Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Eucgr.I02107 Eucalyptus grandis HOM05D006790 ORTHO05D007715 1.4e-190 669.5 330 100.0
Eucgr.I02105 Eucalyptus grandis HOM05D006790 ORTHO05D007715 9.9e-117 424.1 248 85.9
GSVIVG01036474001 Vitis vinifera HOM05D006790 ORTHO05D007715 2.7e-66 256.5 310 45.2
CiPaw.04G004400 Carya illinoinensis HOM05D006790 ORTHO05D007715 8.8e-65 251.5 312 46.5
Duzib268G0872 Durio zibethinus HOM05D006790 ORTHO05D007715 9.7e-64 248.1 315 46.7
Potri.004G106000 Populus trichocarpa HOM05D006790 ORTHO05D007715 4.8e-63 245.7 312 46.2
Dinv33908 Davidia involucrata HOM05D006790 ORTHO05D007715 6.3e-63 245.4 304 46.4
PGR004G2315 Punica granatum HOM05D006790 ORTHO05D007715 1.8e-62 243.8 317 43.5
Thecc.07G120400 Theobroma cacao HOM05D006790 ORTHO05D007715 3.1e-62 243.0 314 45.9
Atru.chr8.778 Acer truncatum HOM05D006790 ORTHO05D007715 3.2e-59 233.0 310 44.5
TWI53G1762 Tripterygium wilfordii HOM05D006790 ORTHO05D007715 6.1e-58 228.8 321 44.9
Manes.01G107100 Manihot esculenta HOM05D006790 ORTHO05D007715 1.8e-57 227.3 307 44.6
QL02p053561 Quercus lobata HOM05D006790 ORTHO05D007715 5.2e-57 225.7 301 45.5
MD17G1072100 Malus domestica HOM05D006790 ORTHO05D007715 2.6e-56 223.4 326 43.9
Gohir.A13G150200 Gossypium hirsutum HOM05D006790 ORTHO05D007715 5.7e-56 222.2 313 45.4
Prupe.3G242700 Prunus persica HOM05D006790 ORTHO05D007715 7.5e-56 221.9 324 42.9
Nn3g17634 Nelumbo nucifera HOM05D006790 ORTHO05D007715 2.8e-55 219.9 303 41.3
CSS0027059 Camellia sinensis var. sinensis HOM05D006790 ORTHO05D007715 2.4e-54 216.9 305 42.3
Gorai.013G174500 Gossypium raimondii HOM05D006790 ORTHO05D007715 2.4e-54 216.9 313 44.4
Haze_14092 Corylus avellana HOM05D006790 ORTHO05D007715 1.6e-53 214.2 276 43.8
Gohir.D13G154500 Gossypium hirsutum HOM05D006790 ORTHO05D007715 5.9e-53 212.2 313 44.1
Cfa007981 Carpinus fangiana HOM05D006790 ORTHO05D007715 2.9e-52 209.9 273 44.0
ClCG05G011930 Citrullus lanatus HOM05D006790 ORTHO05D007715 5.0e-52 209.1 297 41.8
Hma1.2p1_0588F.1_g184410 Hydrangea macrophylla HOM05D006790 ORTHO05D007715 6.5e-52 208.8 196 51.5
Ciclev10011421m.g Citrus clementina HOM05D006790 ORTHO05D007715 8.5e-52 208.4 315 42.5
Actinidia36298 Actinidia chinensis HOM05D006790 ORTHO05D007715 1.0e-49 201.4 291 42.3
Migut.H00551 Erythranthe guttata HOM05D006790 ORTHO05D007715 8.8e-49 198.4 192 52.6
Sed0013505 Sechium edule HOM05D006790 ORTHO05D007715 8.8e-49 198.4 284 41.9
Glyma.19G042100 Glycine max HOM05D006790 ORTHO05D007715 3.4e-48 196.4 318 38.1
MELO3C023782.2 Cucumis melo HOM05D006790 ORTHO05D007715 9.8e-48 194.9 169 55.6
MSTRG.2949 Avicennia marina HOM05D006790 ORTHO05D007715 1.4e-46 191.0 328 38.7
THA.LOC104822671 Tarenaya hassleriana HOM05D006790 ORTHO05D007715 2.4e-46 190.3 321 38.6
Aqoxy3G03826 Aquilegia oxysepala HOM05D006790 ORTHO05D007715 7.0e-46 188.7 331 38.7
Peaxi162Scf00019g00104 Petunia axillaris HOM05D006790 ORTHO05D007715 9.1e-46 188.3 293 37.9
CsaV3_3G020510 Cucumis sativus L. HOM05D006790 ORTHO05D007715 1.2e-45 188.0 302 42.1
Hund19591 Selenicereus undatus HOM05D006790 ORTHO05D007715 2.7e-45 186.8 275 41.5
Rhsim10G0065300 Rhododendron simsii HOM05D006790 ORTHO05D007715 7.7e-45 185.3 311 37.6
Sabra04G0076300 Salix brachista HOM05D001314 ORTHO05D001165 1.0e-44 184.9 276 44.6
Nitab4.5_0004656g0020 Nicotiana tabacum HOM05D006790 ORTHO05D007715 1.7e-44 184.1 282 37.9
HanXRQChr14g0448141 Helianthus annuus HOM05D006790 ORTHO05D007715 3.8e-44 183.0 153 56.9
Thhalv10018524m.g Eutrema salsugineum HOM05D006790 ORTHO05D007715 5.0e-44 182.6 290 39.3
Cc07_g04880 Coffea canephora HOM05D006790 ORTHO05D007715 1.5e-43 181.0 285 38.9
AUR62031597 Chenopodium quinoa HOM05D006790 ORTHO05D007715 1.9e-43 180.6 306 37.3
AUR62012471 Chenopodium quinoa HOM05D006790 ORTHO05D007715 3.3e-43 179.9 306 36.6
CANSAT64G1240 Cannabis sativa HOM05D006790 ORTHO05D007715 5.5e-43 179.1 281 38.4
CiPaw.03G006800 Carya illinoinensis HOM05D006790 ORTHO05D007715 9.5e-43 178.3 277 41.2
Sp5g22110 Schrenkiella parvula HOM05D006790 ORTHO05D007715 1.2e-42 177.9 292 39.7
Aa31LG2G3550 Aethionema arabicum HOM05D006790 ORTHO05D007715 1.6e-42 177.6 283 39.6
Sopen02g015820 Solanum pennellii HOM05D006790 ORTHO05D007715 1.6e-42 177.6 289 37.4
PSO063G5157 Papaver somniferum HOM05D006790 ORTHO05D007715 4.7e-42 176.0 333 35.7
Phvul.004G048500 Phaseolus vulgaris HOM05D006790 ORTHO05D007715 4.7e-42 176.0 316 35.8
Solyc02g065620.3 Solanum lycopersicum HOM05D006790 ORTHO05D007715 4.7e-42 176.0 291 37.5
Lsat_1_v5_gn_2_86460 Lactuca sativa HOM05D006790 ORTHO05D007715 8.0e-42 175.3 276 40.6
PGSC0003DMG400026556 Solanum tuberosum HOM05D006790 ORTHO05D007715 2.3e-41 173.7 284 36.6
Ah.09g229220 Amaranthus hybridus HOM05D006790 ORTHO05D007715 3.0e-41 173.3 278 38.8
RcHm_v2.0_Chr2g0163811 Rosa chinensis HOM05D006790 ORTHO05D007715 3.0e-41 173.3 290 38.6
Cpa.g.sc179.51 Carica papaya HOM05D006790 ORTHO05D007715 5.2e-41 172.6 314 37.6
Sc23g0006450 Simmondsia chinensis HOM05D006790 ORTHO05D007715 6.8e-41 172.2 284 39.1
FAN02G3906 Fragaria x ananassa HOM05D006790 ORTHO05D007715 8.9e-41 171.8 290 41.7
Carub.0002s1345 Capsella rubella HOM05D006790 ORTHO05D007715 1.2e-40 171.4 283 38.5
PSO782G2169 Papaver somniferum HOM05D006790 ORTHO05D007715 2.0e-40 170.6 332 34.6
BcaB05g24242 Brassica carinata HOM05D006790 ORTHO05D007715 2.6e-40 170.2 294 38.4
VMungo0464G1394 Vigna mungo HOM05D006790 ORTHO05D007715 3.4e-40 169.9 318 35.2
EL10Ac2g04125 Beta vulgaris HOM05D006790 ORTHO05D007715 4.4e-40 169.5 292 37.0
vmacro05586 Vaccinium macrocarpon HOM05D006790 ORTHO05D007715 5.7e-40 169.1 240 40.4
AL2G25680 Arabidopsis lyrata HOM05D006790 ORTHO05D007715 9.8e-40 168.3 296 36.8
A02p14030 Brassica napus HOM05D006790 ORTHO05D007715 9.8e-40 168.3 293 36.5
C02p22620 Brassica napus HOM05D006790 ORTHO05D007715 1.3e-39 167.9 295 38.0
Zm00001eb178960 Zea mays HOM05D006790 ORTHO05D007715 1.3e-39 167.9 133 60.2
CAN.G93.39 Capsicum annuum HOM05D006790 ORTHO05D007715 1.7e-39 167.5 282 37.2
CSS0043876 Camellia sinensis var. sinensis HOM05D006790 ORTHO05D007715 2.2e-39 167.2 274 39.8
arahy.Tifrunner.gnm1.ann1.9J9R5Y Arachis hypogaea HOM05D006790 ORTHO05D007715 2.9e-39 166.8 311 37.3
BcaC03g14811 Brassica carinata HOM05D006790 ORTHO05D007715 2.9e-39 166.8 296 38.2
Os08g0414200 Oryza sativa ssp. japonica HOM05D006790 ORTHO05D007715 3.7e-39 166.4 133 57.9
Medtr6g016895 Medicago truncatula HOM05D006790 ORTHO05D007715 4.9e-39 166.0 315 36.2
BraA02t06464Z Brassica rapa HOM05D006790 ORTHO05D007715 1.1e-38 164.9 290 38.6
Lalb_Chr02g0158421 Lupinus albus HOM05D006790 ORTHO05D007715 1.1e-38 164.9 305 38.0
CARHR059630 Cardamine hirsuta HOM05D006790 ORTHO05D007715 1.8e-38 164.1 294 37.4
SGA_v2.0_scaffold204G41662 Striga asiatica HOM05D006790 ORTHO05D007715 3.2e-38 163.3 196 46.4
AT1G67180 Arabidopsis thaliana HOM05D006790 ORTHO05D007715 4.1e-38 162.9 297 36.7
Psat1g062760 Pisum sativum HOM05D006790 ORTHO05D007715 4.1e-38 162.9 315 35.9
BolC2t08416H Brassica oleracea HOM05D006790 ORTHO05D007715 7.0e-38 162.2 298 37.6
arahy.Tifrunner.gnm1.ann1.3TKD3Z Arachis hypogaea HOM05D006790 ORTHO05D007715 9.2e-38 161.8 312 37.5
HPP92_018029 Vanilla planifolia HOM05D006790 ORTHO05D007715 1.6e-37 161.0 178 47.2
TPR.G9681 Trifolium pratense HOM05D006790 ORTHO05D007715 2.3e-36 157.1 313 34.2
Lalb_Chr21g0318021 Lupinus albus HOM05D006790 ORTHO05D007715 2.9e-36 156.8 308 36.4
ECA238G0674 Erigeron canadensis HOM05D000337 ORTHO05D007715 2.5e-35 153.7 275 35.6
Zm00001eb042310 Zea mays HOM05D006790 ORTHO05D007715 9.5e-35 151.8 136 55.1
MBI14_g10506_MAGBIO Magnolia biondii HOM05D006790 ORTHO05D007715 1.2e-34 151.4 288 36.1
Ca_20731_v3 Cicer arietinum L. HOM05D005714 ORTHO05D006812 8.0e-34 148.7 176 46.0
Oeu025124.3 Olea europaea HOM05D006790 ORTHO05D007715 6.8e-33 145.6 245 40.0
ATR0691G168 Amborella trichopoda HOM05D006790 ORTHO05D007715 5.8e-32 142.5 183 43.2
DCAR_007524 Daucus carota HOM05D000337 ORTHO05D007715 5.4e-30 136.0 151 47.7
Nitab4.5_0001324g0030 Nicotiana tabacum HOM05D006790 ORTHO05D007715 7.8e-29 132.1 289 33.2
Lj2g0010226 Lotus japonicus HOM05D006790 ORTHO05D007715 3.0e-28 130.2 306 31.7
Lj2g0002333 Lotus japonicus HOM05D006790 ORTHO05D007715 3.3e-27 126.7 317 30.6
FAN09G4784 Fragaria x ananassa HOM05D006790 ORTHO05D007715 9.5e-27 125.2 251 39.4
FvH4_6g45660 Fragaria vesca HOM05D006790 ORTHO05D007715 1.2e-26 124.8 244 40.6
FAN14G5652 Fragaria x ananassa HOM05D006790 ORTHO05D007715 1.2e-26 124.8 248 38.7
TAR371G0767 Trochodendron aralioides HOM05D006790 ORTHO05D007715 2.8e-26 123.6 98 60.2
BcaNung06915 Brassica carinata HOM05D006790 ORTHO05D007715 3.1e-25 120.2 282 34.4
FAN05G5467 Fragaria x ananassa HOM05D006790 ORTHO05D007715 3.1e-25 120.2 244 38.9
Lj7A8G41 Lonicera japonica HOM05D006790 ORTHO05D007715 1.1e-22 111.7 97 56.7
Peaxi162Scf00019g00411 Petunia axillaris HOM05D006790 ORTHO05D007715 2.4e-22 110.5 273 34.8
Mapoly0081s0071 Marchantia polymorpha HOM05D006790 ORTHO05D007715 1.6e-18 97.8 150 37.3
SMO141G0131 Selaginella moellendorffii HOM05D006790 ORTHO05D007715 1.4e-17 94.7 142 37.3
SMO170G0045 Selaginella moellendorffii HOM05D006790 ORTHO05D007715 1.8e-17 94.4 142 37.3
SHI25900 Sapria himalayana HOM05D006790 ORTHO05D007715 4.4e-16 89.7 73 58.9
Lj7A8G40 Lonicera japonica HOM05D006790 ORTHO05D007715 1.9e-14 84.3 205 33.7
Actinidia18110 Actinidia chinensis HOM05D006790 ORTHO05D007715 3.3e-11 73.6 191 31.4
AagrBONN_evm.TU.Sc2ySwM_117.2827 Anthoceros agrestis HOM05D006790 ORTHO05D007715 2.8e-10 70.5 134 34.3
Pp3c17_13020 Physcomitrium patens HOM05D006790 ORTHO05D007715 3.1e-09 67.0 136 37.5
Pp3c2_37790 Physcomitrium patens HOM05D002798 ORTHO05D003052 1.7e-07 61.2 135 33.3
HanXRQChr15g0466321 Helianthus annuus HOM05D002798 ORTHO05D003052 6.4e-07 59.3 132 31.1
SGA_v2.0_scaffold4G01966 Striga asiatica HOM05D002798 ORTHO05D003052 6.4e-07 59.3 131 31.3
Nn4g25695 Nelumbo nucifera HOM05D002798 ORTHO05D003052 1.1e-06 58.5 132 33.3
ECA236G2114 Erigeron canadensis HOM05D002798 ORTHO05D003052 1.4e-06 58.2 132 31.1
HPP92_006898 Vanilla planifolia HOM05D002798 ORTHO05D003052 2.4e-06 57.4 132 33.3
Nitab4.5_0002715g0130 Nicotiana tabacum HOM05D002798 ORTHO05D003052 3.2e-06 57.0 132 31.1
HPP92_001068 Vanilla planifolia HOM05D002798 ORTHO05D003052 5.4e-06 56.2 133 32.3
TWI56G0232 Tripterygium wilfordii HOM05D002798 ORTHO05D003052 9.3e-06 55.5 131 32.1


User provided reference genes

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