Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Eucgr.I02316 Eucalyptus grandis HOM05D006610 ORTHO05D008447 1.0e-166 590.1 318 100.0
PGR119G0279 Punica granatum HOM05D006610 ORTHO05D008447 1.4e-70 270.8 161 85.7
Gohir.A02G173500 Gossypium hirsutum HOM05D006610 ORTHO05D008447 3.9e-70 269.2 219 67.6
Gohir.D03G006400 Gossypium hirsutum HOM05D006610 ORTHO05D008447 6.7e-70 268.5 221 66.1
Gorai.003G006700 Gossypium raimondii HOM05D006610 ORTHO05D008447 6.7e-70 268.5 221 67.0
COL.COLO4_22482 Corchorus olitorius HOM05D006610 ORTHO05D008447 1.1e-69 267.7 222 68.5
Manes.02G109300 Manihot esculenta HOM05D006610 ORTHO05D008447 3.3e-69 266.2 224 66.5
Haze_03713 Corylus avellana HOM05D006610 ORTHO05D008447 1.7e-68 263.8 227 67.8
GSVIVG01007223001 Vitis vinifera HOM05D006610 ORTHO05D008447 3.7e-68 262.7 221 67.4
Actinidia28724 Actinidia chinensis HOM05D006610 ORTHO05D008447 6.3e-68 261.9 224 65.6
Cpa.g.sc6.302 Carica papaya HOM05D006610 ORTHO05D008447 6.3e-68 261.9 228 67.1
AUR62003705 Chenopodium quinoa HOM05D006610 ORTHO05D008447 6.3e-68 261.9 162 82.1
TAR186G0001 Trochodendron aralioides HOM05D006610 ORTHO05D008447 8.2e-68 261.5 219 66.7
Phvul.003G266300 Phaseolus vulgaris HOM05D006610 ORTHO05D008447 1.4e-67 260.8 219 65.8
Sabra05G0089400 Salix brachista HOM05D006610 ORTHO05D008447 1.4e-67 260.8 224 64.7
CSS0043605 Camellia sinensis var. sinensis HOM05D006610 ORTHO05D008447 4.1e-67 259.2 221 65.6
Duzib187G1817 Durio zibethinus HOM05D006610 ORTHO05D008447 4.1e-67 259.2 221 67.9
HanXRQChr16g0531751 Helianthus annuus HOM05D006610 ORTHO05D008447 9.1e-67 258.1 158 82.3
MD02G1124800 Malus domestica HOM05D006610 ORTHO05D008447 1.2e-66 257.7 154 83.8
TWI09G0665 Tripterygium wilfordii HOM05D006610 ORTHO05D008447 1.2e-66 257.7 227 65.6
Glyma.16G123000 Glycine max HOM05D006610 ORTHO05D008447 2.0e-66 256.9 227 65.2
vmacro18433 Vaccinium macrocarpon HOM05D006610 ORTHO05D008447 2.6e-66 256.5 154 82.5
VMungo0251G0375 Vigna mungo HOM05D006610 ORTHO05D008447 2.6e-66 256.5 219 63.5
Atru.chr3.883 Acer truncatum HOM05D006610 ORTHO05D008447 4.5e-66 255.8 223 66.4
Atru.chr3.894 Acer truncatum HOM05D006610 ORTHO05D008447 4.5e-66 255.8 223 66.4
Hma1.2p1_0315F.1_g122440 Hydrangea macrophylla HOM05D006610 ORTHO05D008447 5.9e-66 255.4 223 66.4
AUR62018012 Chenopodium quinoa HOM05D006610 ORTHO05D008447 7.7e-66 255.0 220 65.9
Potri.005G109100 Populus trichocarpa HOM05D006610 ORTHO05D008447 7.7e-66 255.0 159 81.8
Rhsim08G0031200 Rhododendron simsii HOM05D006610 ORTHO05D008447 1.0e-65 254.6 154 83.1
RcHm_v2.0_Chr2g0098651 Rosa chinensis HOM05D006610 ORTHO05D008447 1.0e-65 254.6 226 65.0
Ciclev10026475m.g Citrus clementina HOM05D006610 ORTHO05D008447 1.7e-65 253.8 160 80.6
Lj4A224G29 Lonicera japonica HOM05D006610 ORTHO05D008447 2.2e-65 253.4 152 83.6
PGSC0003DMG400003653 Solanum tuberosum HOM05D006610 ORTHO05D008447 2.2e-65 253.4 220 63.6
arahy.Tifrunner.gnm1.ann1.M7YZEH Arachis hypogaea HOM05D006610 ORTHO05D008447 3.8e-65 252.7 219 66.7
CsaV3_3G000580 Cucumis sativus L. HOM05D006610 ORTHO05D008447 3.8e-65 252.7 158 80.4
Prupe.7G173500 Prunus persica HOM05D006610 ORTHO05D008447 3.8e-65 252.7 227 62.6
Cfa007018 Carpinus fangiana HOM05D006610 ORTHO05D008447 6.5e-65 251.9 237 63.7
Lj4g0021807 Lotus japonicus HOM05D006610 ORTHO05D008447 6.5e-65 251.9 223 64.1
Nitab4.5_0008552g0010 Nicotiana tabacum HOM05D006610 ORTHO05D008447 8.5e-65 251.5 250 58.8
arahy.Tifrunner.gnm1.ann1.UN150X Arachis hypogaea HOM05D006610 ORTHO05D008447 1.1e-64 251.1 219 62.6
MELO3C013747.2 Cucumis melo HOM05D006610 ORTHO05D008447 1.4e-64 250.8 158 80.4
DCAR_014043 Daucus carota HOM05D006610 ORTHO05D008447 1.4e-64 250.8 227 62.1
ECA246G3062 Erigeron canadensis HOM05D006610 ORTHO05D008447 1.4e-64 250.8 148 85.1
Nitab4.5_0001789g0060 Nicotiana tabacum HOM05D006610 ORTHO05D008447 1.9e-64 250.4 221 66.1
FAN19G1298 Fragaria x ananassa HOM05D006610 ORTHO05D008447 3.2e-64 249.6 225 64.4
EL10Ac6g15167 Beta vulgaris HOM05D006610 ORTHO05D008447 5.5e-64 248.8 158 79.7
FAN28G2812 Fragaria x ananassa HOM05D006610 ORTHO05D008447 5.5e-64 248.8 226 65.0
Psat4g102280 Pisum sativum HOM05D006610 ORTHO05D008447 7.2e-64 248.4 154 78.6
FAN23G0795 Fragaria x ananassa HOM05D006610 ORTHO05D008447 9.4e-64 248.1 168 78.0
Lalb_Chr16g0391471 Lupinus albus HOM05D006610 ORTHO05D008447 1.2e-63 247.7 154 79.9
Peaxi162Scf00328g00315 Petunia axillaris HOM05D006610 ORTHO05D008447 1.2e-63 247.7 154 81.8
CDE09G0967 Ceratophyllum demersum HOM05D006610 ORTHO05D008447 2.1e-63 246.9 158 79.7
Sed0015497 Sechium edule HOM05D006610 ORTHO05D008447 2.1e-63 246.9 158 78.5
CAN.G890.6 Capsicum annuum HOM05D006610 ORTHO05D008447 2.7e-63 246.5 219 64.8
Sopen02g028290 Solanum pennellii HOM05D006610 ORTHO05D008447 2.7e-63 246.5 219 62.1
Hund16514 Selenicereus undatus HOM05D006610 ORTHO05D008447 3.6e-63 246.1 158 77.8
CSS0036095 Camellia sinensis var. sinensis HOM05D006610 ORTHO05D008447 4.7e-63 245.7 145 84.8
Solyc02g083500.3 Solanum lycopersicum HOM05D006610 ORTHO05D008447 6.1e-63 245.4 220 63.2
Cc07_g11190 Coffea canephora HOM05D006610 ORTHO05D008447 1.8e-62 243.8 159 78.6
TPR.G19505 Trifolium pratense HOM05D006610 ORTHO05D008447 1.8e-62 243.8 153 77.8
CANSAT01G0612 Cannabis sativa HOM05D006610 ORTHO05D008447 2.3e-62 243.4 220 63.2
Medtr8g075110 Medicago truncatula HOM05D006610 ORTHO05D008447 2.3e-62 243.4 153 78.4
MSTRG.15312 Avicennia marina HOM05D006610 ORTHO05D008447 3.0e-62 243.0 153 77.8
ATR0180G027 Amborella trichopoda HOM05D006610 ORTHO05D008447 3.9e-62 242.7 155 78.7
Aqoxy6G02108 Aquilegia oxysepala HOM05D006610 ORTHO05D008447 1.1e-61 241.1 165 73.9
CDE02G2830 Ceratophyllum demersum HOM05D006610 ORTHO05D008447 5.7e-61 238.8 158 77.8
AUR62034480 Chenopodium quinoa HOM05D006610 ORTHO05D008447 5.7e-61 238.8 139 86.3
THA.LOC104819168 Tarenaya hassleriana HOM05D006610 ORTHO05D008447 5.7e-61 238.8 217 60.8
SGA_v2.0_scaffold49G18127 Striga asiatica HOM05D006610 ORTHO05D008447 6.3e-60 235.3 163 72.4
Migut.H00253 Erythranthe guttata HOM05D006610 ORTHO05D008447 1.1e-59 234.6 153 76.5
SalBow3G0370 Salvia bowleyana HOM05D006610 ORTHO05D008447 3.1e-59 233.0 153 74.5
FAN26G1933 Fragaria x ananassa HOM05D006610 ORTHO05D008447 1.5e-58 230.7 220 62.3
Gohir.D11G179450 Gossypium hirsutum HOM05D006610 ORTHO05D008447 4.5e-58 229.2 149 79.9
SalBow3G0548 Salvia bowleyana HOM05D006610 ORTHO05D008447 4.5e-58 229.2 221 59.3
THA.LOC104821342 Tarenaya hassleriana HOM05D006610 ORTHO05D008447 4.5e-58 229.2 157 72.0
Nn6g31943 Nelumbo nucifera HOM05D006610 ORTHO05D008447 2.2e-57 226.9 133 85.7
Gorai.007G191500 Gossypium raimondii HOM05D006610 ORTHO05D008447 1.1e-56 224.6 198 65.2
PSO170G5432 Papaver somniferum HOM05D006610 ORTHO05D008447 1.9e-56 223.8 155 73.5
Lsat_1_v5_gn_3_71540 Lactuca sativa HOM05D006610 ORTHO05D008447 4.2e-56 222.6 139 82.0
Os09g0541700 Oryza sativa ssp. japonica HOM05D006610 ORTHO05D008447 4.2e-56 222.6 219 60.3
AL8G45500 Arabidopsis lyrata HOM05D006610 ORTHO05D008447 7.2e-56 221.9 168 66.7
Carub.0008s2842 Capsella rubella HOM05D006610 ORTHO05D008447 8.8e-54 214.9 166 66.9
AUR62018013 Chenopodium quinoa HOM05D006610 ORTHO05D008447 2.0e-53 213.8 220 57.7
Sp2g30600 Schrenkiella parvula HOM05D006610 ORTHO05D008447 2.6e-53 213.4 217 55.8
MBI05_g19586_MAGBIO Magnolia biondii HOM05D006610 ORTHO05D008447 3.3e-53 213.0 131 79.4
unitig_736.g22562 Utricularia gibba HOM05D006610 ORTHO05D008447 9.7e-53 211.5 169 65.7
Duzib147G1005 Durio zibethinus HOM05D006610 ORTHO05D008447 4.8e-52 209.1 220 57.7
Aa31LG1G14570 Aethionema arabicum HOM05D006610 ORTHO05D008447 6.3e-52 208.8 229 55.0
CARHR281660 Cardamine hirsuta HOM05D006610 ORTHO05D008447 1.8e-51 207.2 171 63.7
ClCG10G000510 Citrullus lanatus HOM05D006610 ORTHO05D008447 3.1e-51 206.5 231 55.4
A02p44620 Brassica napus HOM05D006610 ORTHO05D008447 7.0e-51 205.3 154 65.6
BraA02t09378Z Brassica rapa HOM05D006610 ORTHO05D008447 7.0e-51 205.3 154 65.6
Thhalv10004913m.g Eutrema salsugineum HOM05D006610 ORTHO05D008447 7.0e-51 205.3 157 64.3
BolC2t12560H Brassica oleracea HOM05D006610 ORTHO05D008447 9.1e-51 204.9 139 71.9
AT5G66090 Arabidopsis thaliana HOM05D006610 ORTHO05D008447 1.2e-50 204.5 219 54.8
SEGI_37776 Sequoiadendron giganteum HOM05D006610 ORTHO05D008447 2.6e-50 203.4 167 61.1
AagrBONN_evm.TU.Sc2ySwM_369.589 Anthoceros agrestis HOM05D006610 ORTHO05D008447 1.3e-49 201.1 138 70.3
QL06p051388 Quercus lobata HOM05D006610 ORTHO05D008447 1.1e-48 198.0 112 90.2
Pp3c9_6630 Physcomitrium patens HOM05D006610 ORTHO05D008447 2.7e-47 193.4 159 59.1
Oeu000676.1 Olea europaea HOM05D006610 ORTHO05D008447 1.5e-45 187.6 112 83.0
SMO361G0750 Selaginella moellendorffii HOM05D004797 ORTHO05D005752 1.1e-43 181.4 146 61.6
Hma1.2p1_3766F.1_g337520 Hydrangea macrophylla HOM05D006610 ORTHO05D008447 9.1e-43 178.3 113 82.3
Lsat_1_v5_gn_2_20941 Lactuca sativa HOM05D006610 ORTHO05D008447 8.5e-41 171.8 115 76.5
Thecc.01G013000 Theobroma cacao HOM05D006610 ORTHO05D008447 1.3e-33 147.9 153 58.8
HPP92_025898 Vanilla planifolia HOM05D006610 ORTHO05D008447 7.2e-32 142.1 104 68.3
Sc03g0003740 Simmondsia chinensis HOM05D006610 ORTHO05D008447 2.1e-31 140.6 151 55.6
FvH4_1g11240 Fragaria vesca HOM05D006610 ORTHO05D008447 4.7e-31 139.4 156 55.1
Nn5g30811 Nelumbo nucifera HOM05D006610 ORTHO05D008447 8.0e-31 138.7 163 52.8
Dinv08559 Davidia involucrata HOM05D006610 ORTHO05D008447 1.8e-30 137.5 75 90.7
Gohir.A11G172600 Gossypium hirsutum HOM05D006610 ORTHO05D008447 8.9e-30 135.2 154 55.2
Cre15.g638400 Chlamydomonas reinhardtii HOM05D006610 ORTHO05D008447 2.5e-24 117.1 163 39.9
BcaC07g37739 Brassica carinata HOM05D006610 ORTHO05D008447 6.8e-22 109.0 66 77.3
BolC8t48119H Brassica oleracea HOM05D006610 ORTHO05D008447 6.8e-22 109.0 66 77.3
vmacro18432 Vaccinium macrocarpon HOM05D006610 ORTHO05D008447 4.3e-16 89.7 58 69.0
QL06p051391 Quercus lobata HOM05D006610 ORTHO05D008447 3.7e-12 76.6 114 44.7
Solyc02g083525.1 Solanum lycopersicum HOM05D006610 ORTHO05D008447 3.7e-12 76.6 46 80.4
HPP92_025903 Vanilla planifolia HOM05D006610 ORTHO05D008447 4.7e-07 59.7 40 70.0


User provided reference genes

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