Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Eucgr.I02105 Eucalyptus grandis HOM05D006790 ORTHO05D007715 4.8e-140 501.1 248 100.0
Eucgr.I02107 Eucalyptus grandis HOM05D006790 ORTHO05D007715 6.3e-116 421.0 248 85.9
GSVIVG01036474001 Vitis vinifera HOM05D006790 ORTHO05D007715 5.8e-45 185.3 252 42.9
Dinv33908 Davidia involucrata HOM05D006790 ORTHO05D007715 1.7e-44 183.7 252 42.9
Duzib268G0872 Durio zibethinus HOM05D006790 ORTHO05D007715 3.8e-44 182.6 248 44.4
Thecc.07G120400 Theobroma cacao HOM05D006790 ORTHO05D007715 3.2e-43 179.5 248 44.0
CiPaw.04G004400 Carya illinoinensis HOM05D006790 ORTHO05D007715 4.3e-40 169.1 253 40.7
PGR004G2315 Punica granatum HOM05D006790 ORTHO05D007715 1.6e-39 167.2 252 39.7
TWI53G1762 Tripterygium wilfordii HOM05D006790 ORTHO05D007715 4.8e-39 165.6 249 42.2
vmacro05586 Vaccinium macrocarpon HOM05D006790 ORTHO05D007715 6.2e-39 165.2 225 40.4
Actinidia36298 Actinidia chinensis HOM05D006790 ORTHO05D007715 2.4e-38 163.3 205 44.9
Manes.01G107100 Manihot esculenta HOM05D006790 ORTHO05D007715 9.0e-38 161.4 246 41.1
Atru.chr8.778 Acer truncatum HOM05D006790 ORTHO05D007715 1.2e-37 161.0 236 41.1
Prupe.3G242700 Prunus persica HOM05D006790 ORTHO05D007715 5.8e-37 158.7 211 46.4
Sabra04G0076300 Salix brachista HOM05D001314 ORTHO05D001165 7.6e-37 158.3 237 43.9
Potri.004G106000 Populus trichocarpa HOM05D006790 ORTHO05D007715 1.7e-36 157.1 258 39.9
CSS0027059 Camellia sinensis var. sinensis HOM05D006790 ORTHO05D007715 3.8e-36 156.0 236 40.3
CSS0043876 Camellia sinensis var. sinensis HOM05D006790 ORTHO05D007715 4.9e-36 155.6 218 41.7
Ciclev10011421m.g Citrus clementina HOM05D006790 ORTHO05D007715 8.4e-36 154.8 196 45.4
CiPaw.03G006800 Carya illinoinensis HOM05D006790 ORTHO05D007715 1.4e-35 154.1 233 40.8
Haze_14092 Corylus avellana HOM05D006790 ORTHO05D007715 1.4e-35 154.1 222 40.1
Gohir.A13G150200 Gossypium hirsutum HOM05D006790 ORTHO05D007715 2.5e-35 153.3 248 40.7
Gorai.013G174500 Gossypium raimondii HOM05D006790 ORTHO05D007715 2.5e-35 153.3 250 40.8
Cfa007981 Carpinus fangiana HOM05D006790 ORTHO05D007715 3.2e-35 152.9 143 53.8
MD17G1072100 Malus domestica HOM05D006790 ORTHO05D007715 4.2e-35 152.5 254 40.9
Migut.H00551 Erythranthe guttata HOM05D006790 ORTHO05D007715 5.5e-35 152.1 173 49.1
Hund19591 Selenicereus undatus HOM05D006790 ORTHO05D007715 7.1e-35 151.8 138 52.9
Hma1.2p1_0588F.1_g184410 Hydrangea macrophylla HOM05D006790 ORTHO05D007715 9.3e-35 151.4 171 46.2
QL02p053561 Quercus lobata HOM05D006790 ORTHO05D007715 9.3e-35 151.4 254 40.2
Nn3g17634 Nelumbo nucifera HOM05D006790 ORTHO05D007715 2.7e-34 149.8 246 37.4
Gohir.D13G154500 Gossypium hirsutum HOM05D006790 ORTHO05D007715 6.0e-34 148.7 250 40.4
Sed0013505 Sechium edule HOM05D006790 ORTHO05D007715 6.0e-34 148.7 251 38.2
ClCG05G011930 Citrullus lanatus HOM05D006790 ORTHO05D007715 1.8e-33 147.1 253 36.8
Rhsim10G0065300 Rhododendron simsii HOM05D006790 ORTHO05D007715 5.1e-33 145.6 215 39.1
Glyma.19G042100 Glycine max HOM05D006790 ORTHO05D007715 1.1e-32 144.4 218 40.4
Oeu025124.3 Olea europaea HOM05D006790 ORTHO05D007715 1.9e-32 143.7 157 47.8
MELO3C023782.2 Cucumis melo HOM05D006790 ORTHO05D007715 5.6e-32 142.1 154 48.1
Lsat_1_v5_gn_2_86460 Lactuca sativa HOM05D006790 ORTHO05D007715 5.6e-32 142.1 153 49.0
HanXRQChr14g0448141 Helianthus annuus HOM05D006790 ORTHO05D007715 9.6e-32 141.4 106 60.4
MSTRG.2949 Avicennia marina HOM05D006790 ORTHO05D007715 1.6e-31 140.6 198 41.9
CsaV3_3G020510 Cucumis sativus L. HOM05D006790 ORTHO05D007715 3.7e-31 139.4 183 43.2
Cc07_g04880 Coffea canephora HOM05D006790 ORTHO05D007715 4.8e-31 139.0 255 36.1
DCAR_007524 Daucus carota HOM05D000337 ORTHO05D007715 1.4e-30 137.5 100 63.0
THA.LOC104822671 Tarenaya hassleriana HOM05D006790 ORTHO05D007715 1.4e-30 137.5 190 41.1
CANSAT64G1240 Cannabis sativa HOM05D006790 ORTHO05D007715 1.8e-30 137.1 235 36.2
Nitab4.5_0004656g0020 Nicotiana tabacum HOM05D006790 ORTHO05D007715 1.8e-30 137.1 144 46.5
Nitab4.5_0001324g0030 Nicotiana tabacum HOM05D006790 ORTHO05D007715 2.4e-30 136.7 113 53.1
PSO782G2169 Papaver somniferum HOM05D006790 ORTHO05D007715 2.4e-30 136.7 134 48.5
ECA238G0674 Erigeron canadensis HOM05D000337 ORTHO05D007715 5.3e-30 135.6 212 39.2
PSO063G5157 Papaver somniferum HOM05D006790 ORTHO05D007715 9.0e-30 134.8 134 48.5
C02p22620 Brassica napus HOM05D006790 ORTHO05D007715 2.0e-29 133.7 110 57.3
BolC2t08416H Brassica oleracea HOM05D006790 ORTHO05D007715 2.0e-29 133.7 110 57.3
Thhalv10018524m.g Eutrema salsugineum HOM05D006790 ORTHO05D007715 2.0e-29 133.7 237 36.3
Peaxi162Scf00019g00104 Petunia axillaris HOM05D006790 ORTHO05D007715 2.6e-29 133.3 137 48.9
BcaC03g14811 Brassica carinata HOM05D006790 ORTHO05D007715 4.5e-29 132.5 220 38.6
MBI14_g10506_MAGBIO Magnolia biondii HOM05D006790 ORTHO05D007715 5.8e-29 132.1 227 37.9
PGSC0003DMG400026556 Solanum tuberosum HOM05D006790 ORTHO05D007715 5.8e-29 132.1 145 45.5
EL10Ac2g04125 Beta vulgaris HOM05D006790 ORTHO05D007715 1.0e-28 131.3 148 45.3
Lalb_Chr02g0158421 Lupinus albus HOM05D006790 ORTHO05D007715 1.0e-28 131.3 213 38.5
VMungo0464G1394 Vigna mungo HOM05D006790 ORTHO05D007715 1.0e-28 131.3 220 37.3
A02p14030 Brassica napus HOM05D006790 ORTHO05D007715 1.3e-28 131.0 220 35.9
Phvul.004G048500 Phaseolus vulgaris HOM05D006790 ORTHO05D007715 1.7e-28 130.6 218 37.2
Sp5g22110 Schrenkiella parvula HOM05D006790 ORTHO05D007715 2.2e-28 130.2 240 37.1
Aqoxy3G03826 Aquilegia oxysepala HOM05D006790 ORTHO05D007715 3.8e-28 129.4 184 41.3
AUR62012471 Chenopodium quinoa HOM05D006790 ORTHO05D007715 3.8e-28 129.4 252 32.9
BcaB05g24242 Brassica carinata HOM05D006790 ORTHO05D007715 4.9e-28 129.0 220 38.2
Aa31LG2G3550 Aethionema arabicum HOM05D006790 ORTHO05D007715 6.5e-28 128.6 219 36.1
AUR62031597 Chenopodium quinoa HOM05D006790 ORTHO05D007715 6.5e-28 128.6 254 33.5
Solyc02g065620.3 Solanum lycopersicum HOM05D006790 ORTHO05D007715 6.5e-28 128.6 183 42.1
Sopen02g015820 Solanum pennellii HOM05D006790 ORTHO05D007715 6.5e-28 128.6 182 42.3
BraA02t06464Z Brassica rapa HOM05D006790 ORTHO05D007715 1.9e-27 127.1 218 35.3
Carub.0002s1345 Capsella rubella HOM05D006790 ORTHO05D007715 1.9e-27 127.1 146 44.5
RcHm_v2.0_Chr2g0163811 Rosa chinensis HOM05D006790 ORTHO05D007715 2.5e-27 126.7 223 39.5
Cpa.g.sc179.51 Carica papaya HOM05D006790 ORTHO05D007715 3.2e-27 126.3 221 36.7
Zm00001eb042310 Zea mays HOM05D006790 ORTHO05D007715 3.2e-27 126.3 96 60.4
Zm00001eb178960 Zea mays HOM05D006790 ORTHO05D007715 3.2e-27 126.3 124 52.4
Sc23g0006450 Simmondsia chinensis HOM05D006790 ORTHO05D007715 4.2e-27 125.9 251 33.5
AL2G25680 Arabidopsis lyrata HOM05D006790 ORTHO05D007715 7.1e-27 125.2 146 45.2
Lalb_Chr21g0318021 Lupinus albus HOM05D006790 ORTHO05D007715 7.1e-27 125.2 213 37.1
FAN14G5652 Fragaria x ananassa HOM05D006790 ORTHO05D007715 1.2e-26 124.4 221 37.1
Medtr6g016895 Medicago truncatula HOM05D006790 ORTHO05D007715 1.6e-26 124.0 209 35.4
AT1G67180 Arabidopsis thaliana HOM05D006790 ORTHO05D007715 2.1e-26 123.6 146 43.2
CARHR059630 Cardamine hirsuta HOM05D006790 ORTHO05D007715 2.7e-26 123.2 146 44.5
FvH4_6g45660 Fragaria vesca HOM05D006790 ORTHO05D007715 2.7e-26 123.2 219 37.0
Os08g0414200 Oryza sativa ssp. japonica HOM05D006790 ORTHO05D007715 2.7e-26 123.2 151 45.7
FAN02G3906 Fragaria x ananassa HOM05D006790 ORTHO05D007715 3.5e-26 122.9 224 37.9
FAN09G4784 Fragaria x ananassa HOM05D006790 ORTHO05D007715 4.6e-26 122.5 215 39.1
arahy.Tifrunner.gnm1.ann1.9J9R5Y Arachis hypogaea HOM05D006790 ORTHO05D007715 7.9e-26 121.7 168 41.1
CAN.G93.39 Capsicum annuum HOM05D006790 ORTHO05D007715 1.0e-25 121.3 181 38.1
HPP92_018029 Vanilla planifolia HOM05D006790 ORTHO05D007715 1.0e-25 121.3 135 45.2
Psat1g062760 Pisum sativum HOM05D006790 ORTHO05D007715 2.3e-25 120.2 216 37.5
Ah.09g229220 Amaranthus hybridus HOM05D006790 ORTHO05D007715 3.9e-25 119.4 257 33.9
arahy.Tifrunner.gnm1.ann1.3TKD3Z Arachis hypogaea HOM05D006790 ORTHO05D007715 6.7e-25 118.6 169 42.6
FAN05G5467 Fragaria x ananassa HOM05D006790 ORTHO05D007715 6.7e-25 118.6 215 38.6
ATR0691G168 Amborella trichopoda HOM05D006790 ORTHO05D007715 1.9e-24 117.1 132 47.7
SGA_v2.0_scaffold204G41662 Striga asiatica HOM05D006790 ORTHO05D007715 7.4e-24 115.2 174 41.4
Ca_20731_v3 Cicer arietinum L. HOM05D005714 ORTHO05D006812 6.3e-23 112.1 160 39.4
TPR.G9681 Trifolium pratense HOM05D006790 ORTHO05D007715 2.4e-22 110.2 236 33.1
Peaxi162Scf00019g00411 Petunia axillaris HOM05D006790 ORTHO05D007715 2.1e-18 97.1 148 39.9
Lj2g0010226 Lotus japonicus HOM05D006790 ORTHO05D007715 3.6e-18 96.3 156 36.5
BcaNung06915 Brassica carinata HOM05D006790 ORTHO05D007715 7.9e-18 95.1 220 33.2
Lj2g0002333 Lotus japonicus HOM05D006790 ORTHO05D007715 1.1e-16 91.3 156 37.2
SHI25900 Sapria himalayana HOM05D006790 ORTHO05D007715 5.3e-14 82.4 72 59.7
Lj7A8G40 Lonicera japonica HOM05D006790 ORTHO05D007715 9.1e-14 81.6 106 45.3
TAR371G0767 Trochodendron aralioides HOM05D006790 ORTHO05D007715 1.4e-11 74.3 87 47.1
Mapoly0081s0071 Marchantia polymorpha HOM05D006790 ORTHO05D007715 2.5e-11 73.6 80 47.5
SMO141G0131 Selaginella moellendorffii HOM05D006790 ORTHO05D007715 3.9e-09 66.2 84 42.9
SMO170G0045 Selaginella moellendorffii HOM05D006790 ORTHO05D007715 3.9e-09 66.2 84 42.9
Lj7A8G41 Lonicera japonica HOM05D006790 ORTHO05D007715 2.6e-08 63.5 82 45.1
Actinidia18110 Actinidia chinensis HOM05D006790 ORTHO05D007715 3.1e-06 56.6 143 30.8


User provided reference genes

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