Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Eucgr.I01987 Eucalyptus grandis HOM05D003972 ORTHO05D004609 9.6e-192 673.3 338 100.0
PGR044G2681 Punica granatum HOM05D003972 ORTHO05D004609 3.2e-46 189.9 142 67.6
PGR042G2196 Punica granatum HOM05D003972 ORTHO05D004609 2.4e-41 173.7 142 64.8
TWI09G1021 Tripterygium wilfordii HOM05D003972 ORTHO05D004609 2.4e-41 173.7 142 66.2
CSS0031611 Camellia sinensis var. sinensis HOM05D003972 ORTHO05D004609 5.3e-41 172.6 143 62.9
Thecc.01G411300 Theobroma cacao HOM05D003972 ORTHO05D004609 2.6e-40 170.2 142 66.9
Actinidia20668 Actinidia chinensis HOM05D003972 ORTHO05D004609 7.7e-40 168.7 143 61.5
ClCG09G004190 Citrullus lanatus HOM05D003972 ORTHO05D004609 7.7e-40 168.7 154 63.0
TWI73G1179 Tripterygium wilfordii HOM05D003972 ORTHO05D004609 1.3e-39 167.9 142 65.5
vmacro21185 Vaccinium macrocarpon HOM05D003972 ORTHO05D004609 5.0e-39 166.0 345 37.4
Duzib268G1708 Durio zibethinus HOM05D003972 ORTHO05D004609 8.5e-39 165.2 143 62.9
Prupe.2G012700 Prunus persica HOM05D003972 ORTHO05D004609 8.5e-39 165.2 143 62.2
Lsat_1_v5_gn_1_107400 Lactuca sativa HOM05D003972 ORTHO05D004609 3.2e-38 163.3 143 60.8
CsaV3_7G031080 Cucumis sativus L. HOM05D003972 ORTHO05D004609 5.5e-38 162.5 143 60.1
Migut.N01593 Erythranthe guttata HOM05D003972 ORTHO05D004609 5.5e-38 162.5 143 60.1
Lsat_1_v5_gn_1_107421 Lactuca sativa HOM05D003972 ORTHO05D004609 5.5e-38 162.5 142 61.3
RcHm_v2.0_Chr1g0315911 Rosa chinensis HOM05D003972 ORTHO05D004609 9.4e-38 161.8 142 63.4
COL.COLO4_23932 Corchorus olitorius HOM05D003972 ORTHO05D004609 1.2e-37 161.4 142 61.3
HanXRQChr01g0016231 Helianthus annuus HOM05D003972 ORTHO05D004609 1.2e-37 161.4 142 59.2
Gorai.008G105300 Gossypium raimondii HOM05D003972 ORTHO05D004609 1.6e-37 161.0 144 64.6
Manes.10G143400 Manihot esculenta HOM05D003972 ORTHO05D004609 2.1e-37 160.6 142 61.3
MELO3C023548.2 Cucumis melo HOM05D003972 ORTHO05D004609 2.7e-37 160.2 143 58.0
MD02G1312800 Malus domestica HOM05D003972 ORTHO05D004609 4.7e-37 159.5 143 62.2
Duzib138G0053 Durio zibethinus HOM05D003972 ORTHO05D004609 6.1e-37 159.1 144 62.5
Gohir.D12G096966 Gossypium hirsutum HOM05D003972 ORTHO05D004609 6.1e-37 159.1 144 63.9
MSTRG.5022 Avicennia marina HOM05D003972 ORTHO05D004609 8.0e-37 158.7 142 59.9
Gohir.A12G094100 Gossypium hirsutum HOM05D003972 ORTHO05D004609 1.4e-36 157.9 144 62.5
MD07G1010400 Malus domestica HOM05D003972 ORTHO05D004609 1.8e-36 157.5 144 62.5
Sed0017110 Sechium edule HOM05D003972 ORTHO05D004609 1.8e-36 157.5 142 59.2
GSVIVG01032087001 Vitis vinifera HOM05D003972 ORTHO05D004609 2.3e-36 157.1 143 60.1
FAN01G2341 Fragaria x ananassa HOM05D003972 ORTHO05D004609 3.0e-36 156.8 144 61.8
FvH4_7g01010 Fragaria vesca HOM05D003972 ORTHO05D004609 3.9e-36 156.4 142 62.7
FAN06G4274 Fragaria x ananassa HOM05D003972 ORTHO05D004609 5.2e-36 156.0 142 62.7
FAN10G2592 Fragaria x ananassa HOM05D003972 ORTHO05D004609 5.2e-36 156.0 142 62.7
Sed0014658 Sechium edule HOM05D003972 ORTHO05D004609 6.7e-36 155.6 140 62.1
Oeu047573.1 Olea europaea HOM05D003972 ORTHO05D004609 2.0e-35 154.1 143 58.7
SalBow6G4991 Salvia bowleyana HOM05D003972 ORTHO05D004609 2.6e-35 153.7 141 59.6
Haze_03211 Corylus avellana HOM05D000015 ORTHO05D004609 3.3e-35 153.3 336 36.6
FAN03G0639 Fragaria x ananassa HOM05D003972 ORTHO05D004609 3.3e-35 153.3 144 61.1
Nn2g15387 Nelumbo nucifera HOM05D003972 ORTHO05D004609 3.3e-35 153.3 143 60.1
Potri.009G061600 Populus trichocarpa HOM05D003972 ORTHO05D004609 3.3e-35 153.3 139 56.8
Rhsim07G0055300 Rhododendron simsii HOM05D003972 ORTHO05D004609 4.4e-35 152.9 142 60.6
TAR633G1993 Trochodendron aralioides HOM05D003972 ORTHO05D004609 4.4e-35 152.9 143 58.0
MSTRG.28071 Avicennia marina HOM05D003972 ORTHO05D004609 1.3e-34 151.4 142 57.7
Oeu014581.1 Olea europaea HOM05D003972 ORTHO05D004609 1.7e-34 151.0 151 55.6
Rhsim01G0129500 Rhododendron simsii HOM05D003972 ORTHO05D004609 1.7e-34 151.0 140 55.7
CANSAT80G0274 Cannabis sativa HOM05D003972 ORTHO05D004609 2.8e-34 150.2 142 56.3
ECA248G3800 Erigeron canadensis HOM05D003972 ORTHO05D004609 8.2e-34 148.7 142 53.5
HanXRQChr16g0524521 Helianthus annuus HOM05D003972 ORTHO05D004609 8.2e-34 148.7 140 56.4
Sabra09G0045500 Salix brachista HOM05D003972 ORTHO05D004609 8.2e-34 148.7 139 55.4
CiPaw.13G004600 Carya illinoinensis HOM05D003972 ORTHO05D004609 1.1e-33 148.3 164 53.7
Lj7A570T56 Lonicera japonica HOM05D003972 ORTHO05D004609 1.1e-33 148.3 154 55.2
SGA_v2.0_scaffold5G02971 Striga asiatica HOM05D003972 ORTHO05D004609 1.1e-33 148.3 142 57.0
TAR633G2347 Trochodendron aralioides HOM05D003972 ORTHO05D004609 1.8e-33 147.5 143 55.9
SalBow8G4898 Salvia bowleyana HOM05D003972 ORTHO05D004609 2.4e-33 147.1 137 58.4
SalBow5G3531 Salvia bowleyana HOM05D003972 ORTHO05D004609 3.1e-33 146.7 144 56.9
HanXRQChr17g0562951 Helianthus annuus HOM05D003972 ORTHO05D004609 4.1e-33 146.4 142 53.5
EL10Ac3g05626 Beta vulgaris HOM05D003972 ORTHO05D004609 7.0e-33 145.6 142 57.0
Sopen01g034180 Solanum pennellii HOM05D003972 ORTHO05D004609 7.0e-33 145.6 142 58.5
Nitab4.5_0002179g0040 Nicotiana tabacum HOM05D003972 ORTHO05D004609 9.1e-33 145.2 143 55.9
Hund16627 Selenicereus undatus HOM05D003972 ORTHO05D004609 9.1e-33 145.2 142 60.6
Nn7g36192 Nelumbo nucifera HOM05D003972 ORTHO05D004609 1.6e-32 144.4 142 57.0
PGSC0003DMG400006869 Solanum tuberosum HOM05D003972 ORTHO05D004609 1.6e-32 144.4 142 58.5
vmacro13664 Vaccinium macrocarpon HOM05D003972 ORTHO05D004609 1.6e-32 144.4 142 56.3
Nitab4.5_0000634g0150 Nicotiana tabacum HOM05D003972 ORTHO05D004609 2.6e-32 143.7 143 56.6
Solyc01g087120.3 Solanum lycopersicum HOM05D003972 ORTHO05D004609 3.5e-32 143.3 142 57.7
Hund14179 Selenicereus undatus HOM05D003972 ORTHO05D004609 1.0e-31 141.7 142 53.5
AUR62027419 Chenopodium quinoa HOM05D003972 ORTHO05D004609 1.7e-31 141.0 152 50.7
VMungo1080G1024 Vigna mungo HOM05D003972 ORTHO05D004609 3.8e-31 139.8 142 52.8
Atru.chr11.2659 Acer truncatum HOM05D003972 ORTHO05D004609 1.1e-30 138.3 142 52.8
CAN.G1560.6 Capsicum annuum HOM05D003972 ORTHO05D004609 3.2e-30 136.7 140 57.1
Ca_14380_v3 Cicer arietinum L. HOM05D003972 ORTHO05D004609 5.5e-30 136.0 142 50.0
ClCG10G012410 Citrullus lanatus HOM05D003972 ORTHO05D004609 5.5e-30 136.0 325 35.4
Cc02_g27920 Coffea canephora HOM05D003972 ORTHO05D004609 5.5e-30 136.0 139 55.4
Oeu006575.2 Olea europaea HOM05D003972 ORTHO05D004609 9.4e-30 135.2 145 54.5
PSO384G2850 Papaver somniferum HOM05D003972 ORTHO05D004609 9.4e-30 135.2 143 54.5
PSO339G6021 Papaver somniferum HOM05D003972 ORTHO05D004609 1.2e-29 134.8 143 54.5
QL04p007936 Quercus lobata HOM05D003972 ORTHO05D004609 1.2e-29 134.8 283 35.3
Glyma.15G273900 Glycine max HOM05D003972 ORTHO05D004609 1.6e-29 134.4 142 51.4
Peaxi162Scf00428g00211 Petunia axillaris HOM05D003972 ORTHO05D004609 2.1e-29 134.0 142 56.3
Glyma.08G155200 Glycine max HOM05D003972 ORTHO05D004609 2.7e-29 133.7 142 51.4
Ah.06g182390 Amaranthus hybridus HOM05D003972 ORTHO05D004609 4.7e-29 132.9 142 54.2
Ciclev10032620m.g Citrus clementina HOM05D003972 ORTHO05D004609 4.7e-29 132.9 142 50.7
Aqoxy2G00123 Aquilegia oxysepala HOM05D003972 ORTHO05D004609 6.1e-29 132.5 145 52.4
MBI04_g36067_MAGBIO Magnolia biondii HOM05D003972 ORTHO05D004609 8.0e-29 132.1 145 52.4
MBI01_g18885_MAGBIO Magnolia biondii HOM05D003972 ORTHO05D004609 1.0e-28 131.7 143 53.1
Sed0003633 Sechium edule HOM05D003972 ORTHO05D004609 1.4e-28 131.3 142 52.1
Phvul.005G021000 Phaseolus vulgaris HOM05D003972 ORTHO05D004609 4.0e-28 129.8 142 50.0
arahy.Tifrunner.gnm1.ann1.9I3PL7 Arachis hypogaea HOM05D003972 ORTHO05D004609 5.2e-28 129.4 142 51.4
arahy.Tifrunner.gnm1.ann1.XF35YI Arachis hypogaea HOM05D003972 ORTHO05D004609 5.2e-28 129.4 142 51.4
unitig_8.g3624 Utricularia gibba HOM05D003972 ORTHO05D004609 8.8e-28 128.6 143 51.7
AUR62009382 Chenopodium quinoa HOM05D003972 ORTHO05D004609 1.5e-27 127.9 152 48.7
ECA234G1269 Erigeron canadensis HOM05D005395 ORTHO05D000002 1.5e-27 127.9 135 50.4
Haze_18530 Corylus avellana HOM05D003972 ORTHO05D004609 7.5e-27 125.6 117 58.1
Lj9A631T54 Lonicera japonica HOM05D003972 ORTHO05D004609 7.5e-27 125.6 268 34.3
Cpa.g.sc245.17 Carica papaya HOM05D003972 ORTHO05D004609 9.7e-27 125.2 140 51.4
Psat5g207400 Pisum sativum HOM05D003972 ORTHO05D004609 9.7e-27 125.2 142 46.5
RcHm_v2.0_Chr7g0187561 Rosa chinensis HOM05D003972 ORTHO05D004609 1.3e-26 124.8 148 48.6
HPP92_003787 Vanilla planifolia HOM05D003972 ORTHO05D004609 1.3e-26 124.8 149 49.0
Lalb_Chr08g0232821 Lupinus albus HOM05D003972 ORTHO05D004609 1.7e-26 124.4 144 52.8
Lalb_Chr11g0073961 Lupinus albus HOM05D003972 ORTHO05D004609 1.7e-26 124.4 142 50.7
Medtr3g028730 Medicago truncatula HOM05D003972 ORTHO05D004609 2.8e-26 123.6 143 46.9
THA.LOC104809854 Tarenaya hassleriana HOM05D003972 ORTHO05D004609 2.8e-26 123.6 143 51.0
QL04p006659 Quercus lobata HOM05D003972 ORTHO05D004609 4.8e-26 122.9 97 62.9
AUR62027358 Chenopodium quinoa HOM05D003972 ORTHO05D004609 1.1e-25 121.7 150 46.7
TPR.G12160 Trifolium pratense HOM05D003972 ORTHO05D004609 1.8e-25 120.9 142 44.4
Haze_20480 Corylus avellana HOM05D003972 ORTHO05D004609 2.4e-25 120.6 85 69.4
ATR0605G205 Amborella trichopoda HOM05D003972 ORTHO05D004609 4.1e-25 119.8 149 49.7
CDE05G0778 Ceratophyllum demersum HOM05D003972 ORTHO05D004609 4.1e-25 119.8 144 46.5
THA.LOC104819071 Tarenaya hassleriana HOM05D003972 ORTHO05D004609 5.3e-25 119.4 141 51.8
A03p05990 Brassica napus HOM05D003972 ORTHO05D004609 7.0e-25 119.0 143 49.0
CDE05G2400 Ceratophyllum demersum HOM05D003972 ORTHO05D004609 9.1e-25 118.6 142 46.5
FAN13G3241 Fragaria x ananassa HOM05D003972 ORTHO05D004609 1.2e-24 118.2 152 50.0
BolC9t59206H Brassica oleracea HOM05D003972 ORTHO05D004609 2.0e-24 117.5 143 49.0
SGA_v2.0_scaffold24G10676 Striga asiatica HOM05D003972 ORTHO05D004609 2.0e-24 117.5 238 37.4
C09p63620 Brassica napus HOM05D003972 ORTHO05D004609 2.7e-24 117.1 143 48.3
BraA10t44544Z Brassica rapa HOM05D003972 ORTHO05D004609 2.7e-24 117.1 143 49.0
Os06g0646500 Oryza sativa ssp. japonica HOM05D003972 ORTHO05D004609 2.7e-24 117.1 101 60.4
Sc11g0009210 Simmondsia chinensis HOM05D003972 ORTHO05D004609 2.7e-24 117.1 82 67.1
Ah.06g182400 Amaranthus hybridus HOM05D003972 ORTHO05D004609 3.5e-24 116.7 170 45.9
FAN18G0724 Fragaria x ananassa HOM05D003972 ORTHO05D004609 3.5e-24 116.7 145 49.7
BcaC04g19115 Brassica carinata HOM05D003972 ORTHO05D004609 4.5e-24 116.3 143 48.3
BraA03t09936Z Brassica rapa HOM05D003972 ORTHO05D004609 7.7e-24 115.5 143 47.6
A10p24800 Brassica napus HOM05D003972 ORTHO05D004609 1.0e-23 115.2 143 49.0
DCAR_006337 Daucus carota HOM05D003972 ORTHO05D004609 1.7e-23 114.4 140 48.6
FvH4_5g10590 Fragaria vesca HOM05D003972 ORTHO05D004609 1.7e-23 114.4 152 48.7
Lj4g0010030 Lotus japonicus HOM05D003972 ORTHO05D004609 3.8e-23 113.2 142 47.2
Thhalv10014516m.g Eutrema salsugineum HOM05D003972 ORTHO05D004609 6.5e-23 112.5 143 45.5
CARHR199980 Cardamine hirsuta HOM05D003972 ORTHO05D004609 8.5e-23 112.1 143 44.1
BcaB01g05358 Brassica carinata HOM05D003972 ORTHO05D004609 1.5e-22 111.3 142 46.5
FAN04G1554 Fragaria x ananassa HOM05D003972 ORTHO05D004609 1.9e-22 110.9 153 46.4
Aa31LG3G15250 Aethionema arabicum HOM05D003972 ORTHO05D004609 3.2e-22 110.2 153 42.5
BcaNung01885 Brassica carinata HOM05D003972 ORTHO05D004609 3.2e-22 110.2 143 46.2
Sp6g30570 Schrenkiella parvula HOM05D003972 ORTHO05D004609 3.2e-22 110.2 143 45.5
Zm00001eb188600 Zea mays HOM05D003972 ORTHO05D004609 4.2e-22 109.8 144 47.2
C03p07030 Brassica napus HOM05D003972 ORTHO05D004609 5.5e-22 109.4 143 46.9
BolC3t13201H Brassica oleracea HOM05D003972 ORTHO05D004609 5.5e-22 109.4 143 46.9
Carub.0006s1161 Capsella rubella HOM05D003972 ORTHO05D004609 9.4e-22 108.6 143 43.4
Manes.07G005701 Manihot esculenta HOM05D003972 ORTHO05D004609 1.6e-21 107.8 102 59.8
SHI04087 Sapria himalayana HOM05D003972 ORTHO05D004609 6.1e-21 105.9 106 52.8
A02p01940 Brassica napus HOM05D003972 ORTHO05D004609 1.4e-20 104.8 143 44.1
BraA02t05167Z Brassica rapa HOM05D003972 ORTHO05D004609 1.4e-20 104.8 143 44.1
Aa31LG5G18610 Aethionema arabicum HOM05D003972 ORTHO05D004609 8.8e-20 102.1 156 42.3
AL6G24070 Arabidopsis lyrata HOM05D003972 ORTHO05D004609 8.8e-20 102.1 143 42.0
BcaNung01153 Brassica carinata HOM05D003972 ORTHO05D004609 1.5e-19 101.3 143 41.3
BolC2t06557H Brassica oleracea HOM05D003972 ORTHO05D004609 1.5e-19 101.3 143 41.3
CsaV3_3G032190 Cucumis sativus L. HOM05D003972 ORTHO05D004609 1.3e-18 98.2 82 59.8
AT5G13450 Arabidopsis thaliana HOM05D003972 ORTHO05D004609 1.7e-18 97.8 141 41.1
SEGI_23171 Sequoiadendron giganteum HOM05D003972 ORTHO05D004609 2.8e-18 97.1 100 51.0
Rhsim01G0052900 Rhododendron simsii HOM05D003972 ORTHO05D004609 1.4e-17 94.7 70 68.6
Rhsim02G0048300 Rhododendron simsii HOM05D003972 ORTHO05D004609 1.4e-17 94.7 70 67.1
Rhsim01G0081100 Rhododendron simsii HOM05D003972 ORTHO05D004609 3.1e-17 93.6 70 67.1
Rhsim02G0189700 Rhododendron simsii HOM05D003972 ORTHO05D004609 4.1e-17 93.2 78 60.3
SEGI_22482 Sequoiadendron giganteum HOM05D003972 ORTHO05D004609 1.6e-16 91.3 88 54.5
Dinv43448 Davidia involucrata HOM05D003972 ORTHO05D004609 7.7e-16 89.0 286 26.9
Pp3c21_15430 Physcomitrium patens HOM05D003972 ORTHO05D004609 2.3e-15 87.4 118 41.5
Mapoly0003s0068 Marchantia polymorpha HOM05D003972 ORTHO05D004609 5.0e-15 86.3 146 38.4
Pp3c21_13430 Physcomitrium patens HOM05D003972 ORTHO05D004609 1.9e-14 84.3 127 39.4
BcaB06g27143 Brassica carinata HOM05D003972 ORTHO05D004609 2.5e-14 84.0 74 54.1
MELO3C030665.2 Cucumis melo HOM05D003972 ORTHO05D004609 2.8e-13 80.5 55 69.1
SalBow5G0402 Salvia bowleyana HOM05D003972 ORTHO05D004609 5.2e-12 76.3 53 71.7
MCO05G116 Micromonas commoda HOM05D003972 ORTHO05D004609 1.1e-09 68.6 80 43.8
Actinidia21554 Actinidia chinensis HOM05D003972 ORTHO05D004609 2.4e-09 67.4 41 78.0
CBR_g17944 Chara braunii HOM05D003972 ORTHO05D004609 2.7e-08 63.9 82 40.2
CsaV3_3G032180 Cucumis sativus L. HOM05D003972 ORTHO05D004609 7.8e-08 62.4 41 80.5
MELO3C030924.2 Cucumis melo HOM05D003972 ORTHO05D004609 1.7e-07 61.2 40 72.5
Pp3c11_16260 Physcomitrium patens HOM05D003972 ORTHO05D004609 4.3e-06 56.6 137 29.2
AagrBONN_evm.TU.Sc2ySwM_344.1217 Anthoceros agrestis HOM05D003972 ORTHO05D004609 7.3e-06 55.8 66 43.9
arahy.Tifrunner.gnm1.ann1.4Z64RL Arachis hypogaea HOM05D003972 ORTHO05D082339 7.3e-06 55.8 62 48.4
SMO228G0064 Selaginella moellendorffii HOM05D003972 ORTHO05D004609 7.3e-06 55.8 81 34.6


User provided reference genes

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