Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Eucgr.I02457 Eucalyptus grandis HOM05D007518 ORTHO05D008168 3.8e-64 248.4 168 100.0
VMungo1215G2461 Vigna mungo HOM05D007518 ORTHO05D008168 3.3e-36 155.6 159 75.5
Haze_15107 Corylus avellana HOM05D007518 ORTHO05D008168 4.8e-35 151.8 168 73.8
Prupe.7G152700 Prunus persica HOM05D007518 ORTHO05D008168 8.2e-35 151.0 168 72.6
Phvul.002G029100 Phaseolus vulgaris HOM05D007518 ORTHO05D008168 1.1e-34 150.6 174 70.7
Lj2g0015504 Lotus japonicus HOM05D007518 ORTHO05D008168 1.4e-34 150.2 136 84.6
Cfa004294 Carpinus fangiana HOM05D007518 ORTHO05D008168 4.1e-34 148.7 168 73.8
PGR119G2546 Punica granatum HOM05D007518 ORTHO05D008168 4.1e-34 148.7 168 70.2
QL06p045656 Quercus lobata HOM05D007518 ORTHO05D008168 1.2e-33 147.1 167 71.3
Glyma.11G067100 Glycine max HOM05D007518 ORTHO05D008168 1.6e-33 146.7 170 72.4
CSS0014655 Camellia sinensis var. sinensis HOM05D007518 ORTHO05D008168 2.0e-33 146.4 168 72.0
Ciclev10026615m.g Citrus clementina HOM05D007518 ORTHO05D008168 2.0e-33 146.4 171 71.3
TAR628G0256 Trochodendron aralioides HOM05D007518 ORTHO05D008168 3.5e-33 145.6 170 71.2
Cfa004293 Carpinus fangiana HOM05D007518 ORTHO05D008168 1.0e-32 144.1 166 72.3
Sabra07G0023900 Salix brachista HOM05D007518 ORTHO05D008168 1.3e-32 143.7 135 83.7
CiPaw.02G016200 Carya illinoinensis HOM05D007518 ORTHO05D008168 1.7e-32 143.3 166 72.3
arahy.Tifrunner.gnm1.ann1.RRU65L Arachis hypogaea HOM05D007518 ORTHO05D008168 2.2e-32 142.9 169 71.0
Gohir.D03G015500 Gossypium hirsutum HOM05D007518 ORTHO05D008168 2.9e-32 142.5 168 71.4
arahy.Tifrunner.gnm1.ann1.5UMV3I Arachis hypogaea HOM05D007518 ORTHO05D008168 3.8e-32 142.1 169 71.0
Gorai.003G015700 Gossypium raimondii HOM05D007518 ORTHO05D008168 3.8e-32 142.1 168 71.4
TWI53G0381 Tripterygium wilfordii HOM05D007518 ORTHO05D008168 6.5e-32 141.4 141 78.0
Thecc.01G037800 Theobroma cacao HOM05D007518 ORTHO05D008168 8.5e-32 141.0 168 71.4
DCAR_021444 Daucus carota HOM05D007518 ORTHO05D008168 1.1e-31 140.6 168 69.0
Gohir.A02G164600 Gossypium hirsutum HOM05D007518 ORTHO05D008168 1.5e-31 140.2 168 71.4
MD02G1150400 Malus domestica HOM05D007518 ORTHO05D008168 1.9e-31 139.8 140 80.7
Potri.007G027400 Populus trichocarpa HOM05D007518 ORTHO05D008168 1.9e-31 139.8 168 68.5
Sed0026205 Sechium edule HOM05D007518 ORTHO05D008168 2.5e-31 139.4 166 70.5
MELO3C007820.2 Cucumis melo HOM05D007518 ORTHO05D008168 5.5e-31 138.3 136 80.1
COL.COLO4_22099 Corchorus olitorius HOM05D007518 ORTHO05D008168 9.4e-31 137.5 168 70.2
CsaV3_6G046170 Cucumis sativus L. HOM05D007518 ORTHO05D008168 9.4e-31 137.5 136 80.1
MD15G1264900 Malus domestica HOM05D007518 ORTHO05D008168 9.4e-31 137.5 172 69.2
RcHm_v2.0_Chr2g0101891 Rosa chinensis HOM05D007518 ORTHO05D008168 9.4e-31 137.5 168 70.8
Ah.03g139360 Amaranthus hybridus HOM05D007518 ORTHO05D008168 1.2e-30 137.1 134 82.8
Nn1g05049 Nelumbo nucifera HOM05D007518 ORTHO05D008168 1.6e-30 136.7 162 71.0
Rhsim10G0067800 Rhododendron simsii HOM05D007518 ORTHO05D008168 1.6e-30 136.7 168 70.2
Atru.chr3.555 Acer truncatum HOM05D007518 ORTHO05D008168 2.1e-30 136.3 167 69.5
CANSAT01G2215 Cannabis sativa HOM05D007518 ORTHO05D008168 4.7e-30 135.2 169 69.8
FAN28G1656 Fragaria x ananassa HOM05D007518 ORTHO05D008168 4.7e-30 135.2 168 70.2
Cc07_g09360 Coffea canephora HOM05D007518 ORTHO05D008168 6.1e-30 134.8 156 71.8
Lalb_Chr09g0322501 Lupinus albus HOM05D007518 ORTHO05D008168 8.0e-30 134.4 134 78.4
TPR.G28676 Trifolium pratense HOM05D007518 ORTHO05D008168 8.0e-30 134.4 133 81.2
FvH4_1g13510 Fragaria vesca HOM05D007518 ORTHO05D008168 1.0e-29 134.0 168 70.2
FAN19G2612 Fragaria x ananassa HOM05D007518 ORTHO05D008168 1.0e-29 134.0 168 70.2
Medtr5g019920 Medicago truncatula HOM05D007518 ORTHO05D008168 1.4e-29 133.7 134 81.3
Thhalv10010782m.g Eutrema salsugineum HOM05D007518 ORTHO05D008168 1.8e-29 133.3 168 70.2
MBI16_g37747_MAGBIO Magnolia biondii HOM05D007518 ORTHO05D008168 1.8e-29 133.3 166 67.5
AUR62003171 Chenopodium quinoa HOM05D007518 ORTHO05D008168 2.3e-29 132.9 166 68.7
Aqoxy6G01075 Aquilegia oxysepala HOM05D007518 ORTHO05D008168 4.0e-29 132.1 167 68.3
Ca_00386_v3 Cicer arietinum L. HOM05D007518 ORTHO05D008168 4.0e-29 132.1 129 66.7
PSO541G1957 Papaver somniferum HOM05D007518 ORTHO05D008168 5.2e-29 131.7 161 69.6
Aa31LG4G18840 Aethionema arabicum HOM05D007518 ORTHO05D008168 1.2e-28 130.6 168 67.9
C05p06340 Brassica napus HOM05D007518 ORTHO05D008168 1.2e-28 130.6 168 69.6
BolC5t29390H Brassica oleracea HOM05D007518 ORTHO05D008168 2.0e-28 129.8 168 69.6
THA.LOC104821280 Tarenaya hassleriana HOM05D007518 ORTHO05D008168 2.0e-28 129.8 170 68.8
PSO675G1394 Papaver somniferum HOM05D007518 ORTHO05D008168 2.6e-28 129.4 161 68.9
Manes.01G134000 Manihot esculenta HOM05D007518 ORTHO05D008168 4.4e-28 128.6 168 66.1
Pp3c15_7720 Physcomitrium patens HOM05D007518 ORTHO05D008168 4.4e-28 128.6 142 69.0
AUR62007988 Chenopodium quinoa HOM05D006571 ORTHO05D007771 7.5e-28 127.9 133 78.2
Sp5g11540 Schrenkiella parvula HOM05D007518 ORTHO05D008168 7.5e-28 127.9 168 69.0
A06p05270 Brassica napus HOM05D007518 ORTHO05D008168 9.8e-28 127.5 168 68.5
BraA06t23735Z Brassica rapa HOM05D007518 ORTHO05D008168 9.8e-28 127.5 168 68.5
Migut.L00282 Erythranthe guttata HOM05D007518 ORTHO05D008168 1.3e-27 127.1 167 66.5
HanXRQChr16g0530261 Helianthus annuus HOM05D007518 ORTHO05D008168 1.7e-27 126.7 134 78.4
AL5G30840 Arabidopsis lyrata HOM05D007518 ORTHO05D008168 2.2e-27 126.3 170 67.6
AT3G50685 Arabidopsis thaliana HOM05D007518 ORTHO05D008168 3.7e-27 125.6 170 67.6
CAN.G1028.6 Capsicum annuum HOM05D007518 ORTHO05D008168 3.7e-27 125.6 165 64.2
Carub.0005s1701 Capsella rubella HOM05D007518 ORTHO05D008168 4.8e-27 125.2 168 68.5
Lj2P450T11 Lonicera japonica HOM05D007518 ORTHO05D008168 8.3e-27 124.4 131 79.4
Solyc03g034070.1 Solanum lycopersicum HOM05D007518 ORTHO05D008168 4.1e-26 122.1 113 85.0
Sopen03g006850 Solanum pennellii HOM05D007518 ORTHO05D008168 4.1e-26 122.1 113 85.0
Mapoly0168s0019 Marchantia polymorpha HOM05D007518 ORTHO05D008168 5.4e-26 121.7 164 67.1
Nitab4.5_0016476g0010 Nicotiana tabacum HOM05D007518 ORTHO05D008168 7.0e-26 121.3 129 77.5
Actinidia12117 Actinidia chinensis HOM05D007518 ORTHO05D008168 9.1e-26 120.9 104 65.4
Lsat_1_v5_gn_3_78660 Lactuca sativa HOM05D007518 ORTHO05D008168 9.1e-26 120.9 173 63.6
CARHR160200 Cardamine hirsuta HOM05D007518 ORTHO05D008168 3.5e-25 119.0 168 66.1
PGSC0003DMG400017778 Solanum tuberosum HOM05D007518 ORTHO05D008168 3.5e-25 119.0 136 72.1
ATR0733G025 Amborella trichopoda HOM05D007518 ORTHO05D008168 7.7e-25 117.9 132 75.8
ECA246G0481 Erigeron canadensis HOM05D000085 ORTHO05D000274 1.3e-24 117.1 125 77.6
Duzib187G0536 Durio zibethinus HOM05D007518 ORTHO05D008168 5.0e-24 115.2 104 64.4
Sc03g0000780 Simmondsia chinensis HOM05D007518 ORTHO05D008168 1.1e-23 114.0 157 68.2
Nitab4.5_0001038g0130 Nicotiana tabacum HOM05D007518 ORTHO05D008168 5.5e-23 111.7 129 74.4
Peaxi162Scf00751g00045 Petunia axillaris HOM05D007518 ORTHO05D008168 7.2e-23 111.3 129 62.8
Oeu007443.1 Olea europaea HOM05D007518 ORTHO05D008168 9.4e-23 110.9 168 64.9
CBR_g37409 Chara braunii HOM05D007518 ORTHO05D008168 1.2e-22 110.5 112 52.7
Psat2g160680 Pisum sativum HOM05D007518 ORTHO05D008168 1.2e-22 110.5 120 80.0
SMO361G0359 Selaginella moellendorffii HOM05D007518 ORTHO05D008168 2.7e-22 109.4 111 78.4
SEGI_19868 Sequoiadendron giganteum HOM05D007518 ORTHO05D008168 8.0e-22 107.8 168 59.5
unitig_62.g23458 Utricularia gibba HOM05D007518 ORTHO05D008168 8.0e-22 107.8 112 78.6
BcaB07g34066 Brassica carinata HOM05D007518 ORTHO05D008168 1.8e-21 106.7 185 41.6
SGA_v2.0_scaffold248G44914 Striga asiatica HOM05D007518 ORTHO05D008168 7.5e-20 101.3 134 69.4
BcaB07g34065 Brassica carinata HOM05D007518 ORTHO05D008168 2.2e-19 99.8 104 59.6
AagrBONN_evm.TU.Sc2ySwM_228.2926 Anthoceros agrestis HOM05D007518 ORTHO05D008168 6.3e-19 98.2 126 69.8
Dinv26823 Davidia involucrata HOM05D002420 ORTHO05D002422 6.3e-19 98.2 164 61.6
HPP92_023606 Vanilla planifolia HOM05D007518 ORTHO05D008168 1.6e-17 93.6 154 63.6
Actinidia02774 Actinidia chinensis HOM05D007518 ORTHO05D008168 3.3e-15 85.9 130 45.4
Zm00001eb098970 Zea mays HOM05D007518 ORTHO05D008168 1.2e-14 84.0 133 63.9
PRCOL_00004191 Prasinoderma coloniale HOM05D007518 ORTHO05D008168 6.8e-13 78.2 109 67.9
unitig_65.g29889 Utricularia gibba HOM05D007518 ORTHO05D008168 2.6e-12 76.3 123 53.7
Cre01.g043200 Chlamydomonas reinhardtii HOM05D007518 ORTHO05D008168 7.5e-12 74.7 103 43.7
SMO361G0415 Selaginella moellendorffii HOM05D007518 ORTHO05D008168 2.9e-11 72.8 100 40.0
MCO12G314 Micromonas commoda HOM05D007518 ORTHO05D008168 2.0e-09 66.6 53 60.4
Os10g0213700 Oryza sativa ssp. japonica HOM05D007518 ORTHO05D008168 1.3e-08 63.9 112 67.0
Atru.chr4.788 Acer truncatum HOM05D007518 ORTHO05D008168 2.1e-06 56.6 34 82.4


User provided reference genes

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