Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Eucgr.I02515 Eucalyptus grandis HOM05D006483 ORTHO05D007837 2.3e-237 825.1 396 100.0
PGR142G2962 Punica granatum HOM05D006483 ORTHO05D007837 3.0e-184 648.7 383 80.2
VMungo0540G0518 Vigna mungo HOM05D006483 ORTHO05D007837 9.5e-183 643.7 386 76.9
Glyma.15G061600 Glycine max HOM05D006483 ORTHO05D007837 1.6e-182 642.9 354 82.5
Phvul.006G198100 Phaseolus vulgaris HOM05D006483 ORTHO05D007837 6.2e-182 641.0 387 77.3
Sabra16G0180000 Salix brachista HOM05D006483 ORTHO05D007837 1.1e-181 640.2 387 79.8
Duzib132G0719 Durio zibethinus HOM05D006483 ORTHO05D007837 4.0e-181 638.3 371 80.3
CiPaw.06G161800 Carya illinoinensis HOM05D006483 ORTHO05D007837 1.1e-178 630.2 384 77.3
Gorai.008G043200 Gossypium raimondii HOM05D006483 ORTHO05D007837 1.1e-178 630.2 361 80.1
Gohir.D12G041300 Gossypium hirsutum HOM05D006483 ORTHO05D007837 1.4e-178 629.8 360 80.3
GSVIVG01036968001 Vitis vinifera HOM05D006483 ORTHO05D007837 2.4e-178 629.0 348 82.2
Dinv09500 Davidia involucrata HOM05D006483 ORTHO05D007837 3.2e-178 628.6 326 87.1
Gohir.A12G031000 Gossypium hirsutum HOM05D006483 ORTHO05D007837 4.1e-178 628.2 360 80.0
Manes.07G049300 Manihot esculenta HOM05D006483 ORTHO05D007837 4.1e-178 628.2 382 80.1
Potri.001G287700 Populus trichocarpa HOM05D006483 ORTHO05D007837 4.1e-178 628.2 384 78.9
Lj1g0015418 Lotus japonicus HOM05D006483 ORTHO05D007837 7.1e-178 627.5 386 76.7
Ciclev10030436m.g Citrus clementina HOM05D006483 ORTHO05D007837 9.2e-178 627.1 390 75.1
Ca_00195_v3 Cicer arietinum L. HOM05D006483 ORTHO05D007837 1.6e-177 626.3 356 81.2
Psat1g212200 Pisum sativum HOM05D006483 ORTHO05D007837 1.6e-177 626.3 338 83.7
QL11p027690 Quercus lobata HOM05D006483 ORTHO05D007837 2.1e-177 625.9 364 79.9
Atru.chr5.2145 Acer truncatum HOM05D006483 ORTHO05D007837 2.7e-177 625.5 374 79.1
Cpa.g.sc20.69 Carica papaya HOM05D006483 ORTHO05D007837 6.0e-177 624.4 368 78.8
Thecc.02G034600 Theobroma cacao HOM05D006483 ORTHO05D007837 7.8e-177 624.0 358 80.7
arahy.Tifrunner.gnm1.ann1.SKNB9F Arachis hypogaea HOM05D006483 ORTHO05D007837 1.0e-176 623.6 401 74.3
Lalb_Chr15g0090221 Lupinus albus HOM05D006483 ORTHO05D007837 1.7e-176 622.9 328 84.1
Medtr2g010480 Medicago truncatula HOM05D006483 ORTHO05D007837 1.7e-176 622.9 326 86.2
Duzib248G0339 Durio zibethinus HOM05D006483 ORTHO05D007837 3.0e-176 622.1 325 87.7
CiPaw.05G024900 Carya illinoinensis HOM05D006483 ORTHO05D007837 1.9e-175 619.4 325 86.8
Nn6g34537 Nelumbo nucifera HOM05D006483 ORTHO05D007837 1.9e-175 619.4 394 73.9
CANSAT25G2975 Cannabis sativa HOM05D006483 ORTHO05D007837 2.5e-175 619.0 325 86.8
Cfa004758 Carpinus fangiana HOM05D006483 ORTHO05D007837 2.5e-175 619.0 386 76.4
ClCG10G009710 Citrullus lanatus HOM05D006483 ORTHO05D007837 2.5e-175 619.0 395 75.2
Sc14g0002760 Simmondsia chinensis HOM05D006483 ORTHO05D007837 5.6e-175 617.8 392 74.7
TWI59G1265 Tripterygium wilfordii HOM05D006483 ORTHO05D007837 9.6e-175 617.1 364 79.9
Lsat_1_v5_gn_5_110541 Lactuca sativa HOM05D006483 ORTHO05D007837 1.6e-174 616.3 360 79.2
Cc02_g20380 Coffea canephora HOM05D006483 ORTHO05D007837 2.1e-174 615.9 374 77.5
CsaV3_4G014600 Cucumis sativus L. HOM05D006483 ORTHO05D007837 6.2e-174 614.4 367 77.9
vmacro01915 Vaccinium macrocarpon HOM05D006483 ORTHO05D007837 6.2e-174 614.4 394 74.4
COL.COLO4_17833 Corchorus olitorius HOM05D006483 ORTHO05D007837 2.4e-173 612.5 347 82.4
Rhsim11G0146300 Rhododendron simsii HOM05D006483 ORTHO05D007837 3.1e-173 612.1 359 78.8
HanXRQChr10g0297661 Helianthus annuus HOM05D006483 ORTHO05D007837 6.9e-173 610.9 358 78.2
Sed0015964 Sechium edule HOM05D006483 ORTHO05D007837 6.9e-173 610.9 377 75.6
MD10G1115000 Malus domestica HOM05D006483 ORTHO05D007837 2.0e-172 609.4 351 80.6
ECA234G3552 Erigeron canadensis HOM05D006483 ORTHO05D007837 3.4e-172 608.6 317 85.5
Prupe.8G157100 Prunus persica HOM05D006483 ORTHO05D007837 2.2e-171 605.9 382 75.9
Aqoxy6G02925 Aquilegia oxysepala HOM05D006483 ORTHO05D007837 4.9e-171 604.7 328 84.1
Solyc11g044310.2 Solanum lycopersicum HOM05D006483 ORTHO05D007837 8.4e-171 604.0 381 75.1
TAR376G0523 Trochodendron aralioides HOM05D006483 ORTHO05D007837 8.4e-171 604.0 368 76.6
RcHm_v2.0_Chr6g0246361 Rosa chinensis HOM05D006483 ORTHO05D007837 1.9e-170 602.8 373 76.4
Sopen11g019810 Solanum pennellii HOM05D006483 ORTHO05D007837 2.4e-170 602.4 381 74.8
FAN24G1160 Fragaria x ananassa HOM05D006483 ORTHO05D007837 7.1e-170 600.9 380 75.0
FAN20G1555 Fragaria x ananassa HOM05D006483 ORTHO05D007837 9.3e-170 600.5 391 73.4
PSO541G5548 Papaver somniferum HOM05D006483 ORTHO05D007837 9.3e-170 600.5 323 82.7
EL10Ac9g22152 Beta vulgaris HOM05D006483 ORTHO05D007837 4.6e-169 598.2 322 84.2
THA.LOC104819515 Tarenaya hassleriana HOM05D006483 ORTHO05D007837 1.7e-168 596.3 352 78.4
Carub.0003s2843 Capsella rubella HOM05D006483 ORTHO05D007837 2.3e-168 595.9 316 84.5
FvH4_2g02550 Fragaria vesca HOM05D006483 ORTHO05D007837 2.3e-168 595.9 380 74.5
FAN15G2441 Fragaria x ananassa HOM05D006483 ORTHO05D007837 3.0e-168 595.5 325 83.4
Aa31LG8G12670 Aethionema arabicum HOM05D006483 ORTHO05D007837 1.1e-167 593.6 369 75.9
PSO675G7999 Papaver somniferum HOM05D006483 ORTHO05D007837 1.1e-167 593.6 323 81.7
CAN.G475.27 Capsicum annuum HOM05D006483 ORTHO05D007837 1.5e-167 593.2 351 78.1
CARHR105280 Cardamine hirsuta HOM05D006483 ORTHO05D007837 1.6e-166 589.7 315 84.8
Peaxi162Scf00152g00613 Petunia axillaris HOM05D006483 ORTHO05D007837 3.6e-166 588.6 349 77.7
Thhalv10022723m.g Eutrema salsugineum HOM05D006483 ORTHO05D007837 1.4e-165 586.6 384 72.9
CSS0046506 Camellia sinensis var. sinensis HOM05D006483 ORTHO05D007837 1.8e-165 586.3 352 78.1
SalBow6G1047 Salvia bowleyana HOM05D006483 ORTHO05D007837 3.1e-165 585.5 377 72.9
Sp3g27660 Schrenkiella parvula HOM05D006483 ORTHO05D007837 6.9e-165 584.3 379 73.9
AL3G45940 Arabidopsis lyrata HOM05D006483 ORTHO05D007837 1.5e-164 583.2 325 82.2
ATR0739G015 Amborella trichopoda HOM05D006483 ORTHO05D007837 2.6e-164 582.4 387 72.6
FAN27G0654 Fragaria x ananassa HOM05D006483 ORTHO05D007837 3.4e-164 582.0 404 70.5
BolC3t17891H Brassica oleracea HOM05D006483 ORTHO05D007837 2.2e-163 579.3 315 82.5
BcaC01g03099 Brassica carinata HOM05D006483 ORTHO05D007837 3.8e-163 578.6 315 82.5
AT2G14260 Arabidopsis thaliana HOM05D006483 ORTHO05D007837 1.1e-162 577.0 326 82.5
A03p45170 Brassica napus HOM05D006483 ORTHO05D007837 1.1e-162 577.0 341 78.0
BraA03t13652Z Brassica rapa HOM05D006483 ORTHO05D007837 1.1e-162 577.0 341 78.0
DCAR_029840 Daucus carota HOM05D006483 ORTHO05D007837 1.1e-162 577.0 323 79.9
BcaB08g34553 Brassica carinata HOM05D006483 ORTHO05D007837 4.2e-162 575.1 383 72.3
Migut.B00501 Erythranthe guttata HOM05D006483 ORTHO05D007837 4.2e-162 575.1 375 70.7
Lj5C223T22 Lonicera japonica HOM05D006483 ORTHO05D007837 2.1e-161 572.8 373 74.3
C03p56040 Brassica napus HOM05D006483 ORTHO05D007837 9.6e-159 563.9 344 75.6
unitig_21.g20708 Utricularia gibba HOM05D006483 ORTHO05D007837 9.6e-159 563.9 320 77.5
arahy.Tifrunner.gnm1.ann1.AKE21I Arachis hypogaea HOM05D006483 ORTHO05D007837 8.1e-158 560.8 403 69.0
CSS0033600 Camellia sinensis var. sinensis HOM05D006483 ORTHO05D007837 3.1e-157 558.9 356 75.3
MELO3C018038.2 Cucumis melo HOM05D006483 ORTHO05D007837 1.2e-156 557.0 360 74.7
TAR628G0755 Trochodendron aralioides HOM05D006483 ORTHO05D007837 3.4e-156 555.4 293 83.6
HPP92_006303 Vanilla planifolia HOM05D006483 ORTHO05D007837 4.5e-156 555.1 326 76.7
SGA_v2.0_scaffold342G49421 Striga asiatica HOM05D006483 ORTHO05D007837 6.4e-155 551.2 379 69.1
MSTRG.16655 Avicennia marina HOM05D006483 ORTHO05D007837 4.0e-149 531.9 285 82.1
CDE02G1970 Ceratophyllum demersum HOM05D006483 ORTHO05D007837 1.5e-148 530.0 345 71.0
Pp3c4_27270 Physcomitrium patens HOM05D006483 ORTHO05D007837 3.9e-144 515.4 317 71.3
SMO145G0068 Selaginella moellendorffii HOM05D006483 ORTHO05D007837 5.1e-144 515.0 311 73.6
AUR62027055 Chenopodium quinoa HOM05D006483 ORTHO05D007837 4.3e-143 511.9 319 74.3
Zm00001eb292750 Zea mays HOM05D006483 ORTHO05D007837 4.3e-143 511.9 284 79.2
Mapoly0001s0344 Marchantia polymorpha HOM05D006483 ORTHO05D007837 2.2e-142 509.6 379 63.6
AagrBONN_evm.TU.Sc2ySwM_344.4362 Anthoceros agrestis HOM05D006483 ORTHO05D007837 9.0e-141 504.2 324 68.2
Haze_10356 Corylus avellana HOM05D006483 ORTHO05D007837 1.6e-137 493.4 608 46.9
CBR_g8564 Chara braunii HOM05D006483 ORTHO05D007837 1.8e-128 463.4 328 64.6
Os05g0513900 Oryza sativa ssp. japonica HOM05D006483 ORTHO05D007837 2.9e-123 446.0 245 80.4
Ah.01g024350 Amaranthus hybridus HOM05D006483 ORTHO05D007837 2.7e-105 386.3 270 69.6
AUR62030898 Chenopodium quinoa HOM05D006483 ORTHO05D007837 1.8e-101 373.6 278 64.7
Actinidia00335 Actinidia chinensis HOM05D006483 ORTHO05D007837 4.1e-101 372.5 227 77.1
Nitab4.5_0007517g0010 Nicotiana tabacum HOM05D006483 ORTHO05D007837 3.8e-99 365.9 226 73.9
Mapoly0142s0028 Marchantia polymorpha HOM05D006483 ORTHO05D007837 1.3e-91 340.9 372 44.6
AagrBONN_evm.TU.Sc2ySwM_344.1401 Anthoceros agrestis HOM05D006483 ORTHO05D007837 2.4e-85 320.1 382 43.2
SMO353G0285 Selaginella moellendorffii HOM05D006483 ORTHO05D007837 1.3e-83 314.3 314 47.5
SMO364G0301 Selaginella moellendorffii HOM05D006483 ORTHO05D007837 5.0e-83 312.4 313 47.0
MBI16_g27214_MAGBIO Magnolia biondii HOM05D006483 ORTHO05D007837 3.3e-74 283.1 166 78.9
SEGI_12853 Sequoiadendron giganteum HOM05D006483 ORTHO05D007837 1.6e-57 227.6 126 79.4
Zm00001eb142680 Zea mays HOM05D006483 ORTHO05D007837 1.4e-56 224.6 186 56.5
MBI16_g41225_MAGBIO Magnolia biondii HOM05D006483 ORTHO05D007837 1.2e-55 221.5 163 65.6
PRCOL_00002897 Prasinoderma coloniale HOM05D006483 ORTHO05D007837 7.6e-55 218.8 337 38.6
EL10Ac8g19599 Beta vulgaris HOM05D006483 ORTHO05D007837 7.3e-50 202.2 129 72.9
MD05G1112500 Malus domestica HOM05D006483 ORTHO05D007837 1.5e-47 194.5 204 51.5
Cre08.g375600 Chlamydomonas reinhardtii HOM05D006483 ORTHO05D007837 4.5e-47 193.0 197 46.7
Oeu007495.1 Olea europaea HOM05D006483 ORTHO05D007837 6.0e-36 156.0 85 80.0
MD05G1112400 Malus domestica HOM05D006483 ORTHO05D007837 9.0e-24 115.5 71 70.4
SEGI_05070 Sequoiadendron giganteum HOM05D006483 ORTHO05D007837 1.8e-16 91.3 79 53.2
TPR.G27616 Trifolium pratense HOM05D006483 ORTHO05D007837 7.2e-13 79.3 39 82.1
arahy.Tifrunner.gnm1.ann1.W5BQ9H Arachis hypogaea HOM05D006483 ORTHO05D000252 3.9e-11 73.6 62 58.1
Cfa023956 Carpinus fangiana HOM05D026080 ORTHO05D034125 3.1e-08 63.9 116 33.6
Sed0004450 Sechium edule HOM05D000363 ORTHO05D000236 4.1e-08 63.5 129 32.6
SEGI_04316 Sequoiadendron giganteum HOM05D006483 ORTHO05D007837 4.1e-08 63.5 34 79.4
Cpa.g.sc1028.5 Carica papaya HOM05D000363 ORTHO05D000236 1.3e-06 58.5 151 29.8
ClCG01G022790 Citrullus lanatus HOM05D000363 ORTHO05D000236 2.2e-06 57.8 100 33.0
Zm00001eb049690 Zea mays HOM05D003600 ORTHO05D004129 2.2e-06 57.8 35 62.9
Hma1.2p1_0200F.1_g086050 Hydrangea macrophylla HOM05D006483 ORTHO05D007837 3.8e-06 57.0 68 44.1


User provided reference genes

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