Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Eucgr.I02450 Eucalyptus grandis HOM05D006100 ORTHO05D007539 1.4e-60 236.1 125 100.0
Dinv39980 Davidia involucrata HOM05D006100 ORTHO05D007539 6.4e-24 114.4 85 69.4
Duzib147G1001 Durio zibethinus HOM05D006100 ORTHO05D007539 4.1e-23 111.7 133 54.9
PGR119G0418 Punica granatum HOM05D006100 ORTHO05D007539 2.7e-22 109.0 86 62.8
Thecc.01G036600 Theobroma cacao HOM05D006100 ORTHO05D007539 1.0e-21 107.1 81 67.9
Duzib264G0645 Durio zibethinus HOM05D006100 ORTHO05D007539 3.9e-21 105.1 90 65.6
COL.COLO4_22086 Corchorus olitorius HOM05D006100 ORTHO05D007539 8.6e-21 104.0 124 55.6
Phvul.002G029900 Phaseolus vulgaris HOM05D006100 ORTHO05D007539 1.1e-20 103.6 96 58.3
Lsat_1_v5_gn_4_148381 Lactuca sativa HOM05D006100 ORTHO05D007539 4.3e-20 101.7 87 58.6
Gohir.A11G184500 Gossypium hirsutum HOM05D006100 ORTHO05D007539 9.5e-20 100.5 112 58.9
Gohir.A10G094900 Gossypium hirsutum HOM05D006100 ORTHO05D007539 2.1e-19 99.4 96 56.2
Haze_15098 Corylus avellana HOM05D006100 ORTHO05D007539 4.7e-19 98.2 95 58.9
Prupe.7G153900 Prunus persica HOM05D006100 ORTHO05D007539 6.2e-19 97.8 127 49.6
Ciclev10026748m.g Citrus clementina HOM05D006100 ORTHO05D007539 8.0e-19 97.4 98 58.2
TWI09G0021 Tripterygium wilfordii HOM05D006100 ORTHO05D007539 1.4e-18 96.7 132 50.0
CSS0018588 Camellia sinensis var. sinensis HOM05D006100 ORTHO05D007539 2.3e-18 95.9 87 64.4
Medtr5g020060 Medicago truncatula HOM05D006100 ORTHO05D007539 3.1e-18 95.5 69 69.6
QL06p045927 Quercus lobata HOM05D006100 ORTHO05D007539 3.1e-18 95.5 89 58.4
Lalb_Chr09g0322441 Lupinus albus HOM05D006100 ORTHO05D007539 4.0e-18 95.1 91 56.0
THA.LOC104821276 Tarenaya hassleriana HOM05D006100 ORTHO05D007539 5.2e-18 94.7 86 64.0
ECA232G0790 Erigeron canadensis HOM05D006100 ORTHO05D007539 1.2e-17 93.6 90 55.6
FvH4_1g13390 Fragaria vesca HOM05D006100 ORTHO05D007539 2.6e-17 92.4 80 61.2
FAN19G3207 Fragaria x ananassa HOM05D006100 ORTHO05D007539 2.6e-17 92.4 80 61.2
Lj2g0016254 Lotus japonicus HOM05D006100 ORTHO05D007539 2.6e-17 92.4 86 58.1
arahy.Tifrunner.gnm1.ann1.L1JEHI Arachis hypogaea HOM05D006100 ORTHO05D007539 4.4e-17 91.7 84 57.1
FAN28G1903 Fragaria x ananassa HOM05D006100 ORTHO05D007539 4.4e-17 91.7 80 58.8
VMungo1215G0978 Vigna mungo HOM05D006100 ORTHO05D007539 5.8e-17 91.3 81 60.5
arahy.Tifrunner.gnm1.ann1.IKK69W Arachis hypogaea HOM05D006100 ORTHO05D007539 7.5e-17 90.9 87 55.2
Psat2g159960 Pisum sativum HOM05D006100 ORTHO05D007539 7.5e-17 90.9 119 48.7
Carub.0008s2773 Capsella rubella HOM05D006100 ORTHO05D007539 9.8e-17 90.5 78 62.8
Cpa.g.sc6.110 Carica papaya HOM05D006100 ORTHO05D007539 9.8e-17 90.5 94 52.1
CiPaw.02G017200 Carya illinoinensis HOM05D006100 ORTHO05D007539 9.8e-17 90.5 86 59.3
AT5G66780 Arabidopsis thaliana HOM05D006100 ORTHO05D007539 2.9e-16 89.0 88 56.8
MD15G1262900 Malus domestica HOM05D006100 ORTHO05D007539 2.9e-16 89.0 97 53.6
CiPaw.01G037400 Carya illinoinensis HOM05D006100 ORTHO05D007539 3.7e-16 88.6 125 48.0
PGR102G3048 Punica granatum HOM05D006100 ORTHO05D007539 3.7e-16 88.6 137 46.7
Glyma.11G067900 Glycine max HOM05D006100 ORTHO05D007539 4.9e-16 88.2 89 57.3
HanXRQChr11g0324821 Helianthus annuus HOM05D006100 ORTHO05D007539 4.9e-16 88.2 84 53.6
BcaC06g34744 Brassica carinata HOM05D006100 ORTHO05D007539 1.1e-15 87.0 82 59.8
C07p25000 Brassica napus HOM05D006100 ORTHO05D007539 1.1e-15 87.0 82 59.8
BolC7t43033H Brassica oleracea HOM05D006100 ORTHO05D007539 1.1e-15 87.0 82 59.8
Cfa004303 Carpinus fangiana HOM05D006100 ORTHO05D007539 1.1e-15 87.0 91 53.8
Aqoxy6G01099 Aquilegia oxysepala HOM05D006100 ORTHO05D007539 1.9e-15 86.3 114 45.6
RcHm_v2.0_Chr2g0101751 Rosa chinensis HOM05D006100 ORTHO05D007539 1.9e-15 86.3 94 50.0
BcaB07g29655 Brassica carinata HOM05D006100 ORTHO05D007539 2.4e-15 85.9 82 58.5
FAN26G1330 Fragaria x ananassa HOM05D006100 ORTHO05D007539 3.2e-15 85.5 66 63.6
A07p17150 Brassica napus HOM05D006100 ORTHO05D007539 4.1e-15 85.1 82 58.5
BraA07t29442Z Brassica rapa HOM05D006100 ORTHO05D007539 4.1e-15 85.1 82 58.5
MD02G1148600 Malus domestica HOM05D006100 ORTHO05D007539 4.1e-15 85.1 72 61.1
BcaC03g18400 Brassica carinata HOM05D006100 ORTHO05D007539 5.4e-15 84.7 64 65.6
C02p64790 Brassica napus HOM05D006100 ORTHO05D007539 5.4e-15 84.7 64 65.6
BolC2t12540H Brassica oleracea HOM05D006100 ORTHO05D007539 5.4e-15 84.7 64 65.6
MD15G1262800 Malus domestica HOM05D006100 ORTHO05D007539 5.4e-15 84.7 72 59.7
FAN23G1739 Fragaria x ananassa HOM05D006100 ORTHO05D007539 7.0e-15 84.3 96 51.0
Sed0016253 Sechium edule HOM05D006100 ORTHO05D007539 7.0e-15 84.3 114 47.4
AL8G44670 Arabidopsis lyrata HOM05D006100 ORTHO05D007539 1.2e-14 83.6 119 46.2
CARHR280920 Cardamine hirsuta HOM05D006100 ORTHO05D007539 1.2e-14 83.6 100 52.0
Oeu009416.1 Olea europaea HOM05D006100 ORTHO05D007539 1.2e-14 83.6 97 48.5
Aa31LG1G15340 Aethionema arabicum HOM05D006100 ORTHO05D007539 1.6e-14 83.2 67 65.7
FAN23G0264 Fragaria x ananassa HOM05D006100 ORTHO05D007539 1.6e-14 83.2 110 48.2
BcaB02g09991 Brassica carinata HOM05D006100 ORTHO05D007539 2.1e-14 82.8 71 64.8
FvH4_1g13380 Fragaria vesca HOM05D006100 ORTHO05D007539 2.7e-14 82.4 96 50.0
FAN19G2702 Fragaria x ananassa HOM05D006100 ORTHO05D007539 2.7e-14 82.4 96 50.0
FAN26G0501 Fragaria x ananassa HOM05D006100 ORTHO05D007539 3.5e-14 82.0 96 49.0
Rhsim08G0115500 Rhododendron simsii HOM05D006100 ORTHO05D007539 3.5e-14 82.0 75 61.3
Sp2g29900 Schrenkiella parvula HOM05D006100 ORTHO05D007539 3.5e-14 82.0 111 45.0
FAN28G0382 Fragaria x ananassa HOM05D006100 ORTHO05D007539 4.6e-14 81.6 61 63.9
Actinidia19182 Actinidia chinensis HOM05D006100 ORTHO05D007539 6.0e-14 81.3 93 54.8
Atru.chr3.567 Acer truncatum HOM05D006100 ORTHO05D007539 7.8e-14 80.9 136 42.6
RcHm_v2.0_Chr2g0101741 Rosa chinensis HOM05D006100 ORTHO05D007539 7.8e-14 80.9 113 45.1
Gohir.D10G093000 Gossypium hirsutum HOM05D006100 ORTHO05D007539 1.3e-13 80.1 97 51.5
Oeu041448.1 Olea europaea HOM05D006100 ORTHO05D007539 1.3e-13 80.1 97 47.4
Os03g0723400 Oryza sativa ssp. japonica HOM05D006100 ORTHO05D007539 1.3e-13 80.1 77 55.8
Thhalv10005154m.g Eutrema salsugineum HOM05D006100 ORTHO05D007539 3.9e-13 78.6 114 46.5
vmacro17841 Vaccinium macrocarpon HOM05D006100 ORTHO05D007539 3.9e-13 78.6 78 56.4
A02p44400 Brassica napus HOM05D006100 ORTHO05D007539 5.1e-13 78.2 82 53.7
BraA02t09357Z Brassica rapa HOM05D006100 ORTHO05D007539 5.1e-13 78.2 82 53.7
CANSAT01G1084 Cannabis sativa HOM05D006100 ORTHO05D007539 1.5e-12 76.6 82 56.1
Nitab4.5_0003233g0010 Nicotiana tabacum HOM05D006100 ORTHO05D007539 1.5e-12 76.6 83 53.0
Prupe.7G153800 Prunus persica HOM05D006100 ORTHO05D007539 3.3e-12 75.5 68 58.8
Nn5g29589 Nelumbo nucifera HOM05D006100 ORTHO05D007539 4.3e-12 75.1 87 50.6
Nitab4.5_0001385g0150 Nicotiana tabacum HOM05D006100 ORTHO05D007539 4.3e-12 75.1 95 51.6
Glyma.16G140500 Glycine max HOM05D006100 ORTHO05D007539 5.6e-12 74.7 66 54.5
Nitab4.5_0000434g0150 Nicotiana tabacum HOM05D006100 ORTHO05D007539 5.6e-12 74.7 95 51.6
PSO541G1538 Papaver somniferum HOM05D006100 ORTHO05D007539 7.3e-12 74.3 126 40.5
unitig_899.g14492 Utricularia gibba HOM05D006100 ORTHO05D007539 9.5e-12 73.9 112 43.8
PSO675G2321 Papaver somniferum HOM05D006100 ORTHO05D007539 1.6e-11 73.2 125 39.2
ClCG01G019510 Citrullus lanatus HOM05D006100 ORTHO05D007539 4.7e-11 71.6 124 40.3
Peaxi162Scf00515g00519 Petunia axillaris HOM05D006100 ORTHO05D007539 6.2e-11 71.2 94 48.9
SGA_v2.0_scaffold276G46633 Striga asiatica HOM05D006100 ORTHO05D007539 2.3e-10 69.3 119 39.5
MSTRG.2759 Avicennia marina HOM05D006100 ORTHO05D007539 4.0e-10 68.6 113 41.6
CsaV3_6G046200 Cucumis sativus L. HOM05D006100 ORTHO05D007539 1.2e-09 67.0 115 45.2
MD02G1148700 Malus domestica HOM05D006100 ORTHO05D007539 1.2e-09 67.0 89 46.1
Sopen02g013800 Solanum pennellii HOM05D006100 ORTHO05D007539 1.2e-09 67.0 93 50.5
Peaxi162Scf00008g03716 Petunia axillaris HOM05D006100 ORTHO05D007539 1.5e-09 66.6 63 58.7
CAN.G358.97 Capsicum annuum HOM05D006100 ORTHO05D007539 2.0e-09 66.2 83 53.0
GSVIVG01018974001 Vitis vinifera HOM05D006100 ORTHO05D007539 5.8e-09 64.7 98 43.9
Solyc02g062770.2 Solanum lycopersicum HOM05D006100 ORTHO05D007539 7.5e-09 64.3 109 45.0
PGSC0003DMG400015478 Solanum tuberosum HOM05D006100 ORTHO05D007539 7.5e-09 64.3 101 43.6
CSS0029658 Camellia sinensis var. sinensis HOM05D006100 ORTHO05D007539 9.9e-09 63.9 60 55.0
MBI16_g38642_MAGBIO Magnolia biondii HOM05D006100 ORTHO05D007539 9.9e-09 63.9 85 43.5
Solyc02g085330.1 Solanum lycopersicum HOM05D006100 ORTHO05D007539 1.3e-08 63.5 71 52.1
Migut.H00995 Erythranthe guttata HOM05D006100 ORTHO05D007539 8.3e-08 60.8 131 38.9
Oeu033643.1 Olea europaea HOM05D006100 ORTHO05D007539 1.1e-07 60.5 56 53.6
Nitab4.5_0000136g0440 Nicotiana tabacum HOM05D006100 ORTHO05D007539 1.4e-07 60.1 109 40.4
TPR.G34229 Trifolium pratense HOM05D006100 ORTHO05D007539 1.4e-07 60.1 68 47.1
HanXRQChr16g0530351 Helianthus annuus HOM05D006100 ORTHO05D007539 1.9e-07 59.7 57 47.4
Sopen02g030020 Solanum pennellii HOM05D006100 ORTHO05D007539 1.9e-07 59.7 113 38.9
unitig_21.g20955 Utricularia gibba HOM05D003234 ORTHO05D003635 2.4e-07 59.3 76 48.7
EL10Ac6g15568 Beta vulgaris HOM05D006100 ORTHO05D007539 3.2e-07 58.9 99 43.4
DCAR_025920 Daucus carota HOM05D006100 ORTHO05D007539 5.4e-07 58.2 66 50.0
AUR62004046 Chenopodium quinoa HOM05D006100 ORTHO05D007539 1.2e-06 57.0 86 44.2
Lj4g0020328 Lotus japonicus HOM05D006100 ORTHO05D007539 1.2e-06 57.0 79 41.8
Gorai.011G102200 Gossypium raimondii HOM05D006100 ORTHO05D007539 2.7e-06 55.8 64 48.4


User provided reference genes

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