Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Eucgr.I02597 Eucalyptus grandis HOM05D004557 ORTHO05D005258 2.1e-82 308.9 152 100.0
Eucgr.J00345 Eucalyptus grandis HOM05D004557 ORTHO05D005258 7.7e-48 194.1 91 98.9
Eucgr.L01064 Eucalyptus grandis HOM05D004557 ORTHO05D005258 8.5e-47 190.7 89 98.9
Eucgr.I00413 Eucalyptus grandis HOM05D004557 ORTHO05D005258 1.1e-30 137.1 91 73.6
Dinv06254 Davidia involucrata HOM05D004557 ORTHO05D005258 8.3e-26 120.9 105 56.2
Dinv15528 Davidia involucrata HOM05D004557 ORTHO05D005258 8.3e-26 120.9 105 56.2
MD08G1069500 Malus domestica HOM05D004557 ORTHO05D005258 1.2e-24 117.1 107 52.3
Potri.006G223100 Populus trichocarpa HOM05D004557 ORTHO05D005258 2.0e-24 116.3 101 51.5
Dinv29489 Davidia involucrata HOM05D004557 ORTHO05D005258 3.5e-24 115.5 105 54.3
MD15G1052600 Malus domestica HOM05D004557 ORTHO05D005258 2.2e-23 112.8 105 51.4
Sabra06G0172400 Salix brachista HOM05D004557 ORTHO05D005258 1.9e-22 109.8 100 51.0
Hma1.2p1_0231F.1_g097480 Hydrangea macrophylla HOM05D004557 ORTHO05D005258 2.5e-22 109.4 98 53.1
Manes.03G052300 Manihot esculenta HOM05D004557 ORTHO05D005258 2.5e-22 109.4 93 53.8
Prupe.1G406500 Prunus persica HOM05D004557 ORTHO05D005258 2.5e-22 109.4 109 50.5
Duzib084G1100 Durio zibethinus HOM05D006762 ORTHO05D003505 1.2e-21 107.1 94 53.2
Actinidia25701 Actinidia chinensis HOM05D004557 ORTHO05D005258 2.1e-21 106.3 129 45.0
QL02p000341 Quercus lobata HOM05D004557 ORTHO05D005258 3.6e-21 105.5 105 51.4
CiPaw.09G214400 Carya illinoinensis HOM05D004557 ORTHO05D005258 1.0e-20 104.0 107 46.7
CsaV3_6G032010 Cucumis sativus L. HOM05D004557 ORTHO05D005258 5.2e-20 101.7 97 51.5
CiPaw.15G089600 Carya illinoinensis HOM05D004557 ORTHO05D005258 8.8e-20 100.9 110 46.4
CiPaw.15G089700 Carya illinoinensis HOM05D004557 ORTHO05D005258 8.8e-20 100.9 110 46.4
CiPaw.15G090600 Carya illinoinensis HOM05D004557 ORTHO05D005258 8.8e-20 100.9 110 46.4
Atru.chr7.1871 Acer truncatum HOM05D004557 ORTHO05D005258 1.5e-19 100.1 94 50.0
CSS0012791 Camellia sinensis var. sinensis HOM05D004557 ORTHO05D005258 1.5e-19 100.1 94 53.2
CiPaw.15G090500 Carya illinoinensis HOM05D004557 ORTHO05D005258 2.0e-19 99.8 103 45.6
Thecc.03G250200 Theobroma cacao HOM05D004557 ORTHO05D005258 2.6e-19 99.4 104 51.9
MELO3C011480.2 Cucumis melo HOM05D004557 ORTHO05D005258 3.4e-19 99.0 97 50.5
TWI34G1499 Tripterygium wilfordii HOM05D004557 ORTHO05D005258 7.5e-19 97.8 108 46.3
Lj7A235T21 Lonicera japonica HOM05D004557 ORTHO05D005258 9.8e-19 97.4 97 53.6
ClCG08G009910 Citrullus lanatus HOM05D004557 ORTHO05D005258 1.3e-18 97.1 97 49.5
Rhsim01G0109000 Rhododendron simsii HOM05D004557 ORTHO05D005258 1.3e-18 97.1 100 48.0
Cpa.g.sc126.43 Carica papaya HOM05D004557 ORTHO05D005258 2.2e-18 96.3 95 50.5
Cfa018005 Carpinus fangiana HOM05D004557 ORTHO05D005258 6.3e-18 94.7 103 45.6
Lsat_1_v5_gn_7_60080 Lactuca sativa HOM05D004557 ORTHO05D005258 6.3e-18 94.7 90 46.7
Aqoxy7G01097 Aquilegia oxysepala HOM05D004557 ORTHO05D005258 1.1e-17 94.0 98 43.9
TAR383G0817 Trochodendron aralioides HOM05D004557 ORTHO05D005258 1.4e-17 93.6 130 38.5
Gorai.004G198100 Gossypium raimondii HOM05D004557 ORTHO05D005258 1.8e-17 93.2 86 52.3
SGA_v2.0_scaffold20G09180 Striga asiatica HOM05D004557 ORTHO05D005258 1.8e-17 93.2 102 46.1
SGA_v2.0_scaffold64G21858 Striga asiatica HOM05D000448 ORTHO05D000291 1.8e-17 93.2 106 48.1
Gohir.D08G188200 Gossypium hirsutum HOM05D004557 ORTHO05D005258 4.1e-17 92.0 87 50.6
Rhsim09G0050500 Rhododendron simsii HOM05D004557 ORTHO05D005258 1.6e-16 90.1 96 46.9
HanXRQChr09g0248091 Helianthus annuus HOM05D004557 ORTHO05D005258 3.5e-16 89.0 93 45.2
Medtr3g104830 Medicago truncatula HOM05D004557 ORTHO05D005258 4.5e-16 88.6 90 47.8
RcHm_v2.0_Chr7g0228051 Rosa chinensis HOM05D004557 ORTHO05D005258 1.0e-15 87.4 86 50.0
Sed0027657 Sechium edule HOM05D004557 ORTHO05D005258 1.0e-15 87.4 97 46.4
Lalb_Chr19g0132651 Lupinus albus HOM05D004557 ORTHO05D005258 1.7e-15 86.7 122 42.6
COL.COLO4_37167 Corchorus olitorius HOM05D004557 ORTHO05D005258 2.3e-15 86.3 104 47.1
Oeu037989.1 Olea europaea HOM05D004557 ORTHO05D005258 2.3e-15 86.3 102 46.1
TPR.G3531 Trifolium pratense HOM05D004557 ORTHO05D005258 2.3e-15 86.3 90 42.2
Nn5g28590 Nelumbo nucifera HOM05D004557 ORTHO05D005258 6.6e-15 84.7 101 43.6
Ca_15841_v3 Cicer arietinum L. HOM05D002542 ORTHO05D010145 1.5e-14 83.6 90 43.3
DCAR_004389 Daucus carota HOM05D004557 ORTHO05D005258 1.5e-14 83.6 97 47.4
PSO388G0001 Papaver somniferum HOM05D004557 ORTHO05D005258 1.9e-14 83.2 97 37.1
CANSAT21G2041 Cannabis sativa HOM05D004557 ORTHO05D005258 3.3e-14 82.4 101 42.6
FAN08G0395 Fragaria x ananassa HOM05D004557 ORTHO05D005258 5.6e-14 81.6 83 48.2
Lalb_Chr08g0244871 Lupinus albus HOM05D004557 ORTHO05D005258 2.1e-13 79.7 110 40.9
DCAR_004388 Daucus carota HOM05D004557 ORTHO05D005258 2.8e-13 79.3 83 43.4
ECA240G2282 Erigeron canadensis HOM05D004557 ORTHO05D005258 2.8e-13 79.3 102 42.2
Nn6g35588 Nelumbo nucifera HOM05D004557 ORTHO05D005258 2.8e-13 79.3 115 35.7
PSO210G7071 Papaver somniferum HOM05D004557 ORTHO05D005258 2.8e-13 79.3 100 38.0
FAN13G2684 Fragaria x ananassa HOM05D004557 ORTHO05D005258 3.6e-13 79.0 83 47.0
FvH4_5g32040 Fragaria vesca HOM05D004557 ORTHO05D005258 8.0e-13 77.8 83 47.0
FAN18G0835 Fragaria x ananassa HOM05D004557 ORTHO05D005258 8.0e-13 77.8 83 47.0
Psat7g051600 Pisum sativum HOM05D004557 ORTHO05D005258 1.0e-12 77.4 89 41.6
Nitab4.5_0007748g0010 Nicotiana tabacum HOM05D002542 ORTHO05D010145 1.4e-12 77.0 110 40.9
arahy.Tifrunner.gnm1.ann1.R4HSFZ Arachis hypogaea HOM05D004557 ORTHO05D005258 2.3e-12 76.3 91 45.1
FAN06G3367 Fragaria x ananassa HOM05D004557 ORTHO05D005258 3.0e-12 75.9 124 36.3
DCAR_000813 Daucus carota HOM05D004557 ORTHO05D005258 5.2e-12 75.1 91 39.6
FAN04G2671 Fragaria x ananassa HOM05D004557 ORTHO05D005258 5.2e-12 75.1 83 45.8
Nitab4.5_0004953g0040 Nicotiana tabacum HOM05D002542 ORTHO05D010145 5.2e-12 75.1 103 41.7
Psat5g030600 Pisum sativum HOM05D004557 ORTHO05D005258 6.8e-12 74.7 89 38.2
THA.LOC104827156 Tarenaya hassleriana HOM05D004557 ORTHO05D005258 6.8e-12 74.7 92 41.3
vmacro20759 Vaccinium macrocarpon HOM05D004557 ORTHO05D005258 2.0e-11 73.2 106 39.6
Haze_18125 Corylus avellana HOM05D004557 ORTHO05D005258 2.6e-11 72.8 64 53.1
Lj1g0020695 Lotus japonicus HOM05D004557 ORTHO05D005258 2.6e-11 72.8 82 41.5
Phvul.009G080800 Phaseolus vulgaris HOM05D004557 ORTHO05D005258 2.6e-11 72.8 88 37.5
Glyma.06G198300 Glycine max HOM05D004557 ORTHO05D005258 3.4e-11 72.4 83 39.8
Glyma.20G016400 Glycine max HOM05D004557 ORTHO05D005258 4.4e-11 72.0 83 39.8
Glyma.20G016500 Glycine max HOM05D004557 ORTHO05D005258 4.4e-11 72.0 83 39.8
ClCG05G018170 Citrullus lanatus HOM05D004557 ORTHO05D005258 1.3e-10 70.5 104 35.6
Gohir.D08G268633 Gossypium hirsutum HOM05D004557 ORTHO05D005258 1.3e-10 70.5 97 41.2
Migut.B01423 Erythranthe guttata HOM05D004557 ORTHO05D005258 2.2e-10 69.7 113 38.9
Glyma.04G054800 Glycine max HOM05D004557 ORTHO05D005258 2.9e-10 69.3 94 40.4
Glyma.20G016100 Glycine max HOM05D004557 ORTHO05D005258 2.9e-10 69.3 104 33.7
Sed0013662 Sechium edule HOM05D004557 ORTHO05D005258 3.7e-10 68.9 103 34.0
arahy.Tifrunner.gnm1.ann1.50HX4L Arachis hypogaea HOM05D004557 ORTHO05D005258 1.4e-09 67.0 107 38.3
Cc08_g01350 Coffea canephora HOM05D004557 ORTHO05D005258 1.8e-09 66.6 90 40.0
SalBow5G2684 Salvia bowleyana HOM05D004557 ORTHO05D005258 1.8e-09 66.6 112 38.4
Medtr3g465110 Medicago truncatula HOM05D004557 ORTHO05D005258 2.4e-09 66.2 89 34.8
VMungo1309G0311 Vigna mungo HOM05D004557 ORTHO05D005258 4.1e-09 65.5 83 36.1
AUR62009097 Chenopodium quinoa HOM05D004557 ORTHO05D005258 1.6e-08 63.5 89 36.0
CAN.G1245.2 Capsicum annuum HOM05D004557 ORTHO05D005258 3.5e-08 62.4 103 37.9
SGA_v2.0_scaffold98G29377 Striga asiatica HOM05D004557 ORTHO05D005258 1.0e-07 60.8 93 39.8
VMungo1309G1176 Vigna mungo HOM05D004557 ORTHO05D005258 1.0e-07 60.8 104 32.7
FAN10G3179 Fragaria x ananassa HOM05D018527 ORTHO05D005258 3.0e-07 59.3 86 38.4
FAN01G3115 Fragaria x ananassa HOM05D018527 ORTHO05D005258 3.9e-07 58.9 89 37.1
Sp6g28040 Schrenkiella parvula HOM05D004557 ORTHO05D005258 1.5e-06 57.0 76 34.2
Peaxi162Scf00809g00213 Petunia axillaris HOM05D002542 ORTHO05D010145 2.5e-06 56.2 123 31.7
Duzib106G2021 Durio zibethinus HOM05D004557 ORTHO05D005258 4.3e-06 55.5 61 44.3
BcaNung02221 Brassica carinata HOM05D004557 ORTHO05D005258 5.6e-06 55.1 76 34.2
HPP92_024782 Vanilla planifolia HOM05D004557 ORTHO05D005258 5.6e-06 55.1 84 34.5
Solyc08g062200.3 Solanum lycopersicum HOM05D002542 ORTHO05D010145 7.3e-06 54.7 94 33.0
unitig_26.g8849 Utricularia gibba HOM05D004557 ORTHO05D005258 7.3e-06 54.7 80 35.0


User provided reference genes

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