163.3 89 91.0
CiPaw.05G028900 Carya illinoinensis HOM05D006528 ORTHO05D008117 1.1e-38 162.9 89 91.0
Actinidia02398 Actinidia chinensis HOM05D006528 ORTHO05D008117 5.6e-38 160.6 84 95.2
Ciclev10029672m.g Citrus clementina HOM05D006528 ORTHO05D008117 1.3e-37 159.5 91 90.1
Dinv16007 Davidia involucrata HOM05D006528 ORTHO05D008117 1.3e-37 159.5 86 93.0
PSO541G2139 Papaver somniferum HOM05D006528 ORTHO05D008117 1.3e-37 159.5 90 86.7
PSO675G1859 Papaver somniferum HOM05D006528 ORTHO05D008117 1.3e-37 159.5 90 86.7
Lalb_Chr09g0326921 Lupinus albus HOM05D006528 ORTHO05D008117 2.8e-37 158.3 87 88.5
Rhsim11G0141900 Rhododendron simsii HOM05D006528 ORTHO05D008117 3.7e-37 157.9 86 90.7
vmacro01866 Vaccinium macrocarpon HOM05D006528 ORTHO05D008117 8.1e-37 156.8 86 90.7
MD05G1048500 Malus domestica HOM05D006528 ORTHO05D008117 1.1e-36 156.4 90 85.6
Medtr2g009660 Medicago truncatula HOM05D006528 ORTHO05D008117 1.1e-36 156.4 86 89.5
Manes.07G041500 Manihot esculenta HOM05D006528 ORTHO05D008117 1.4e-36 156.0 82 93.9
MD10G1054900 Malus domestica HOM05D006528 ORTHO05D008117 1.8e-36 155.6 90 85.6
FvH4_2g11550 Fragaria vesca HOM05D006528 ORTHO05D008117 2.4e-36 155.2 90 84.4
FAN15G1663 Fragaria x ananassa HOM05D006528 ORTHO05D008117 2.4e-36 155.2 90 84.4
FAN24G2600 Fragaria x ananassa HOM05D006528 ORTHO05D008117 2.4e-36 155.2 90 84.4
FAN27G2089 Fragaria x ananassa HOM05D006528 ORTHO05D008117 2.4e-36 155.2 90 84.4
Psat1g213920 Pisum sativum HOM05D006528 ORTHO05D008117 2.4e-36 155.2 86 88.4
Lalb_Chr16g0382981 Lupinus albus HOM05D006528 ORTHO05D008117 3.1e-36 154.8 87 83.9
RcHm_v2.0_Chr6g0270691 Rosa chinensis HOM05D006528 ORTHO05D008117 3.1e-36 154.8 90 84.4
Aqoxy6G00830 Aquilegia oxysepala HOM05D006528 ORTHO05D008117 4.0e-36 154.5 88 83.0
COL.COLO4_32404 Corchorus olitorius HOM05D006528 ORTHO05D008117 5.3e-36 154.1 91 85.7
Glyma.07G182600 Glycine max HOM05D006528 ORTHO05D008117 5.3e-36 154.1 91 83.5
Atru.chr6.1284 Acer truncatum HOM05D006528 ORTHO05D008117 6.9e-36 153.7 91 86.8
Cc02_g20840 Coffea canephora HOM05D006528 ORTHO05D008117 6.9e-36 153.7 86 89.5
Glyma.08G067300 Glycine max HOM05D006528 ORTHO05D008117 6.9e-36 153.7 90 83.3
Lj4g0001130 Lotus japonicus HOM05D006528 ORTHO05D008117 6.9e-36 153.7 91 82.4
Dinv24144 Davidia involucrata HOM05D006528 ORTHO05D008117 9.0e-36 153.3 88 89.8
Duzib248G1107 Durio zibethinus HOM05D006528 ORTHO05D008117 9.0e-36 153.3 79 96.2
FAN20G2769 Fragaria x ananassa HOM05D006528 ORTHO05D008117 9.0e-36 153.3 90 83.3
Nitab4.5_0000001g0270 Nicotiana tabacum HOM05D006528 ORTHO05D008117 9.0e-36 153.3 94 85.1
Thecc.02G128200 Theobroma cacao HOM05D006528 ORTHO05D008117 9.0e-36 153.3 88 89.8
Nitab4.5_0001093g0020 Nicotiana tabacum HOM05D006528 ORTHO05D008117 1.2e-35 152.9 94 84.0
Oeu027056.1 Olea europaea HOM05D006528 ORTHO05D008117 1.5e-35 152.5 94 86.2
CANSAT21G1972 Cannabis sativa HOM05D006528 ORTHO05D008117 2.6e-35 151.8 90 83.3
TWI14G0454 Tripterygium wilfordii HOM05D006528 ORTHO05D008117 2.6e-35 151.8 91 82.4
Peaxi162Scf00152g00928 Petunia axillaris HOM05D006528 ORTHO05D008117 3.4e-35 151.4 92 84.8
Ca_18387_v3 Cicer arietinum L. HOM05D006528 ORTHO05D008117 5.8e-35 150.6 85 87.1
arahy.Tifrunner.gnm1.ann1.P7ITSZ Arachis hypogaea HOM05D006528 ORTHO05D008117 7.6e-35 150.2 84 88.1
CAN.G31.4 Capsicum annuum HOM05D006528 ORTHO05D008117 7.6e-35 150.2 81 92.6
Medtr4g093660 Medicago truncatula HOM05D006528 ORTHO05D008117 7.6e-35 150.2 86 84.9
DCAR_003600 Daucus carota HOM05D006528 ORTHO05D008117 9.9e-35 149.8 86 84.9
Hma1.2p1_1093F.1_g256310 Hydrangea macrophylla HOM05D006528 ORTHO05D008117 9.9e-35 149.8 87 88.5
Psat7g101760 Pisum sativum HOM05D006528 ORTHO05D008117 9.9e-35 149.8 85 84.7
Prupe.8G071000 Prunus persica HOM05D006528 ORTHO05D008117 9.9e-35 149.8 97 81.4
PGR142G2367 Punica granatum HOM05D006528 ORTHO05D008117 9.9e-35 149.8 87 87.4
Nn5g29836 Nelumbo nucifera HOM05D006528 ORTHO05D008117 1.3e-34 149.4 88 83.0
arahy.Tifrunner.gnm1.ann1.AY2SMN Arachis hypogaea HOM05D006528 ORTHO05D008117 1.7e-34 149.1 84 86.9
QL11p025380 Quercus lobata HOM05D006528 ORTHO05D008117 1.7e-34 149.1 118 70.3
Sc05g0005550 Simmondsia chinensis HOM05D006528 ORTHO05D008117 1.7e-34 149.1 90 80.0
CSS0011274 Camellia sinensis var. sinensis HOM05D006528 ORTHO05D008117 2.2e-34 148.7 82 89.0
Ah.01g007370 Amaranthus hybridus HOM05D006528 ORTHO05D008117 2.9e-34 148.3 84 86.9
Lj9A347T51 Lonicera japonica HOM05D006528 ORTHO05D008117 2.9e-34 148.3 86 87.2
Sed0017031 Sechium edule HOM05D006528 ORTHO05D008117 2.9e-34 148.3 83 88.0
ECA234G2655 Erigeron canadensis HOM05D006528 ORTHO05D008117 3.8e-34 147.9 82 86.6
Sopen11g019700 Solanum pennellii HOM05D006528 ORTHO05D008117 3.8e-34 147.9 81 91.4
PGSC0003DMG400025320 Solanum tuberosum HOM05D006528 ORTHO05D008117 3.8e-34 147.9 81 91.4
PGSC0003DMG400039300 Solanum tuberosum HOM05D006528 ORTHO05D008117 3.8e-34 147.9 81 91.4
TAR628G0148 Trochodendron aralioides HOM05D006528 ORTHO05D008117 3.8e-34 147.9 80 90.0
GSVIVG01012516001 Vitis vinifera HOM05D006528 ORTHO05D008117 3.8e-34 147.9 82 89.0
MBI16_g06019_MAGBIO Magnolia biondii HOM05D006528 ORTHO05D008117 4.9e-34 147.5 109 71.6
CDE07G0501 Ceratophyllum demersum HOM05D006528 ORTHO05D008117 6.4e-34 147.1 90 78.9
Ca_00167_v3 Cicer arietinum L. HOM05D006528 ORTHO05D008117 6.4e-34 147.1 86 87.2
Zm00001eb053530 Zea mays HOM05D006528 ORTHO05D008117 6.4e-34 147.1 86 84.9
arahy.Tifrunner.gnm1.ann1.UT9VTR Arachis hypogaea HOM05D006528 ORTHO05D008117 8.4e-34 146.7 82 85.4
ClCG10G009640 Citrullus lanatus HOM05D006528 ORTHO05D008117 8.4e-34 146.7 90 80.0
MELO3C018053.2 Cucumis melo HOM05D006528 ORTHO05D008117 1.1e-33 146.4 90 80.0
Gohir.A13G050500 Gossypium hirsutum HOM05D006528 ORTHO05D008117 1.1e-33 146.4 90 81.1
Lsat_1_v5_gn_7_82720 Lactuca sativa HOM05D006528 ORTHO05D008117 1.1e-33 146.4 86 83.7
Potri.007G116400 Populus trichocarpa HOM05D006528 ORTHO05D008117 1.1e-33 146.4 92 82.6
Gohir.D13G049300 Gossypium hirsutum HOM05D006528 ORTHO05D008117 1.9e-33 145.6 91 80.2
Phvul.002G213700 Phaseolus vulgaris HOM05D006528 ORTHO05D008117 2.4e-33 145.2 84 84.5
Sabra07G0094700 Salix brachista HOM05D006528 ORTHO05D008117 2.4e-33 145.2 92 81.5
Nn1g05616 Nelumbo nucifera HOM05D006528 ORTHO05D008117 3.2e-33 144.8 79 89.9
Os03g0690000 Oryza sativa ssp. japonica HOM05D006528 ORTHO05D008117 3.2e-33 144.8 86 81.4
Ah.01g023880 Amaranthus hybridus HOM05D006528 ORTHO05D008117 4.2e-33 144.4 83 85.5
CARHR241740 Cardamine hirsuta HOM05D006528 ORTHO05D008117 4.2e-33 144.4 93 77.4
arahy.Tifrunner.gnm1.ann1.QJC347 Arachis hypogaea HOM05D006528 ORTHO05D008117 5.5e-33 144.1 82 84.1
Migut.B00544 Erythranthe guttata HOM05D006528 ORTHO05D008117 5.5e-33 144.1 79 89.9
EL10Ac9g22060 Beta vulgaris HOM05D006528 ORTHO05D008117 9.3e-33 143.3 84 83.3
AUR62030940 Chenopodium quinoa HOM05D006528 ORTHO05D008117 1.2e-32 142.9 91 80.2
HanXRQChr08g0227171 Helianthus annuus HOM05D006528 ORTHO05D008117 1.6e-32 142.5 81 86.4
AUR62027098 Chenopodium quinoa HOM05D006528 ORTHO05D008117 2.1e-32 142.1 80 86.2
Hund06469 Selenicereus undatus HOM05D006528 ORTHO05D008117 2.1e-32 142.1 84 82.1
HPP92_001604 Vanilla planifolia HOM05D006528 ORTHO05D008117 2.7e-32 141.7 91 78.0
ATR0767G170 Amborella trichopoda HOM05D006528 ORTHO05D008117 7.9e-32 140.2 90 78.9
Lsat_1_v5_gn_5_110181 Lactuca sativa HOM05D006528 ORTHO05D008117 1.8e-31 139.0 83 81.9
BcaC09g52175 Brassica carinata HOM05D006528 ORTHO05D008117 2.3e-31 138.7 96 72.9
C01p05070 Brassica napus HOM05D006528 ORTHO05D008117 2.3e-31 138.7 96 72.9
BolC1t00489H Brassica oleracea HOM05D006528 ORTHO05D008117 2.3e-31 138.7 96 72.9
SEGI_09895 Sequoiadendron giganteum HOM05D006528 ORTHO05D008117 2.3e-31 138.7 86 82.6
unitig_0.g617 Utricularia gibba HOM05D006528 ORTHO05D008117 2.3e-31 138.7 83 84.3
Cfa004847 Carpinus fangiana HOM05D006528 ORTHO05D008117 3.9e-31 137.9 73 91.8
Thhalv10026671m.g Eutrema salsugineum HOM05D006528 ORTHO05D008117 3.9e-31 137.9 81 79.0
Sp7g31370 Schrenkiella parvula HOM05D006528 ORTHO05D008117 3.9e-31 137.9 81 79.0
THA.LOC104819510 Tarenaya hassleriana HOM05D006528 ORTHO05D008117 3.9e-31 137.9 81 79.0
Carub.0007s0679 Capsella rubella HOM05D006528 ORTHO05D008117 5.1e-31 137.5 82 79.3
Sed0022924 Sechium edule HOM05D006528 ORTHO05D008117 6.7e-31 137.1 95 73.7
Aa31sc21G60 Aethionema arabicum HOM05D006528 ORTHO05D008117 8.7e-31 136.7 89 71.9
A01p04680 Brassica napus HOM05D006528 ORTHO05D008117 8.7e-31 136.7 82 78.0
BraA01t00451Z Brassica rapa HOM05D006528 ORTHO05D008117 8.7e-31 136.7 82 78.0
HanXRQChr10g0297761 Helianthus annuus HOM05D006528 ORTHO05D008117 1.9e-30 135.6 79 82.3
AL7G17860 Arabidopsis lyrata HOM05D006528 ORTHO05D008117 2.5e-30 135.2 80 78.8
AT4G33640 Arabidopsis thaliana HOM05D006528 ORTHO05D008117 2.5e-30 135.2 82 76.8
VMungo0251G1582 Vigna mungo HOM05D006528 ORTHO05D008117 3.3e-30 134.8 98 71.4
Potri.017G042432 Populus trichocarpa HOM05D006528 ORTHO05D008117 2.0e-27 125.6 82 75.6
SMO358G0255 Selaginella moellendorffii HOM05D006528 ORTHO05D008117 2.6e-27 125.2 78 78.2
Mapoly0189s0006 Marchantia polymorpha HOM05D006528 ORTHO05D008117 8.4e-26 120.2 78 74.4
SalBow6G4989 Salvia bowleyana HOM05D006528 ORTHO05D008117 1.1e-25 119.8 145 51.0
ECA236G0856 Erigeron canadensis HOM05D006528 ORTHO05D008117 1.9e-25 119.0 68 86.8
SalBow6G1122 Salvia bowleyana HOM05D006528 ORTHO05D008117 3.2e-25 118.2 137 50.4
MCO12G136 Micromonas commoda HOM05D006528 ORTHO05D008117 1.8e-23 112.5 78 69.2
Solyc11g044230.3 Solanum lycopersicum HOM05D006528 ORTHO05D008117 3.0e-23 111.7 62 90.3
Pp3c17_23010 Physcomitrium patens HOM05D006528 ORTHO05D008117 6.7e-23 110.5 78 67.9
CsaV3_4G014760 Cucumis sativus L. HOM05D006528 ORTHO05D008117 1.1e-20 103.2 65 75.4
Hma1.2p1_0160F.1_g070933 Hydrangea macrophylla HOM05D006528 ORTHO05D008117 1.8e-15 85.9 52 82.7
Hma1.2p1_1174F.1_g263935 Hydrangea macrophylla HOM05D006528 ORTHO05D008117 1.8e-15 85.9 52 82.7
Hma1.2p1_1518F.1_g288560 Hydrangea macrophylla HOM05D006528 ORTHO05D008117 1.8e-15 85.9 52 82.7
PRCOL_00002361 Prasinoderma coloniale HOM05D006528 ORTHO05D008117 3.9e-15 84.7 92 50.0
Actinidia00310 Actinidia chinensis HOM05D006528 ORTHO05D008117 2.5e-14 82.0 49 83.7
Gorai.013G055100 Gossypium raimondii HOM05D006528 ORTHO05D008117 4.2e-09 64.7 45 73.3


User provided reference genes

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