Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Eucgr.I01985 Eucalyptus grandis HOM05D005960 ORTHO05D007537 7.1e-281 969.9 485 100.0
PGR004G2687 Punica granatum HOM05D005960 ORTHO05D007537 1.6e-227 792.7 459 87.6
Cfa007624 Carpinus fangiana HOM05D005960 ORTHO05D007537 1.5e-225 786.2 453 85.7
Atru.chr8.386 Acer truncatum HOM05D005960 ORTHO05D007537 5.5e-225 784.3 453 85.9
Actinidia01975 Actinidia chinensis HOM05D005960 ORTHO05D007537 5.2e-223 777.7 459 85.6
RcHm_v2.0_Chr2g0166541 Rosa chinensis HOM05D005960 ORTHO05D007537 4.4e-222 774.6 453 84.5
TAR371G0518 Trochodendron aralioides HOM05D005960 ORTHO05D007537 9.8e-222 773.5 453 84.8
Potri.017G090100 Populus trichocarpa HOM05D005960 ORTHO05D007537 1.1e-220 770.0 455 84.2
Manes.01G099100 Manihot esculenta HOM05D005960 ORTHO05D007537 3.1e-220 768.5 455 84.4
FvH4_6g47510 Fragaria vesca HOM05D005960 ORTHO05D007537 9.2e-220 766.9 453 84.1
GSVIVG01011490001 Vitis vinifera HOM05D005960 ORTHO05D007537 1.2e-219 766.5 453 84.1
MD17G1056600 Malus domestica HOM05D005960 ORTHO05D007537 4.5e-219 764.6 455 83.1
Thecc.04G090800 Theobroma cacao HOM05D005960 ORTHO05D007537 5.9e-219 764.2 457 83.6
Hma1.2p1_3044F.1_g332080 Hydrangea macrophylla HOM05D005960 ORTHO05D007537 7.8e-219 763.8 455 84.0
CSS0005506 Camellia sinensis var. sinensis HOM05D005960 ORTHO05D007537 1.3e-218 763.1 456 84.4
CSS0003743 Camellia sinensis var. sinensis HOM05D005960 ORTHO05D007537 1.7e-218 762.7 456 84.2
FAN05G2671 Fragaria x ananassa HOM05D005960 ORTHO05D007537 1.7e-218 762.7 462 82.0
CiPaw.04G058500 Carya illinoinensis HOM05D005960 ORTHO05D007537 2.9e-218 761.9 453 83.0
TWI60G0302 Tripterygium wilfordii HOM05D005960 ORTHO05D007537 1.5e-217 759.6 453 84.3
Duzib147G1008 Durio zibethinus HOM05D005960 ORTHO05D007537 4.3e-217 758.1 456 83.3
Rhsim10G0047200 Rhododendron simsii HOM05D005960 ORTHO05D007537 4.3e-217 758.1 472 81.4
vmacro05665 Vaccinium macrocarpon HOM05D005960 ORTHO05D007537 1.6e-216 756.1 456 83.1
Gohir.A11G071600 Gossypium hirsutum HOM05D005960 ORTHO05D007537 4.7e-216 754.6 458 83.6
COL.COLO4_21375 Corchorus olitorius HOM05D005960 ORTHO05D007537 6.1e-216 754.2 457 83.6
Rhsim10G0046600 Rhododendron simsii HOM05D005960 ORTHO05D007537 6.1e-216 754.2 472 80.7
Sabra17G0079200 Salix brachista HOM05D005960 ORTHO05D007537 6.1e-216 754.2 471 81.3
QL02p039477 Quercus lobata HOM05D005960 ORTHO05D007537 8.0e-216 753.8 461 83.7
Gorai.007G081300 Gossypium raimondii HOM05D005960 ORTHO05D007537 1.4e-215 753.1 458 83.4
Lj2g0023614 Lotus japonicus HOM05D005960 ORTHO05D007537 1.4e-215 753.1 453 82.8
Cpa.g.sc14.144 Carica papaya HOM05D005960 ORTHO05D007537 2.3e-215 752.3 456 82.9
QL02p039732 Quercus lobata HOM05D005960 ORTHO05D007537 2.3e-215 752.3 461 83.5
CANSAT64G2728 Cannabis sativa HOM05D005960 ORTHO05D007537 3.0e-215 751.9 453 82.8
Glyma.13G059000 Glycine max HOM05D005960 ORTHO05D007537 3.0e-215 751.9 456 80.9
Ciclev10011697m.g Citrus clementina HOM05D005960 ORTHO05D007537 5.2e-215 751.1 453 82.3
Phvul.004G033300 Phaseolus vulgaris HOM05D005960 ORTHO05D007537 6.8e-215 750.7 453 82.1
Ca_04868_v3 Cicer arietinum L. HOM05D005960 ORTHO05D007537 8.9e-215 750.4 453 81.9
Glyma.19G027400 Glycine max HOM05D005960 ORTHO05D007537 1.2e-214 750.0 453 81.2
THA.LOC104802965 Tarenaya hassleriana HOM05D005960 ORTHO05D007537 1.2e-214 750.0 452 83.2
Oeu000854.1 Olea europaea HOM05D005960 ORTHO05D007537 4.4e-214 748.0 472 80.9
MBI16_g15532_MAGBIO Magnolia biondii HOM05D005960 ORTHO05D007537 5.7e-214 747.7 456 81.4
Aqoxy3G00406 Aquilegia oxysepala HOM05D005960 ORTHO05D007537 7.5e-214 747.3 455 82.2
VMungo0464G0831 Vigna mungo HOM05D005960 ORTHO05D007537 9.8e-214 746.9 452 82.3
TPR.G26197 Trifolium pratense HOM05D005960 ORTHO05D007537 1.3e-213 746.5 453 82.1
HanXRQChr14g0448721 Helianthus annuus HOM05D005960 ORTHO05D007537 2.9e-213 745.3 454 83.0
Psat1g068640 Pisum sativum HOM05D005960 ORTHO05D007537 1.8e-212 742.7 453 81.5
EL10Ac2g03055 Beta vulgaris HOM05D005960 ORTHO05D007537 7.0e-212 740.7 457 81.0
Medtr6g013750 Medicago truncatula HOM05D005960 ORTHO05D007537 4.6e-211 738.0 453 81.0
AUR62042562 Chenopodium quinoa HOM05D005960 ORTHO05D007537 1.0e-210 736.9 458 81.2
Haze_14472 Corylus avellana HOM05D005960 ORTHO05D007537 1.0e-210 736.9 519 74.4
ClCG11G004630 Citrullus lanatus HOM05D005960 ORTHO05D007537 1.5e-209 733.0 455 81.1
Thhalv10020707m.g Eutrema salsugineum HOM05D005960 ORTHO05D007537 1.5e-209 733.0 456 80.9
MELO3C022021.2 Cucumis melo HOM05D005960 ORTHO05D007537 3.3e-209 731.9 455 81.3
CsaV3_5G038400 Cucumis sativus L. HOM05D005960 ORTHO05D007537 4.3e-209 731.5 455 81.5
Migut.H00653 Erythranthe guttata HOM05D005960 ORTHO05D007537 9.5e-209 730.3 457 81.6
Sp3g01070 Schrenkiella parvula HOM05D005960 ORTHO05D007537 2.1e-208 729.2 456 80.0
Sed0006667 Sechium edule HOM05D005960 ORTHO05D007537 2.8e-208 728.8 454 81.1
CAN.G734.6 Capsicum annuum HOM05D005960 ORTHO05D007537 3.6e-208 728.4 457 80.5
arahy.Tifrunner.gnm1.ann1.8N3EDT Arachis hypogaea HOM05D005960 ORTHO05D007537 4.0e-207 724.9 459 80.2
AT3G01060 Arabidopsis thaliana HOM05D005960 ORTHO05D007537 6.8e-207 724.2 456 79.4
Carub.0003s0111 Capsella rubella HOM05D005960 ORTHO05D007537 1.2e-206 723.4 457 79.4
Aa31LG5G12560 Aethionema arabicum HOM05D005960 ORTHO05D007537 7.5e-206 720.7 454 80.2
CARHR076010 Cardamine hirsuta HOM05D005960 ORTHO05D007537 7.5e-206 720.7 456 79.6
arahy.Tifrunner.gnm1.ann1.7U9LX7 Arachis hypogaea HOM05D005960 ORTHO05D007537 9.8e-206 720.3 459 79.7
AL3G11200 Arabidopsis lyrata HOM05D005960 ORTHO05D007537 2.2e-205 719.2 456 79.2
PSO013G0364 Papaver somniferum HOM05D005960 ORTHO05D007537 1.4e-204 716.5 455 79.3
PSO421G0059 Papaver somniferum HOM05D005960 ORTHO05D007537 1.4e-204 716.5 455 79.3
BNapus_Darmor_BZH_scaffold_113p00110 Brassica napus HOM05D005960 ORTHO05D007537 2.4e-204 715.7 455 79.8
Sopen03g016610 Solanum pennellii HOM05D005960 ORTHO05D007537 3.2e-204 715.3 445 81.3
ECA238G1943 Erigeron canadensis HOM05D005960 ORTHO05D007537 5.4e-204 714.5 456 79.6
BraA01t04634Z Brassica rapa HOM05D005960 ORTHO05D007537 9.2e-204 713.8 455 79.6
BNapus_Darmor_BZH_scaffold_97p00050 Brassica napus HOM05D005960 ORTHO05D007537 1.2e-203 713.4 457 79.4
Solyc03g013240.4 Solanum lycopersicum HOM05D005960 ORTHO05D007537 1.2e-203 713.4 445 80.9
BolC1t05923H Brassica oleracea HOM05D005960 ORTHO05D007537 2.0e-203 712.6 457 79.2
Lalb_Chr06g0175111 Lupinus albus HOM05D005960 ORTHO05D007537 4.3e-201 704.9 458 78.2
DCAR_005553 Daucus carota HOM05D005960 ORTHO05D007537 2.1e-200 702.6 447 80.3
Lj4C116G4 Lonicera japonica HOM05D005960 ORTHO05D007537 2.6e-198 695.7 462 78.8
Os05g0512200 Oryza sativa ssp. japonica HOM05D005960 ORTHO05D007537 1.3e-197 693.3 426 80.5
Lsat_1_v5_gn_2_87860 Lactuca sativa HOM05D005960 ORTHO05D007537 8.3e-197 690.6 458 77.1
Peaxi162Scf00451g00429 Petunia axillaris HOM05D005960 ORTHO05D007537 1.6e-195 686.4 455 78.2
ATR0111G015 Amborella trichopoda HOM05D005960 ORTHO05D007537 3.5e-195 685.3 452 76.1
FAN14G4646 Fragaria x ananassa HOM05D005960 ORTHO05D007537 3.9e-194 681.8 453 77.0
SalBow1G6551 Salvia bowleyana HOM05D005960 ORTHO05D007537 6.6e-194 681.0 467 76.7
Nn4g23343 Nelumbo nucifera HOM05D005960 ORTHO05D007537 4.3e-193 678.3 361 90.9
unitig_736.g22244 Utricularia gibba HOM05D005960 ORTHO05D007537 2.1e-192 676.0 461 75.1
Nitab4.5_0001637g0110 Nicotiana tabacum HOM05D005960 ORTHO05D007537 3.4e-190 668.7 459 75.8
Dinv33810 Davidia involucrata HOM05D005960 ORTHO05D007537 6.4e-189 664.5 457 77.0
FAN02G1813 Fragaria x ananassa HOM05D005960 ORTHO05D007537 2.4e-188 662.5 356 90.4
BcaC09g47681 Brassica carinata HOM05D005960 ORTHO05D007537 1.3e-186 656.8 457 74.6
Sc10g0003290 Simmondsia chinensis HOM05D005960 ORTHO05D007537 2.1e-184 649.4 367 85.8
SEGI_05647 Sequoiadendron giganteum HOM05D005960 ORTHO05D007537 1.3e-176 623.6 390 75.9
Prupe.3G258900 Prunus persica HOM05D005960 ORTHO05D007537 1.5e-174 616.7 331 90.0
Gohir.D11G075600 Gossypium hirsutum HOM05D005960 ORTHO05D007537 2.9e-173 612.5 331 90.3
Pp3c2_13280 Physcomitrium patens HOM05D005960 ORTHO05D007537 7.6e-166 587.8 444 65.3
Mapoly0015s0039 Marchantia polymorpha HOM05D005960 ORTHO05D007537 2.2e-165 586.3 421 68.6
Cc07_g03890 Coffea canephora HOM05D005960 ORTHO05D007537 1.3e-162 577.0 356 83.7
SMO335G0027 Selaginella moellendorffii HOM05D005960 ORTHO05D007537 6.7e-162 574.7 400 70.0
Nitab4.5_0005196g0010 Nicotiana tabacum HOM05D005960 ORTHO05D007537 7.4e-161 571.2 455 67.9
AUR62018147 Chenopodium quinoa HOM05D005960 ORTHO05D007537 2.4e-159 566.2 360 79.7
Actinidia01967 Actinidia chinensis HOM05D005960 ORTHO05D007537 4.0e-159 565.5 413 73.4
AagrBONN_evm.TU.Sc2ySwM_362.2259 Anthoceros agrestis HOM05D005960 ORTHO05D007537 8.7e-154 547.7 391 67.8
Zm00001eb292620 Zea mays HOM05D005960 ORTHO05D007537 2.2e-149 533.1 298 86.2
MSTRG.3021 Avicennia marina HOM05D005960 ORTHO05D007537 6.3e-144 515.0 278 90.3
HPP92_018459 Vanilla planifolia HOM05D005960 ORTHO05D007537 3.6e-139 499.2 311 78.8
Dinv11487 Davidia involucrata HOM05D005960 ORTHO05D007537 1.8e-138 496.9 315 81.0
CBR_g61504 Chara braunii HOM05D005960 ORTHO05D007537 2.2e-136 490.0 404 60.9
CDE04G1831 Ceratophyllum demersum HOM05D005960 ORTHO05D007537 1.4e-132 477.2 418 64.1
CDE07G2056 Ceratophyllum demersum HOM05D005960 ORTHO05D007537 3.9e-130 469.2 318 74.2
Hma1.2p1_1813F.1_g303790 Hydrangea macrophylla HOM05D005960 ORTHO05D007537 1.1e-127 461.1 235 92.3
Hma1.2p1_3044F.1_g332082 Hydrangea macrophylla HOM05D005960 ORTHO05D007537 1.1e-127 461.1 235 92.3
FAN09G3416 Fragaria x ananassa HOM05D005960 ORTHO05D007537 5.9e-126 455.3 412 60.2
TAR627G0454 Trochodendron aralioides HOM05D005960 ORTHO05D007537 5.9e-126 455.3 331 71.0
Cre13.g562750 Chlamydomonas reinhardtii HOM05D005960 ORTHO05D007537 2.0e-113 413.7 409 50.6
MD09G1061300 Malus domestica HOM05D005960 ORTHO05D007537 1.7e-93 347.4 242 75.2
MCO03G230 Micromonas commoda HOM05D005960 ORTHO05D007537 1.3e-77 294.7 319 46.7
MCO05G128 Micromonas commoda HOM05D005960 ORTHO05D007537 9.9e-65 251.9 360 41.7
PRCOL_00002980 Prasinoderma coloniale HOM05D005960 ORTHO05D007537 6.9e-58 229.2 402 37.1
PRCOL_00004151 Prasinoderma coloniale HOM05D005960 ORTHO05D007537 6.0e-54 216.1 400 37.5
CDE07G0145 Ceratophyllum demersum HOM05D005960 ORTHO05D007537 1.1e-50 205.3 117 86.3
PRCOL_00003347 Prasinoderma coloniale HOM05D005960 ORTHO05D007537 2.2e-48 197.6 379 34.0
Potri.004G125301 Populus trichocarpa HOM05D005960 ORTHO05D007537 8.4e-48 195.7 149 67.8
TPR.G22619 Trifolium pratense HOM05D005960 ORTHO05D007537 2.5e-47 194.1 149 66.4
Cc07_g03900 Coffea canephora HOM05D005960 ORTHO05D007537 3.2e-47 193.7 103 90.3
MCO08G069 Micromonas commoda HOM05D005960 ORTHO05D007537 3.2e-47 193.7 349 35.5
AUR62018149 Chenopodium quinoa HOM05D005960 ORTHO05D007537 1.8e-42 177.9 99 86.9
MCO08G121 Micromonas commoda HOM05D005960 ORTHO05D007537 3.1e-42 177.2 360 31.9
EL10Ac2g03064 Beta vulgaris HOM05D005960 ORTHO05D007537 9.3e-39 165.6 96 86.5
Oeu061493.1 Olea europaea HOM05D005960 ORTHO05D007537 1.5e-20 105.1 51 88.2
MD09G1061200 Malus domestica HOM05D005960 ORTHO05D007537 1.9e-15 88.2 90 53.3
PGSC0003DMG400033541 Solanum tuberosum HOM05D005960 ORTHO05D007537 5.5e-15 86.7 51 88.2
MCO08G023 Micromonas commoda HOM05D005960 ORTHO05D270145 5.0e-08 63.5 150 28.7
Zm00001eb030310 Zea mays HOM05D005960 ORTHO05D051632 1.1e-07 62.4 38 81.6
Zm00001eb250570 Zea mays HOM05D005960 ORTHO05D051632 1.9e-07 61.6 42 73.8


User provided reference genes

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