Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Eucgr.I02210 Eucalyptus grandis HOM05D004986 ORTHO05D005898 1.5e-234 815.8 410 100.0
PGR119G1257 Punica granatum HOM05D004986 ORTHO05D005898 6.1e-140 501.5 413 65.6
Manes.02G115500 Manihot esculenta HOM05D004986 ORTHO05D005898 6.3e-137 491.5 400 62.8
Atru.chr10.1816 Acer truncatum HOM05D004986 ORTHO05D005898 1.2e-135 487.3 399 63.2
Atru.chr10.1831 Acer truncatum HOM05D004986 ORTHO05D005898 7.7e-135 484.6 400 63.2
Dinv28304 Davidia involucrata HOM05D004986 ORTHO05D005898 9.4e-133 477.6 401 62.3
QL11p035166 Quercus lobata HOM05D004986 ORTHO05D005898 3.6e-132 475.7 412 62.4
Cfa007104 Carpinus fangiana HOM05D004986 ORTHO05D005898 2.3e-131 473.0 406 63.1
Manes.01G157000 Manihot esculenta HOM05D004986 ORTHO05D005898 3.0e-131 472.6 400 61.8
GSVIVG01022308001 Vitis vinifera HOM05D004986 ORTHO05D005898 5.1e-131 471.9 401 61.3
Medtr8g073110 Medicago truncatula HOM05D004986 ORTHO05D005898 1.1e-130 470.7 403 60.5
Hma1.2p1_0085F.1_g044450 Hydrangea macrophylla HOM05D004986 ORTHO05D005898 2.2e-129 466.5 396 62.9
Lalb_Chr05g0214931 Lupinus albus HOM05D004986 ORTHO05D005898 2.2e-129 466.5 401 61.8
arahy.Tifrunner.gnm1.ann1.H550X0 Arachis hypogaea HOM05D004986 ORTHO05D005898 3.7e-129 465.7 400 60.5
CSS0007723 Camellia sinensis var. sinensis HOM05D004986 ORTHO05D005898 3.7e-129 465.7 400 62.0
Prupe.7G185600 Prunus persica HOM05D004986 ORTHO05D005898 1.1e-128 464.2 415 60.7
Ca_02840_v3 Cicer arietinum L. HOM05D004986 ORTHO05D005898 1.4e-128 463.8 404 61.4
Ciclev10025602m.g Citrus clementina HOM05D004986 ORTHO05D005898 7.0e-128 461.5 409 59.7
Lj3g0020964 Lotus japonicus HOM05D004986 ORTHO05D005898 2.6e-127 459.5 398 60.6
Cpa.g.sc91.49 Carica papaya HOM05D004986 ORTHO05D005898 5.9e-127 458.4 409 59.9
Actinidia22885 Actinidia chinensis HOM05D004986 ORTHO05D005898 1.3e-126 457.2 400 60.0
CiPaw.07G000800 Carya illinoinensis HOM05D004986 ORTHO05D005898 2.2e-126 456.4 401 61.1
Phvul.010G020700 Phaseolus vulgaris HOM05D004986 ORTHO05D005898 2.2e-126 456.4 403 59.3
VMungo0331G1669 Vigna mungo HOM05D004986 ORTHO05D005898 8.5e-126 454.5 397 58.9
Glyma.16G112300 Glycine max HOM05D004986 ORTHO05D005898 2.5e-125 453.0 400 59.0
Actinidia32993 Actinidia chinensis HOM05D004986 ORTHO05D005898 5.5e-125 451.8 400 60.8
MD15G1228500 Malus domestica HOM05D004986 ORTHO05D005898 9.4e-125 451.1 417 58.5
Glyma.09G196600 Glycine max HOM05D004986 ORTHO05D005898 2.1e-124 449.9 400 59.0
Haze_03636 Corylus avellana HOM05D004986 ORTHO05D005898 1.0e-123 447.6 445 56.4
Psat4g105800 Pisum sativum HOM05D004986 ORTHO05D005898 1.4e-123 447.2 406 58.6
Cc07_g12070 Coffea canephora HOM05D004986 ORTHO05D005898 2.3e-123 446.4 405 59.0
TWI53G0851 Tripterygium wilfordii HOM05D004986 ORTHO05D005898 2.3e-123 446.4 400 59.8
Thecc.01G002600 Theobroma cacao HOM05D004986 ORTHO05D005898 8.8e-123 444.5 400 60.8
CANSAT21G0416 Cannabis sativa HOM05D004986 ORTHO05D005898 2.0e-122 443.4 411 58.6
Hund21384 Selenicereus undatus HOM05D004986 ORTHO05D005898 4.4e-122 442.2 401 59.1
TAR628G0962 Trochodendron aralioides HOM05D004986 ORTHO05D005898 4.4e-122 442.2 402 60.0
Rhsim10G0191900 Rhododendron simsii HOM05D004986 ORTHO05D005898 5.7e-122 441.8 400 58.8
Carub.0008s2856 Capsella rubella HOM05D004986 ORTHO05D005898 2.2e-121 439.9 399 58.1
AT5G65960 Arabidopsis thaliana HOM05D004986 ORTHO05D005898 3.7e-121 439.1 399 58.6
arahy.Tifrunner.gnm1.ann1.UZ6AL0 Arachis hypogaea HOM05D004986 ORTHO05D005898 8.2e-121 438.0 433 55.0
Nitab4.5_0004269g0070 Nicotiana tabacum HOM05D004986 ORTHO05D005898 1.1e-120 437.6 405 58.5
Migut.B01487 Erythranthe guttata HOM05D004986 ORTHO05D005898 1.8e-120 436.8 400 58.0
AL8G45680 Arabidopsis lyrata HOM05D004986 ORTHO05D005898 2.4e-120 436.4 399 59.4
DCAR_024399 Daucus carota HOM05D004986 ORTHO05D005898 2.4e-120 436.4 406 57.6
FvH4_1g10130 Fragaria vesca HOM05D004986 ORTHO05D005898 3.1e-120 436.0 407 57.0
RcHm_v2.0_Chr2g0096901 Rosa chinensis HOM05D004986 ORTHO05D005898 3.1e-120 436.0 413 56.9
FAN23G1121 Fragaria x ananassa HOM05D004986 ORTHO05D005898 4.1e-120 435.6 407 57.0
Nitab4.5_0000495g0010 Nicotiana tabacum HOM05D004986 ORTHO05D005898 5.3e-120 435.3 407 59.0
CAN.G647.4 Capsicum annuum HOM05D004986 ORTHO05D005898 9.1e-120 434.5 404 58.7
FAN23G2177 Fragaria x ananassa HOM05D004986 ORTHO05D005898 9.1e-120 434.5 407 57.0
Sp2g30730 Schrenkiella parvula HOM05D004986 ORTHO05D005898 2.0e-119 433.3 407 57.2
PSO170G5246 Papaver somniferum HOM05D004986 ORTHO05D005898 3.5e-119 432.6 409 57.5
Oeu002901.1 Olea europaea HOM05D004986 ORTHO05D005898 1.7e-118 430.3 402 57.0
Thhalv10004346m.g Eutrema salsugineum HOM05D004986 ORTHO05D005898 2.2e-118 429.9 408 57.8
FAN19G1207 Fragaria x ananassa HOM05D004986 ORTHO05D005898 2.9e-118 429.5 407 56.3
FAN26G2552 Fragaria x ananassa HOM05D004986 ORTHO05D005898 3.8e-118 429.1 407 56.5
FAN28G2129 Fragaria x ananassa HOM05D004986 ORTHO05D005898 3.8e-118 429.1 407 56.5
Aa31LG1G14460 Aethionema arabicum HOM05D004986 ORTHO05D005898 8.5e-118 427.9 401 58.4
MSTRG.17107 Avicennia marina HOM05D004986 ORTHO05D005898 1.1e-117 427.6 402 57.0
Peaxi162Scf00920g00114 Petunia axillaris HOM05D004986 ORTHO05D005898 1.9e-117 426.8 408 58.8
Aqoxy6G01559 Aquilegia oxysepala HOM05D004986 ORTHO05D005898 5.5e-117 425.2 416 56.0
PGSC0003DMG400018667 Solanum tuberosum HOM05D004986 ORTHO05D005898 9.4e-117 424.5 404 58.2
TAR381G0383 Trochodendron aralioides HOM05D004986 ORTHO05D005898 2.1e-116 423.3 396 58.6
HanXRQChr10g0316221 Helianthus annuus HOM05D004986 ORTHO05D005898 6.1e-116 421.8 407 54.8
Duzib106G1274 Durio zibethinus HOM05D004986 ORTHO05D005898 8.0e-116 421.4 403 56.8
Sopen03g005900 Solanum pennellii HOM05D004986 ORTHO05D005898 1.0e-115 421.0 401 57.6
Gorai.005G068600 Gossypium raimondii HOM05D004986 ORTHO05D005898 4.0e-115 419.1 412 55.1
SalBow5G3763 Salvia bowleyana HOM05D004986 ORTHO05D005898 5.2e-115 418.7 401 54.9
Nn5g31026 Nelumbo nucifera HOM05D004986 ORTHO05D005898 6.8e-115 418.3 457 53.6
Solyc03g032050.4 Solanum lycopersicum HOM05D004986 ORTHO05D005898 6.8e-115 418.3 404 56.9
Gohir.D02G061000 Gossypium hirsutum HOM05D004986 ORTHO05D005898 2.6e-114 416.4 412 54.9
Sed0027663 Sechium edule HOM05D004986 ORTHO05D005898 7.5e-114 414.8 401 55.1
CsaV3_4G027660 Cucumis sativus L. HOM05D004986 ORTHO05D005898 9.8e-114 414.5 403 54.6
Gohir.A02G179000 Gossypium hirsutum HOM05D004986 ORTHO05D005898 2.8e-113 412.9 407 56.0
Gohir.A02G055800 Gossypium hirsutum HOM05D004986 ORTHO05D005898 1.1e-112 411.0 403 54.6
MELO3C026343.2 Cucumis melo HOM05D004986 ORTHO05D005898 1.8e-112 410.2 398 54.8
THA.LOC104826450 Tarenaya hassleriana HOM05D004986 ORTHO05D005898 1.8e-112 410.2 396 56.8
CARHR257450 Cardamine hirsuta HOM05D004986 ORTHO05D005898 7.0e-112 408.3 403 58.3
ClCG04G005010 Citrullus lanatus HOM05D004986 ORTHO05D005898 7.0e-112 408.3 398 55.5
Gohir.D03G000700 Gossypium hirsutum HOM05D004986 ORTHO05D005898 1.2e-111 407.5 398 56.5
Gorai.003G001100 Gossypium raimondii HOM05D004986 ORTHO05D005898 2.2e-110 403.3 398 56.3
EL10Ac3g05234 Beta vulgaris HOM05D004986 ORTHO05D005898 3.8e-110 402.5 396 54.3
vmacro20612 Vaccinium macrocarpon HOM05D004986 ORTHO05D005898 6.5e-110 401.7 402 54.7
Lj2C503G0 Lonicera japonica HOM05D004986 ORTHO05D005898 1.1e-109 401.0 392 55.9
A09p10240 Brassica napus HOM05D004986 ORTHO05D005898 1.2e-108 397.5 400 57.5
Lsat_1_v5_gn_2_73561 Lactuca sativa HOM05D004986 ORTHO05D005898 8.0e-108 394.8 404 53.7
ECA240G4103 Erigeron canadensis HOM05D004986 ORTHO05D005898 2.3e-107 393.3 401 53.6
Ah.10g026930 Amaranthus hybridus HOM05D004986 ORTHO05D005898 3.4e-106 389.4 401 53.9
unitig_26.g8860 Utricularia gibba HOM05D004986 ORTHO05D005898 1.3e-105 387.5 399 53.4
C09p12150 Brassica napus HOM05D004986 ORTHO05D005898 1.1e-104 384.4 401 55.6
SGA_v2.0_scaffold34G13577 Striga asiatica HOM05D004986 ORTHO05D005898 1.1e-104 384.4 430 50.9
BcaC04g23101 Brassica carinata HOM05D004986 ORTHO05D005898 1.8e-104 383.6 402 55.5
BolC9t54105H Brassica oleracea HOM05D004986 ORTHO05D005898 7.0e-104 381.7 402 55.2
Os04g0584800 Oryza sativa ssp. japonica HOM05D004986 ORTHO05D005898 2.7e-103 379.8 417 51.1
SGA_v2.0_scaffold52G19267 Striga asiatica HOM05D004986 ORTHO05D005898 2.7e-103 379.8 380 55.8
Sabra02G0136200 Salix brachista HOM05D004986 ORTHO05D005898 5.9e-103 378.6 412 53.6
BraA09t36669Z Brassica rapa HOM05D004986 ORTHO05D005898 3.8e-102 375.9 404 55.4
BcaB04g20132 Brassica carinata HOM05D004986 ORTHO05D005898 1.1e-101 374.4 412 54.9
HPP92_007280 Vanilla planifolia HOM05D004986 ORTHO05D005898 2.8e-100 369.8 420 49.8
Zm00001eb072790 Zea mays HOM05D004986 ORTHO05D005898 6.1e-100 368.6 413 49.9
AUR62006055 Chenopodium quinoa HOM05D004986 ORTHO05D005898 6.3e-97 358.6 401 49.6
MBI13_g20494_MAGBIO Magnolia biondii HOM05D004986 ORTHO05D005898 7.8e-95 351.7 466 46.1
Hma1.2p1_0085F.1_g044460 Hydrangea macrophylla HOM05D004986 ORTHO05D005898 6.6e-94 348.6 279 63.8
Potri.002G177100 Populus trichocarpa HOM05D004986 ORTHO05D005898 4.3e-93 345.9 315 60.3
Psat0s3210g0040 Pisum sativum HOM05D004986 ORTHO05D005898 5.8e-90 335.5 299 57.5
CARHR281810 Cardamine hirsuta HOM05D004986 ORTHO05D005898 1.1e-85 321.2 273 60.4
COL.COLO4_34271 Corchorus olitorius HOM05D004986 ORTHO05D005898 7.3e-85 318.5 405 46.7
ATR0807G113 Amborella trichopoda HOM05D004986 ORTHO05D005898 3.1e-83 313.2 454 43.4
Sc05g0009010 Simmondsia chinensis HOM05D004986 ORTHO05D005898 5.2e-83 312.4 357 50.1
Potri.007G064500 Populus trichocarpa HOM05D004986 ORTHO05D005898 7.1e-80 302.0 380 47.9
Mapoly0024s0125 Marchantia polymorpha HOM05D004986 ORTHO05D005898 9.2e-80 301.6 423 42.3
SEGI_13138 Sequoiadendron giganteum HOM05D004986 ORTHO05D005898 9.2e-80 301.6 403 43.4
Atru.chr3.37 Acer truncatum HOM05D004986 ORTHO05D005898 8.1e-76 288.5 422 42.7
Dinv40206 Davidia involucrata HOM05D004986 ORTHO05D005898 3.4e-74 283.1 261 60.2
Oeu037412.2 Olea europaea HOM05D004986 ORTHO05D005898 9.2e-72 275.0 409 44.0
CDE04G0629 Ceratophyllum demersum HOM05D004986 ORTHO05D005898 1.1e-69 268.1 409 43.5
Pp3c17_5460 Physcomitrium patens HOM05D004986 ORTHO05D005898 1.8e-67 260.8 456 38.4
AagrBONN_evm.TU.Sc2ySwM_362.836 Anthoceros agrestis HOM05D004986 ORTHO05D005898 1.5e-66 257.7 461 36.2
Lj4g0017944 Lotus japonicus HOM05D004986 ORTHO05D005898 5.8e-66 255.8 370 43.8
SMO147G0325 Selaginella moellendorffii HOM05D004986 ORTHO05D005898 3.0e-62 243.4 418 39.0
HanXRQChr13g0388311 Helianthus annuus HOM05D004986 ORTHO05D005898 1.5e-53 214.5 222 52.7
MD02G1112100 Malus domestica HOM05D004986 ORTHO05D005898 7.3e-53 212.2 179 58.7
HanXRQChr13g0388301 Helianthus annuus HOM05D004986 ORTHO05D005898 5.3e-51 206.1 181 56.4
CDE07G1230 Ceratophyllum demersum HOM05D004986 ORTHO05D005898 2.0e-50 204.1 284 42.3
Sed0024004 Sechium edule HOM05D004986 ORTHO05D005898 3.4e-50 203.4 313 42.8
MD02G1109300 Malus domestica HOM05D004986 ORTHO05D005898 1.8e-43 181.0 180 51.7
MD02G1113000 Malus domestica HOM05D004986 ORTHO05D005898 5.8e-42 176.0 158 56.3
AUR62035574 Chenopodium quinoa HOM05D004986 ORTHO05D005898 2.3e-38 164.1 177 46.9
Atru.chr3.32 Acer truncatum HOM05D004986 ORTHO05D005898 7.4e-37 159.1 179 55.9
Atru.chr3.33 Acer truncatum HOM05D004986 ORTHO05D005898 1.3e-36 158.3 108 65.7
SGA_v2.0_scaffold578G53029 Striga asiatica HOM05D004986 ORTHO05D005898 3.7e-36 156.8 198 49.5
CBR_g24177 Chara braunii HOM05D004986 ORTHO05D005898 5.1e-30 136.3 321 34.6
MD02G1113100 Malus domestica HOM05D004986 ORTHO05D005898 2.0e-26 124.4 180 46.7
TPR.G33051 Trifolium pratense HOM05D004986 ORTHO05D005898 5.9e-26 122.9 91 63.7
MD02G1112600 Malus domestica HOM05D004986 ORTHO05D005898 3.1e-19 100.5 155 38.7
MBI15_g18235_MAGBIO Magnolia biondii HOM05D004986 ORTHO05D005898 2.7e-15 87.4 118 44.1
MD02G1112300 Malus domestica HOM05D004986 ORTHO05D005898 2.7e-15 87.4 90 47.8
Zm00001eb338840 Zea mays HOM05D004986 ORTHO05D005898 3.9e-14 83.6 70 60.0
Zm00001eb355160 Zea mays HOM05D004986 ORTHO05D005898 5.1e-14 83.2 70 60.0
CARHR281800 Cardamine hirsuta HOM05D004986 ORTHO05D005898 1.5e-13 81.6 50 80.0
arahy.Tifrunner.gnm1.ann1.06FJIN Arachis hypogaea HOM05D004986 ORTHO05D005898 4.4e-13 80.1 51 76.5
arahy.Tifrunner.gnm1.ann1.757MF4 Arachis hypogaea HOM05D004986 ORTHO05D005898 4.4e-13 80.1 51 76.5
CDE04G2304 Ceratophyllum demersum HOM05D004986 ORTHO05D005898 1.7e-09 68.2 160 36.2
arahy.Tifrunner.gnm1.ann1.864E1P Arachis hypogaea HOM05D004986 ORTHO05D005898 1.9e-08 64.7 114 44.7
arahy.Tifrunner.gnm1.ann1.GJAM3K Arachis hypogaea HOM05D004986 ORTHO05D005898 1.9e-08 64.7 114 44.7


User provided reference genes

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