Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Eucgr.I02512 Eucalyptus grandis HOM05D003513 ORTHO05D004660 3.7e-108 395.2 210 100.0
Eucgr.L02047 Eucalyptus grandis HOM05D003513 ORTHO05D004660 9.6e-72 274.2 145 100.0
TWI14G0477 Tripterygium wilfordii HOM05D003513 ORTHO05D004660 1.9e-59 233.4 211 61.6
PGR042G0778 Punica granatum HOM05D003513 ORTHO05D004660 9.3e-59 231.1 212 62.3
vmacro01922 Vaccinium macrocarpon HOM05D003513 ORTHO05D004660 1.2e-58 230.7 216 63.0
Atru.chr4.2879 Acer truncatum HOM05D003513 ORTHO05D004660 2.3e-57 226.5 214 61.2
COL.COLO4_17824 Corchorus olitorius HOM05D003513 ORTHO05D004660 8.7e-57 224.6 204 64.7
Prupe.8G155900 Prunus persica HOM05D003513 ORTHO05D004660 8.7e-57 224.6 196 66.3
Duzib052G1139 Durio zibethinus HOM05D003513 ORTHO05D004660 9.6e-56 221.1 204 63.2
MD05G1110900 Malus domestica HOM05D003513 ORTHO05D004660 2.1e-55 219.9 212 60.8
Thecc.02G033900 Theobroma cacao HOM05D003513 ORTHO05D004660 2.1e-55 219.9 201 63.2
CSS0016653 Camellia sinensis var. sinensis HOM05D003513 ORTHO05D004660 3.7e-55 219.2 217 60.4
Duzib248G1448 Durio zibethinus HOM05D003513 ORTHO05D004660 6.3e-55 218.4 211 60.7
Sabra09G0063800 Salix brachista HOM05D003513 ORTHO05D004660 8.2e-55 218.0 208 57.7
Gohir.A03G213100 Gossypium hirsutum HOM05D003513 ORTHO05D004660 1.8e-54 216.9 202 63.4
Cfa003376 Carpinus fangiana HOM05D003513 ORTHO05D004660 2.4e-54 216.5 211 61.1
Gohir.D02G234600 Gossypium hirsutum HOM05D003513 ORTHO05D004660 2.4e-54 216.5 202 63.9
Manes.07G049900 Manihot esculenta HOM05D003513 ORTHO05D004660 2.4e-54 216.5 207 60.9
Rhsim11G0147300 Rhododendron simsii HOM05D003513 ORTHO05D004660 3.1e-54 216.1 236 56.4
TWI23G0398 Tripterygium wilfordii HOM05D003513 ORTHO05D004660 3.1e-54 216.1 211 59.2
GSVIVG01036987001 Vitis vinifera HOM05D003513 ORTHO05D004660 3.1e-54 216.1 216 62.0
Cfa004752 Carpinus fangiana HOM05D003513 ORTHO05D004660 5.3e-54 215.3 212 61.8
Potri.009G082200 Populus trichocarpa HOM05D003513 ORTHO05D004660 5.3e-54 215.3 208 58.7
Gorai.005G262600 Gossypium raimondii HOM05D003513 ORTHO05D004660 9.0e-54 214.5 205 62.9
Hma1.2p1_0661F.1_g197860 Hydrangea macrophylla HOM05D003513 ORTHO05D004660 9.0e-54 214.5 213 59.2
RcHm_v2.0_Chr6g0247131 Rosa chinensis HOM05D003513 ORTHO05D004660 1.2e-53 214.2 206 61.2
Actinidia02426 Actinidia chinensis HOM05D003513 ORTHO05D004660 2.6e-53 213.0 213 60.6
Oeu010478.1 Olea europaea HOM05D003513 ORTHO05D004660 4.5e-53 212.2 214 58.4
CANSAT11G1387 Cannabis sativa HOM05D003513 ORTHO05D004660 1.3e-52 210.7 208 59.1
FAN20G2897 Fragaria x ananassa HOM05D003513 ORTHO05D004660 1.3e-52 210.7 206 59.7
Dinv17746 Davidia involucrata HOM05D003513 ORTHO05D004660 2.9e-52 209.5 202 59.9
MELO3C013317.2 Cucumis melo HOM05D003513 ORTHO05D004660 3.8e-52 209.1 209 58.9
Actinidia00338 Actinidia chinensis HOM05D003513 ORTHO05D004660 5.0e-52 208.8 212 63.7
Medtr2g010510 Medicago truncatula HOM05D003513 ORTHO05D004660 5.0e-52 208.8 206 59.7
FAN15G2646 Fragaria x ananassa HOM05D003513 ORTHO05D004660 6.5e-52 208.4 206 59.2
FAN24G3528 Fragaria x ananassa HOM05D003513 ORTHO05D004660 2.5e-51 206.5 206 59.2
CsaV3_7G001360 Cucumis sativus L. HOM05D003513 ORTHO05D004660 3.2e-51 206.1 208 61.5
ClCG02G003790 Citrullus lanatus HOM05D003513 ORTHO05D004660 4.2e-51 205.7 208 60.1
FvH4_2g02710 Fragaria vesca HOM05D003513 ORTHO05D004660 2.1e-50 203.4 206 59.2
Peaxi162Scf00016g03328 Petunia axillaris HOM05D003513 ORTHO05D004660 2.1e-50 203.4 217 57.6
Ca_00197_v3 Cicer arietinum L. HOM05D000871 ORTHO05D000770 3.6e-50 202.6 203 60.1
MSTRG.8971 Avicennia marina HOM05D003513 ORTHO05D004660 6.1e-50 201.8 204 59.3
Lalb_Chr18g0060191 Lupinus albus HOM05D003513 ORTHO05D004660 6.1e-50 201.8 258 48.1
Lj9A339T51 Lonicera japonica HOM05D003513 ORTHO05D004660 7.9e-50 201.4 215 58.6
SalBow6G6243 Salvia bowleyana HOM05D003513 ORTHO05D004660 1.3e-49 200.7 205 58.5
Ciclev10028868m.g Citrus clementina HOM05D003513 ORTHO05D004660 2.3e-49 199.9 206 58.3
FAN27G0638 Fragaria x ananassa HOM05D003513 ORTHO05D004660 2.3e-49 199.9 206 56.8
Sopen01g048910 Solanum pennellii HOM05D003513 ORTHO05D004660 2.3e-49 199.9 213 57.7
TAR375G0591 Trochodendron aralioides HOM05D003513 ORTHO05D004660 3.0e-49 199.5 214 57.9
Solyc01g106560.4 Solanum lycopersicum HOM05D003513 ORTHO05D004660 3.9e-49 199.1 213 57.7
arahy.Tifrunner.gnm1.ann1.SQB86K Arachis hypogaea HOM05D003513 ORTHO05D004660 5.1e-49 198.7 242 50.8
Sed0007617 Sechium edule HOM05D003513 ORTHO05D004660 5.1e-49 198.7 200 58.5
arahy.Tifrunner.gnm1.ann1.K4QFJX Arachis hypogaea HOM05D003513 ORTHO05D004660 6.7e-49 198.4 242 50.8
arahy.Tifrunner.gnm1.ann1.2E8PRH Arachis hypogaea HOM05D003513 ORTHO05D004660 8.7e-49 198.0 242 50.4
EL10Ac4g09206 Beta vulgaris HOM05D003513 ORTHO05D004660 8.7e-49 198.0 226 54.9
PGSC0003DMG400005104 Solanum tuberosum HOM05D003513 ORTHO05D004660 1.5e-48 197.2 213 56.8
Glyma.15G062000 Glycine max HOM05D003513 ORTHO05D004660 1.9e-48 196.8 256 50.4
QL11p027784 Quercus lobata HOM05D003513 ORTHO05D004660 2.5e-48 196.4 216 58.3
Oeu059873.1 Olea europaea HOM05D003513 ORTHO05D004660 4.3e-48 195.7 213 54.5
Potri.001G287900 Populus trichocarpa HOM05D003513 ORTHO05D004660 4.3e-48 195.7 195 57.4
MSTRG.8970 Avicennia marina HOM05D003513 ORTHO05D004660 7.4e-48 194.9 204 57.4
Lj6g0027000 Lotus japonicus HOM05D003513 ORTHO05D004660 6.3e-47 191.8 247 49.0
SGA_v2.0_scaffold32G12967 Striga asiatica HOM05D003513 ORTHO05D004660 6.3e-47 191.8 214 55.1
VMungo0540G2261 Vigna mungo HOM05D003513 ORTHO05D004660 6.3e-47 191.8 250 50.8
Psat1g212080 Pisum sativum HOM05D003513 ORTHO05D004660 1.1e-46 191.0 191 61.3
Aa31LG8G12720 Aethionema arabicum HOM05D003513 ORTHO05D004660 1.8e-46 190.3 216 53.7
Cc02_g20350 Coffea canephora HOM05D003513 ORTHO05D004660 1.8e-46 190.3 214 56.5
CiPaw.16G055200 Carya illinoinensis HOM05D003513 ORTHO05D004660 2.4e-46 189.9 208 57.2
PSO384G0236 Papaver somniferum HOM05D003513 ORTHO05D004660 5.3e-46 188.7 212 54.2
Glyma.13G253000 Glycine max HOM05D003513 ORTHO05D004660 1.5e-45 187.2 254 48.4
THA.LOC104807196 Tarenaya hassleriana HOM05D003513 ORTHO05D004660 3.4e-45 186.0 197 58.4
Nn4g22684 Nelumbo nucifera HOM05D003513 ORTHO05D004660 4.5e-45 185.7 170 61.8
MD10G1114400 Malus domestica HOM05D003513 ORTHO05D004660 7.7e-45 184.9 183 60.1
Sp3g05980 Schrenkiella parvula HOM05D003513 ORTHO05D004660 1.3e-44 184.1 211 54.5
Lj1g0004946 Lotus japonicus HOM05D003513 ORTHO05D004660 1.7e-44 183.7 207 55.1
PSO339G4304 Papaver somniferum HOM05D003513 ORTHO05D004660 2.9e-44 183.0 209 54.1
AL3G45960 Arabidopsis lyrata HOM05D003513 ORTHO05D004660 5.0e-44 182.2 210 54.8
unitig_0.g631 Utricularia gibba HOM05D003513 ORTHO05D004660 1.1e-43 181.0 205 56.1
MBI18_g04900_MAGBIO Magnolia biondii HOM05D003513 ORTHO05D004660 1.9e-43 180.3 212 54.2
Lj6g0027758 Lotus japonicus HOM05D003513 ORTHO05D004660 3.2e-43 179.5 278 44.6
Atru.chr5.2163 Acer truncatum HOM05D003513 ORTHO05D004660 2.7e-42 176.4 149 67.1
arahy.Tifrunner.gnm1.ann1.C4ZNB5 Arachis hypogaea HOM05D003513 ORTHO05D004660 2.7e-42 176.4 247 46.2
Lsat_1_v5_gn_7_84220 Lactuca sativa HOM05D003513 ORTHO05D004660 4.6e-42 175.6 209 51.7
ECA236G2279 Erigeron canadensis HOM05D003513 ORTHO05D004660 6.1e-42 175.3 210 54.3
CiPaw.05G024600 Carya illinoinensis HOM05D003513 ORTHO05D004660 7.9e-42 174.9 206 54.9
DCAR_029853 Daucus carota HOM05D003513 ORTHO05D004660 1.0e-41 174.5 241 49.4
SHI04900 Sapria himalayana HOM05D003513 ORTHO05D004660 3.9e-41 172.6 194 53.6
Os07g0213400 Oryza sativa ssp. japonica HOM05D003513 ORTHO05D004660 8.8e-41 171.4 210 51.0
AL7G17790 Arabidopsis lyrata HOM05D003513 ORTHO05D004660 1.5e-40 170.6 215 50.7
MBI18_g12443_MAGBIO Magnolia biondii HOM05D003513 ORTHO05D004660 1.5e-40 170.6 209 52.6
C03p42610 Brassica napus HOM05D003513 ORTHO05D004660 3.3e-40 169.5 212 50.0
Sabra16G0180200 Salix brachista HOM05D003513 ORTHO05D004660 7.4e-40 168.3 232 47.0
Carub.0003s2847 Capsella rubella HOM05D003513 ORTHO05D004660 1.7e-39 167.2 200 52.0
Cpa.g.sc20.72 Carica papaya HOM05D003513 ORTHO05D004660 2.8e-39 166.4 149 63.1
C01p05020 Brassica napus HOM05D003513 ORTHO05D004660 6.3e-39 165.2 216 50.0
Sp7g31420 Schrenkiella parvula HOM05D003513 ORTHO05D004660 6.3e-39 165.2 212 50.0
Zm00001eb325060 Zea mays HOM05D003513 ORTHO05D004660 1.1e-38 164.5 214 48.1
Dinv03362 Davidia involucrata HOM05D003513 ORTHO05D004660 1.4e-38 164.1 149 62.4
BcaC09g52179 Brassica carinata HOM05D003513 ORTHO05D004660 1.8e-38 163.7 218 49.5
BolC1t00484H Brassica oleracea HOM05D003513 ORTHO05D004660 1.8e-38 163.7 218 49.5
Aqoxy5G03939 Aquilegia oxysepala HOM05D003513 ORTHO05D004660 5.3e-38 162.2 211 53.1
BraA01t00446Z Brassica rapa HOM05D003513 ORTHO05D004660 7.7e-37 158.3 195 53.3
A03p35030 Brassica napus HOM05D003513 ORTHO05D004660 1.0e-36 157.9 212 47.6
BraA03t12683Z Brassica rapa HOM05D003513 ORTHO05D004660 1.0e-36 157.9 212 48.1
BolC3t16531H Brassica oleracea HOM05D003513 ORTHO05D004660 8.5e-36 154.8 214 47.2
AUR62005013 Chenopodium quinoa HOM05D003513 ORTHO05D004660 1.4e-35 154.1 211 48.8
AT4G33690 Arabidopsis thaliana HOM05D003513 ORTHO05D004660 2.5e-35 153.3 192 51.0
BcaB07g32937 Brassica carinata HOM05D003513 ORTHO05D004660 2.5e-35 153.3 171 55.0
CDE04G2077 Ceratophyllum demersum HOM05D000016 ORTHO05D000538 3.2e-35 152.9 191 48.2
ATR0681G195 Amborella trichopoda HOM05D003513 ORTHO05D004660 4.2e-35 152.5 260 46.2
HanXRQChr17g0550541 Helianthus annuus HOM05D003513 ORTHO05D004660 5.5e-35 152.1 200 51.0
HPP92_011751 Vanilla planifolia HOM05D003513 ORTHO05D004660 2.1e-34 150.2 226 45.1
CDE07G1727 Ceratophyllum demersum HOM05D003513 ORTHO05D004660 2.3e-33 146.7 229 45.0
A01p04630 Brassica napus HOM05D003513 ORTHO05D004660 2.6e-32 143.3 196 51.0
AUR62000955 Chenopodium quinoa HOM05D003513 ORTHO05D004660 1.3e-31 141.0 209 44.5
Mapoly0037s0029 Marchantia polymorpha HOM05D003513 ORTHO05D004660 2.8e-31 139.8 189 47.1
SEGI_16177 Sequoiadendron giganteum HOM05D003513 ORTHO05D004660 6.3e-31 138.7 241 44.0
Nitab4.5_0001477g0150 Nicotiana tabacum HOM05D003513 ORTHO05D004660 8.2e-31 138.3 213 46.9
Carub.0007s0673 Capsella rubella HOM05D003513 ORTHO05D004660 1.8e-30 137.1 152 55.9
HPP92_025257 Vanilla planifolia HOM05D003513 ORTHO05D004660 1.2e-29 134.4 193 44.6
BraA01t02793Z Brassica rapa HOM05D004336 ORTHO05D004660 2.0e-29 133.7 196 51.0
SMO119G0189 Selaginella moellendorffii HOM05D003513 ORTHO05D004660 5.0e-28 129.0 167 44.9
Hund24144 Selenicereus undatus HOM05D003513 ORTHO05D004660 5.0e-28 129.0 151 53.0
AagrBONN_evm.TU.Sc2ySwM_289.2 Anthoceros agrestis HOM05D003513 ORTHO05D004660 1.2e-26 124.4 194 41.2
AagrBONN_evm.TU.Sc2ySwM_362.2667 Anthoceros agrestis HOM05D003513 ORTHO05D004660 1.2e-26 124.4 194 41.2
Sc21g0000900 Simmondsia chinensis HOM05D003513 ORTHO05D004660 2.1e-26 123.6 152 53.3
Pp3c17_21630 Physcomitrium patens HOM05D003513 ORTHO05D004660 3.6e-26 122.9 211 41.2
SEGI_38183 Sequoiadendron giganteum HOM05D003513 ORTHO05D004660 1.0e-25 121.3 232 43.5
BcaC04g20358 Brassica carinata HOM05D003513 ORTHO05D004660 4.0e-25 119.4 202 40.6
Nitab4.5_0007763g0010 Nicotiana tabacum HOM05D003513 ORTHO05D004660 1.7e-23 114.0 157 47.8
A05p21550 Brassica napus HOM05D003513 ORTHO05D004660 6.3e-23 112.1 184 42.9
BraA05t21075Z Brassica rapa HOM05D003513 ORTHO05D004660 6.3e-23 112.1 184 42.9
Migut.B00497 Erythranthe guttata HOM05D003513 ORTHO05D004660 8.2e-23 111.7 145 49.0
TAR629G2534 Trochodendron aralioides HOM05D003513 ORTHO05D004660 8.2e-23 111.7 118 57.6
BcaB04g17698 Brassica carinata HOM05D003513 ORTHO05D004660 1.2e-21 107.8 183 43.7
BcaB02g10961 Brassica carinata HOM05D003513 ORTHO05D004660 2.7e-21 106.7 86 66.3
CAN.G192.6 Capsicum annuum HOM05D003513 ORTHO05D004660 2.7e-21 106.7 160 46.2
Glyma.07G229300 Glycine max HOM05D003513 ORTHO05D004660 1.3e-20 104.4 73 71.2
A09p29610 Brassica napus HOM05D003513 ORTHO05D004660 1.5e-19 100.9 169 43.2
A04p04130 Brassica napus HOM05D003513 ORTHO05D004660 2.5e-19 100.1 171 43.9
TPR.G22787 Trifolium pratense HOM05D003513 ORTHO05D004660 2.5e-19 100.1 134 50.7
BcaC08g44431 Brassica carinata HOM05D003513 ORTHO05D013524 7.2e-19 98.6 184 39.7
CARHR105270 Cardamine hirsuta HOM05D003513 ORTHO05D004660 1.0e-17 94.7 147 47.6
A08p11320 Brassica napus HOM05D003513 ORTHO05D004660 1.2e-16 91.3 63 73.0
A10p16400 Brassica napus HOM05D003513 ORTHO05D004660 1.2e-16 91.3 63 73.0
C06p15560 Brassica napus HOM05D003513 ORTHO05D004660 1.2e-16 91.3 63 73.0
C08p23080 Brassica napus HOM05D003513 ORTHO05D004660 1.2e-16 91.3 63 73.0
C06p18710 Brassica napus HOM05D003513 ORTHO05D004660 2.6e-16 90.1 58 77.6
Phvul.006G197800 Phaseolus vulgaris HOM05D003513 ORTHO05D004660 2.6e-16 90.1 173 41.6
Thhalv10021452m.g Eutrema salsugineum HOM05D003513 ORTHO05D004660 3.4e-16 89.7 141 42.6
BraA03t15374Z Brassica rapa HOM05D003513 ORTHO05D004660 5.7e-16 89.0 171 40.9
A09p33590 Brassica napus HOM05D003513 ORTHO05D004660 7.5e-16 88.6 56 80.4
A03p66860 Brassica napus HOM05D003513 ORTHO05D004660 9.8e-16 88.2 60 73.3
A03p61430 Brassica napus HOM05D003513 ORTHO05D004660 2.2e-15 87.0 56 78.6
BraA09t38150Z Brassica rapa HOM05D003513 ORTHO05D004660 2.2e-15 87.0 56 78.6
Zm00001eb303370 Zea mays HOM05D003513 ORTHO05D004660 2.8e-15 86.7 149 42.3
BolC8t52234H Brassica oleracea HOM05D003513 ORTHO05D004660 1.2e-13 81.3 171 38.6
TWI59G0638 Tripterygium wilfordii HOM05D003513 ORTHO05D004660 1.0e-12 78.2 85 55.3
C08p46960 Brassica napus HOM05D003513 ORTHO05D013524 1.3e-12 77.8 171 38.0
C01p31670 Brassica napus HOM05D003513 ORTHO05D015800 1.7e-12 77.4 54 72.2
A05p23280 Brassica napus HOM05D003513 ORTHO05D004660 1.2e-10 71.2 46 76.1
BraA05t21192Z Brassica rapa HOM05D003513 ORTHO05D004660 1.2e-10 71.2 46 76.1
Gohir.A01G179633 Gossypium hirsutum HOM05D003513 ORTHO05D004660 2.8e-10 70.1 51 70.6
BcaC06g33105 Brassica carinata HOM05D005554 ORTHO05D021652 2.3e-09 67.0 37 81.1
Gorai.002G212100 Gossypium raimondii HOM05D003513 ORTHO05D004660 6.8e-09 65.5 51 68.6
BcaB05g23799 Brassica carinata HOM05D003513 ORTHO05D004660 1.5e-08 64.3 128 36.7
TAR636G1841 Trochodendron aralioides HOM05D003513 ORTHO05D004660 1.5e-08 64.3 90 46.7
BcaB06g26524 Brassica carinata HOM05D005554 ORTHO05D021652 7.5e-08 62.0 36 77.8
MCO09G316 Micromonas commoda HOM05D003513 ORTHO05D004660 1.8e-06 57.4 177 32.2


User provided reference genes

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