Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Eucgr.I02199 Eucalyptus grandis HOM05D007735 ORTHO05D009638 8.4e-77 290.4 163 100.0
Manes.01G157700 Manihot esculenta HOM05D007735 ORTHO05D009638 7.3e-20 101.3 152 44.7
Potri.011G145200 Populus trichocarpa HOM05D007735 ORTHO05D009638 1.2e-19 100.5 156 44.9
QL06p053348 Quercus lobata HOM05D007735 ORTHO05D009638 1.8e-18 96.7 154 41.6
Potri.001G456700 Populus trichocarpa HOM05D007735 ORTHO05D009638 3.1e-18 95.9 134 48.5
Sabra16G0309000 Salix brachista HOM05D007735 ORTHO05D009638 2.0e-17 93.2 128 47.7
Eucgr.J02566 Eucalyptus grandis HOM05D007735 ORTHO05D009638 3.4e-17 92.4 136 46.3
CSS0016261 Camellia sinensis var. sinensis HOM05D007735 ORTHO05D009638 1.3e-16 90.5 151 39.7
Oeu043409.2 Olea europaea HOM05D007735 ORTHO05D009638 1.3e-16 90.5 133 42.1
Cc07_g12240 Coffea canephora HOM05D007735 ORTHO05D009638 1.7e-16 90.1 151 41.1
Sabra11G0130300 Salix brachista HOM05D007735 ORTHO05D009638 2.2e-16 89.7 144 45.1
Nn5g31061 Nelumbo nucifera HOM05D007735 ORTHO05D009638 3.7e-16 89.0 146 41.8
Thecc.01G001800 Theobroma cacao HOM05D007735 ORTHO05D009638 8.3e-16 87.8 161 41.6
Prupe.7G187700 Prunus persica HOM05D007735 ORTHO05D009638 1.1e-15 87.4 151 41.1
TAR381G1223 Trochodendron aralioides HOM05D007735 ORTHO05D009638 1.9e-15 86.7 147 42.9
FvH4_1g09950 Fragaria vesca HOM05D007735 ORTHO05D009638 2.4e-15 86.3 153 39.9
FAN19G1654 Fragaria x ananassa HOM05D007735 ORTHO05D009638 2.4e-15 86.3 153 39.9
Oeu045753.2 Olea europaea HOM05D007735 ORTHO05D009638 2.4e-15 86.3 149 40.3
Cfa007115 Carpinus fangiana HOM05D007735 ORTHO05D009638 5.4e-15 85.1 138 42.8
Sopen02g026900 Solanum pennellii HOM05D007735 ORTHO05D009638 7.0e-15 84.7 152 42.1
FAN23G3070 Fragaria x ananassa HOM05D007735 ORTHO05D009638 9.2e-15 84.3 149 40.9
PGSC0003DMG400013637 Solanum tuberosum HOM05D007735 ORTHO05D009638 2.0e-14 83.2 152 40.1
Solyc02g082240.1 Solanum lycopersicum HOM05D007735 ORTHO05D009638 2.7e-14 82.8 152 41.4
FAN28G1635 Fragaria x ananassa HOM05D007735 ORTHO05D009638 4.6e-14 82.0 153 39.2
Manes.02G117000 Manihot esculenta HOM05D007735 ORTHO05D009638 3.0e-13 79.3 146 41.1
RcHm_v2.0_Chr2g0096741 Rosa chinensis HOM05D007735 ORTHO05D009638 3.9e-13 79.0 149 38.9
Gohir.D04G020900 Gossypium hirsutum HOM05D007735 ORTHO05D009638 6.6e-13 78.2 158 36.7
Nitab4.5_0000855g0160 Nicotiana tabacum HOM05D007735 ORTHO05D009638 8.6e-13 77.8 153 38.6
Sc03g0004120 Simmondsia chinensis HOM05D007735 ORTHO05D009638 1.1e-12 77.4 143 35.7
Nitab4.5_0004448g0030 Nicotiana tabacum HOM05D007735 ORTHO05D009638 1.5e-12 77.0 155 39.4
Glyma.09G195900 Glycine max HOM05D007735 ORTHO05D009638 4.3e-12 75.5 136 37.5
Gorai.012G025100 Gossypium raimondii HOM05D007735 ORTHO05D009638 4.3e-12 75.5 158 36.7
Glyma.16G114400 Glycine max HOM05D007735 ORTHO05D009638 5.6e-12 75.1 154 35.1
Lsat_1_v5_gn_2_74220 Lactuca sativa HOM05D007735 ORTHO05D009638 5.6e-12 75.1 149 41.6
Gohir.A05G393900 Gossypium hirsutum HOM05D007735 ORTHO05D009638 7.3e-12 74.7 158 35.4
Nitab4.5_0006309g0010 Nicotiana tabacum HOM05D007735 ORTHO05D009638 7.3e-12 74.7 139 41.0
CSS0025501 Camellia sinensis var. sinensis HOM05D007735 ORTHO05D009638 1.2e-11 73.9 151 39.1
Cpa.g.sc6.350 Carica papaya HOM05D007735 ORTHO05D009638 1.6e-11 73.6 131 43.5
Sed0019252 Sechium edule HOM05D007735 ORTHO05D009638 1.6e-11 73.6 144 38.2
FAN26G0974 Fragaria x ananassa HOM05D007735 ORTHO05D009638 2.1e-11 73.2 141 39.0
Glyma.01G156500 Glycine max HOM05D007735 ORTHO05D009638 6.2e-11 71.6 153 34.6
Peaxi162Scf00918g00052 Petunia axillaris HOM05D007735 ORTHO05D009638 8.0e-11 71.2 152 36.8
FAN23G2983 Fragaria x ananassa HOM05D007735 ORTHO05D009638 1.1e-10 70.9 141 38.3
Phvul.002G119100 Phaseolus vulgaris HOM05D007735 ORTHO05D009638 1.1e-10 70.9 153 35.3
DCAR_014121 Daucus carota HOM05D007735 ORTHO05D009638 1.4e-10 70.5 143 44.8
DCAR_014122 Daucus carota HOM05D007735 ORTHO05D009638 1.4e-10 70.5 143 44.8
TPR.G19311 Trifolium pratense HOM05D007735 ORTHO05D009638 1.4e-10 70.5 130 38.5
SGA_v2.0_scaffold2G00933 Striga asiatica HOM05D007735 ORTHO05D009638 1.8e-10 70.1 148 37.8
SGA_v2.0_scaffold108G30951 Striga asiatica HOM05D007735 ORTHO05D009638 3.1e-10 69.3 132 37.1
Nn6g31607 Nelumbo nucifera HOM05D007735 ORTHO05D009638 4.0e-10 68.9 128 39.1
ECA246G0225 Erigeron canadensis HOM05D007735 ORTHO05D009638 1.5e-09 67.0 157 37.6
PGSC0003DMG400015147 Solanum tuberosum HOM05D007735 ORTHO05D009638 2.0e-09 66.6 129 36.4
PGSC0003DMG400018690 Solanum tuberosum HOM05D007735 ORTHO05D009638 3.4e-09 65.9 150 35.3
Lalb_Chr16g0380221 Lupinus albus HOM05D007735 ORTHO05D009638 4.4e-09 65.5 159 32.7
Lsat_1_v5_gn_8_114121 Lactuca sativa HOM05D007735 ORTHO05D009638 7.5e-09 64.7 130 37.7
Psat4g107200 Pisum sativum HOM05D007735 ORTHO05D009638 9.8e-09 64.3 141 35.5
VMungo1215G0699 Vigna mungo HOM05D007735 ORTHO05D009638 9.8e-09 64.3 154 35.1
Aqoxy6G03024 Aquilegia oxysepala HOM05D007735 ORTHO05D009638 1.3e-08 63.9 152 35.5
CsaV3_3G000130 Cucumis sativus L. HOM05D007735 ORTHO05D009638 2.2e-08 63.2 122 35.2
CsaV3_UNG155170 Cucumis sativus L. HOM05D007735 ORTHO05D009638 2.2e-08 63.2 122 35.2
Lalb_Chr05g0214991 Lupinus albus HOM05D007735 ORTHO05D009638 2.9e-08 62.8 131 34.4
Medtr8g072610 Medicago truncatula HOM05D007735 ORTHO05D009638 2.9e-08 62.8 130 36.2
Lsat_1_v5_gn_8_114101 Lactuca sativa HOM05D007735 ORTHO05D009638 6.4e-08 61.6 138 37.7
Lj2g0017807 Lotus japonicus HOM05D007735 ORTHO05D009638 6.4e-08 61.6 159 30.8
Phvul.003G272000 Phaseolus vulgaris HOM05D007735 ORTHO05D009638 1.4e-07 60.5 131 32.1
Lalb_Chr05g0229481 Lupinus albus HOM05D007735 ORTHO05D009638 1.9e-07 60.1 138 30.4
Glyma.11G088300 Glycine max HOM05D007735 ORTHO05D009638 2.4e-07 59.7 154 31.2
VMungo0251G0553 Vigna mungo HOM05D007735 ORTHO05D009638 4.1e-07 58.9 142 31.0
TPR.G33757 Trifolium pratense HOM05D001957 ORTHO05D002015 1.2e-06 57.4 137 32.8
LjContig00247g0020335 Lotus japonicus HOM05D007735 ORTHO05D009638 1.6e-06 57.0 157 31.8
MELO3C013706.2 Cucumis melo HOM05D007735 ORTHO05D009638 2.7e-06 56.2 124 35.5
Lsat_1_v5_gn_3_69161 Lactuca sativa HOM05D007735 ORTHO05D009638 2.7e-06 56.2 155 34.8
Lalb_Chr09g0324871 Lupinus albus HOM05D007735 ORTHO05D009638 2.7e-06 56.2 153 28.8
Ca_25020_v3 Cicer arietinum L. HOM05D007735 ORTHO05D009638 6.0e-06 55.1 158 33.5
Psat2g147360 Pisum sativum HOM05D007735 ORTHO05D009638 6.0e-06 55.1 137 31.4


User provided reference genes

Program Settings