Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Eucgr.I02552 Eucalyptus grandis HOM05D007716 ORTHO05D009780 1.7e-79 299.3 153 100.0
Eucgr.I02564 Eucalyptus grandis HOM05D007716 ORTHO05D009780 1.1e-62 243.4 132 94.7
Sabra09G0062200 Salix brachista HOM05D007716 ORTHO05D009780 1.5e-22 110.2 132 44.7
Potri.009G080400 Populus trichocarpa HOM05D007716 ORTHO05D009780 8.1e-21 104.4 132 42.4
PGR142G1403 Punica granatum HOM05D007716 ORTHO05D009780 2.3e-20 102.8 140 42.9
Potri.001G286200 Populus trichocarpa HOM05D007716 ORTHO05D009780 2.0e-19 99.8 97 47.4
Sabra16G0178700 Salix brachista HOM05D007716 ORTHO05D009780 3.4e-19 99.0 132 40.2
Nn5g29758 Nelumbo nucifera HOM05D007716 ORTHO05D009780 2.9e-18 95.9 118 41.5
QL11p026900 Quercus lobata HOM05D007716 ORTHO05D009780 4.9e-18 95.1 134 42.5
Migut.B00514 Erythranthe guttata HOM05D007716 ORTHO05D009780 6.4e-18 94.7 87 50.6
Haze_10368 Corylus avellana HOM05D007716 ORTHO05D009780 1.1e-17 94.0 97 46.4
Lsat_1_v5_gn_7_83180 Lactuca sativa HOM05D007716 ORTHO05D009780 1.9e-17 93.2 85 51.8
Hma1.2p1_0703F.1_g206280 Hydrangea macrophylla HOM05D007716 ORTHO05D009780 3.2e-17 92.4 137 40.1
CiPaw.05G026000 Carya illinoinensis HOM05D007716 ORTHO05D009780 5.4e-17 91.7 138 41.3
Ciclev10029299m.g Citrus clementina HOM05D007716 ORTHO05D009780 9.2e-17 90.9 138 38.4
Duzib132G0367 Durio zibethinus HOM05D007716 ORTHO05D009780 2.1e-16 89.7 134 40.3
Thecc.02G037300 Theobroma cacao HOM05D007716 ORTHO05D009780 2.1e-16 89.7 136 39.0
ClCG10G009750 Citrullus lanatus HOM05D007716 ORTHO05D009780 2.7e-16 89.4 105 43.8
RcHm_v2.0_Chr6g0269271 Rosa chinensis HOM05D007716 ORTHO05D009780 2.7e-16 89.4 132 37.1
Glyma.15G060900 Glycine max HOM05D007716 ORTHO05D009780 4.6e-16 88.6 135 40.0
Cpa.g.sc20.53 Carica papaya HOM05D007716 ORTHO05D009780 6.0e-16 88.2 135 40.7
TWI23G0541 Tripterygium wilfordii HOM05D007716 ORTHO05D009780 7.8e-16 87.8 134 39.6
Glyma.13G254000 Glycine max HOM05D007716 ORTHO05D009780 1.0e-15 87.4 135 39.3
Aqoxy6G00623 Aquilegia oxysepala HOM05D000043 ORTHO05D002888 1.3e-15 87.0 135 38.5
THA.LOC104799649 Tarenaya hassleriana HOM05D007716 ORTHO05D009780 1.7e-15 86.7 144 36.1
VMungo0540G1513 Vigna mungo HOM05D007716 ORTHO05D009780 2.3e-15 86.3 103 43.7
Sopen01g048750 Solanum pennellii HOM05D007716 ORTHO05D009780 3.9e-15 85.5 87 44.8
Sed0024047 Sechium edule HOM05D007716 ORTHO05D009780 5.1e-15 85.1 137 38.0
MSTRG.16641 Avicennia marina HOM05D007716 ORTHO05D009780 6.6e-15 84.7 127 39.4
Gorai.008G042500 Gossypium raimondii HOM05D007716 ORTHO05D009780 6.6e-15 84.7 92 43.5
Manes.10G092200 Manihot esculenta HOM05D007716 ORTHO05D009780 6.6e-15 84.7 136 35.3
PSO210G3893 Papaver somniferum HOM05D007716 ORTHO05D009780 6.6e-15 84.7 136 38.2
COL.COLO4_17851 Corchorus olitorius HOM05D007716 ORTHO05D009780 8.6e-15 84.3 87 46.0
FAN27G0331 Fragaria x ananassa HOM05D007716 ORTHO05D009780 1.1e-14 84.0 152 33.6
Gohir.D12G040700 Gossypium hirsutum HOM05D007716 ORTHO05D009780 1.1e-14 84.0 92 43.5
Solyc01g106380.2 Solanum lycopersicum HOM05D007716 ORTHO05D009780 1.1e-14 84.0 137 38.0
Atru.chr6.1374 Acer truncatum HOM05D007716 ORTHO05D009780 1.5e-14 83.6 132 34.1
Lj6g0015505 Lotus japonicus HOM05D007716 ORTHO05D009780 1.5e-14 83.6 132 37.9
Nitab4.5_0010352g0060 Nicotiana tabacum HOM05D007716 ORTHO05D009780 1.5e-14 83.6 106 40.6
Oeu059885.1 Olea europaea HOM05D007716 ORTHO05D009780 1.5e-14 83.6 142 34.5
Carub.0008s2527 Capsella rubella HOM05D007716 ORTHO05D009780 1.9e-14 83.2 94 41.5
FAN24G2612 Fragaria x ananassa HOM05D007716 ORTHO05D009780 1.9e-14 83.2 132 34.8
FvH4_2g11070 Fragaria vesca HOM05D007716 ORTHO05D009780 2.5e-14 82.8 132 34.8
FAN20G1331 Fragaria x ananassa HOM05D007716 ORTHO05D009780 2.5e-14 82.8 132 34.1
ECA236G5147 Erigeron canadensis HOM05D007716 ORTHO05D009780 3.3e-14 82.4 67 49.3
Nitab4.5_0009020g0070 Nicotiana tabacum HOM05D007716 ORTHO05D009780 3.3e-14 82.4 87 44.8
FAN15G0824 Fragaria x ananassa HOM05D007716 ORTHO05D009780 4.3e-14 82.0 132 34.1
MBI16_g17833_MAGBIO Magnolia biondii HOM05D007716 ORTHO05D009780 4.3e-14 82.0 129 39.5
Actinidia02415 Actinidia chinensis HOM05D007716 ORTHO05D009780 5.6e-14 81.6 128 43.0
PSO761G0345 Papaver somniferum HOM05D007716 ORTHO05D009780 7.3e-14 81.3 136 38.2
PGSC0003DMG400003116 Solanum tuberosum HOM05D007716 ORTHO05D009780 7.3e-14 81.3 140 36.4
arahy.Tifrunner.gnm1.ann1.84YYIV Arachis hypogaea HOM05D007716 ORTHO05D009780 9.5e-14 80.9 144 35.4
SGA_v2.0_scaffold342G49411 Striga asiatica HOM05D007716 ORTHO05D009780 9.5e-14 80.9 100 43.0
unitig_61.g26045 Utricularia gibba HOM05D007716 ORTHO05D009780 9.5e-14 80.9 109 40.4
arahy.Tifrunner.gnm1.ann1.1SXR49 Arachis hypogaea HOM05D007716 ORTHO05D009780 1.2e-13 80.5 145 35.2
DCAR_029284 Daucus carota HOM05D007716 ORTHO05D009780 1.2e-13 80.5 87 39.1
Gohir.A12G031600 Gossypium hirsutum HOM05D007716 ORTHO05D009780 1.2e-13 80.5 92 41.3
Prupe.8G076600 Prunus persica HOM05D007716 ORTHO05D009780 1.6e-13 80.1 136 36.0
CARHR278450 Cardamine hirsuta HOM05D007716 ORTHO05D009780 2.1e-13 79.7 92 39.1
Phvul.006G198900 Phaseolus vulgaris HOM05D007716 ORTHO05D009780 2.1e-13 79.7 111 38.7
vmacro01903 Vaccinium macrocarpon HOM05D001206 ORTHO05D002068 2.1e-13 79.7 92 45.7
TPR.G32644 Trifolium pratense HOM05D007716 ORTHO05D009780 2.8e-13 79.3 132 34.8
Sc14g0003580 Simmondsia chinensis HOM05D007716 ORTHO05D009780 4.7e-13 78.6 129 39.5
Ca_00186_v3 Cicer arietinum L. HOM05D007716 ORTHO05D009780 8.1e-13 77.8 133 38.3
Cc02_g20520 Coffea canephora HOM05D007716 ORTHO05D009780 1.1e-12 77.4 142 35.9
Peaxi162Scf00299g00026 Petunia axillaris HOM05D007716 ORTHO05D009780 1.1e-12 77.4 87 40.2
Ah.01g024230 Amaranthus hybridus HOM05D007716 ORTHO05D009780 1.4e-12 77.0 106 33.0
A06p31220 Brassica napus HOM05D007716 ORTHO05D009780 1.8e-12 76.6 94 37.2
BraA06t26061Z Brassica rapa HOM05D007716 ORTHO05D009780 1.8e-12 76.6 94 37.2
TAR628G0805 Trochodendron aralioides HOM05D007716 ORTHO05D009780 1.8e-12 76.6 87 43.7
Aa31LG1G17430 Aethionema arabicum HOM05D007716 ORTHO05D009780 2.3e-12 76.3 94 35.1
BcaC01g02685 Brassica carinata HOM05D007716 ORTHO05D009780 2.3e-12 76.3 94 37.2
CANSAT54G1223 Cannabis sativa HOM05D007716 ORTHO05D009780 2.3e-12 76.3 143 33.6
AT5G64480 Arabidopsis thaliana HOM05D007716 ORTHO05D009780 3.1e-12 75.9 94 38.3
C03p61760 Brassica napus HOM05D007716 ORTHO05D009780 3.1e-12 75.9 94 37.2
BolC3t18437H Brassica oleracea HOM05D007716 ORTHO05D009780 3.1e-12 75.9 94 37.2
SalBow6G6774 Salvia bowleyana HOM05D007716 ORTHO05D009780 4.0e-12 75.5 132 34.8
AL8G41850 Arabidopsis lyrata HOM05D007716 ORTHO05D009780 5.2e-12 75.1 94 37.2
CsaV3_4G014630 Cucumis sativus L. HOM05D007716 ORTHO05D009780 5.2e-12 75.1 118 37.3
Lalb_Chr20g0122741 Lupinus albus HOM05D007716 ORTHO05D009780 6.8e-12 74.7 132 34.8
MD10G1057800 Malus domestica HOM05D007716 ORTHO05D009780 1.2e-11 73.9 87 39.1
Sp2g27560 Schrenkiella parvula HOM05D007716 ORTHO05D009780 2.0e-11 73.2 94 34.0
Thhalv10004965m.g Eutrema salsugineum HOM05D007716 ORTHO05D009780 2.6e-11 72.8 150 31.3
AUR62027073 Chenopodium quinoa HOM05D007716 ORTHO05D009780 9.9e-11 70.9 130 30.0
AUR62043644 Chenopodium quinoa HOM05D007716 ORTHO05D009780 9.9e-11 70.9 130 30.0
Medtr2g010200 Medicago truncatula HOM05D007716 ORTHO05D009780 9.9e-11 70.9 132 33.3
CDE04G3440 Ceratophyllum demersum HOM05D000620 ORTHO05D000537 3.8e-10 68.9 86 39.5
Peaxi162Scf00299g00025 Petunia axillaris HOM05D007716 ORTHO05D009780 1.4e-09 67.0 63 42.9
Psat1g212560 Pisum sativum HOM05D007716 ORTHO05D009780 1.4e-09 67.0 132 31.1
Dinv08960 Davidia involucrata HOM05D007716 ORTHO05D009780 9.2e-09 64.3 68 42.6
ATR0767G063 Amborella trichopoda HOM05D007716 ORTHO05D009780 7.8e-08 61.2 99 33.3
Lj9P341T42 Lonicera japonica HOM05D007716 ORTHO05D009780 3.3e-06 55.8 62 35.5


User provided reference genes

Program Settings