Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Eucgr.I01983 Eucalyptus grandis HOM05D006982 ORTHO05D008909 4.6e-97 357.8 175 100.0
GSVIVG01011493001 Vitis vinifera HOM05D006982 ORTHO05D008909 2.8e-70 268.9 163 75.5
Dinv11484 Davidia involucrata HOM05D006982 ORTHO05D008909 2.4e-69 265.8 167 74.9
CANSAT64G0008 Cannabis sativa HOM05D006982 ORTHO05D008909 5.3e-69 264.6 174 70.1
Haze_14468 Corylus avellana HOM05D006982 ORTHO05D008909 5.3e-69 264.6 173 72.8
A02p36510 Brassica napus HOM05D006982 ORTHO05D008909 9.1e-69 263.8 165 73.9
A06p40000 Brassica napus HOM05D006982 ORTHO05D008909 9.1e-69 263.8 161 74.5
BraA02t08647Z Brassica rapa HOM05D006982 ORTHO05D008909 9.1e-69 263.8 165 73.9
Duzib187G0332 Durio zibethinus HOM05D006982 ORTHO05D008909 1.5e-68 263.1 166 71.7
Potri.017G090400 Populus trichocarpa HOM05D006982 ORTHO05D008909 2.0e-68 262.7 183 69.4
Atru.chr8.390 Acer truncatum HOM05D006982 ORTHO05D008909 3.5e-68 261.9 153 78.4
C02p55480 Brassica napus HOM05D006982 ORTHO05D008909 4.5e-68 261.5 166 73.5
BolC2t11604H Brassica oleracea HOM05D006982 ORTHO05D008909 4.5e-68 261.5 166 73.5
BcaC03g17569 Brassica carinata HOM05D006982 ORTHO05D008909 5.9e-68 261.2 167 72.5
Thecc.04G091200 Theobroma cacao HOM05D006982 ORTHO05D008909 1.0e-67 260.4 175 70.3
Glyma.13G058700 Glycine max HOM05D006982 ORTHO05D008909 1.3e-67 260.0 166 75.3
Psat1g070160 Pisum sativum HOM05D006982 ORTHO05D008909 1.3e-67 260.0 155 76.1
BolC7t44339H Brassica oleracea HOM05D006982 ORTHO05D008909 2.2e-67 259.2 157 76.4
Hma1.2p1_3044F.1_g332060 Hydrangea macrophylla HOM05D006982 ORTHO05D008909 2.2e-67 259.2 162 74.1
Sp2g17880 Schrenkiella parvula HOM05D006982 ORTHO05D008909 2.2e-67 259.2 168 71.4
Sc11g0004740 Simmondsia chinensis HOM05D006982 ORTHO05D008909 2.2e-67 259.2 156 77.6
Thhalv10005014m.g Eutrema salsugineum HOM05D006982 ORTHO05D008909 3.8e-67 258.5 168 70.2
Manes.01G098700 Manihot esculenta HOM05D006982 ORTHO05D008909 3.8e-67 258.5 168 72.0
Hma1.2p1_1813F.1_g303760 Hydrangea macrophylla HOM05D006982 ORTHO05D008909 5.0e-67 258.1 162 73.5
BcaB07g30087 Brassica carinata HOM05D006982 ORTHO05D008909 6.5e-67 257.7 167 71.9
Phvul.004G033900 Phaseolus vulgaris HOM05D006982 ORTHO05D008909 1.1e-66 256.9 168 72.6
AT3G29280 Arabidopsis thaliana HOM05D006982 ORTHO05D008909 1.5e-66 256.5 168 71.4
Carub.0005s0799 Capsella rubella HOM05D006982 ORTHO05D008909 1.5e-66 256.5 172 69.2
Rhsim10G0045300 Rhododendron simsii HOM05D006982 ORTHO05D008909 1.5e-66 256.5 154 76.6
VMungo0464G0061 Vigna mungo HOM05D006982 ORTHO05D008909 1.9e-66 256.1 168 72.0
TPR.G26172 Trifolium pratense HOM05D006982 ORTHO05D008909 4.2e-66 255.0 163 72.4
CARHR292480 Cardamine hirsuta HOM05D006982 ORTHO05D008909 5.5e-66 254.6 155 74.2
CiPaw.03G091200 Carya illinoinensis HOM05D006982 ORTHO05D008909 5.5e-66 254.6 175 69.7
Aa31LG2G3980 Aethionema arabicum HOM05D006982 ORTHO05D008909 7.2e-66 254.2 156 73.7
Ciclev10012958m.g Citrus clementina HOM05D006982 ORTHO05D008909 7.2e-66 254.2 158 74.1
AL5G19280 Arabidopsis lyrata HOM05D006982 ORTHO05D008909 9.4e-66 253.8 165 70.9
PGR004G0184 Punica granatum HOM05D006982 ORTHO05D008909 1.2e-65 253.4 172 69.2
TWI60G0050 Tripterygium wilfordii HOM05D006982 ORTHO05D008909 2.1e-65 252.7 169 71.0
Lj2g0023544 Lotus japonicus HOM05D006982 ORTHO05D008909 3.6e-65 251.9 170 70.0
QL02p039506 Quercus lobata HOM05D006982 ORTHO05D008909 4.7e-65 251.5 176 68.8
Gorai.006G012000 Gossypium raimondii HOM05D006982 ORTHO05D008909 8.0e-65 250.8 168 69.0
Nitab4.5_0005196g0040 Nicotiana tabacum HOM05D006982 ORTHO05D008909 1.4e-64 250.0 165 68.5
Cc07_g04010 Coffea canephora HOM05D006982 ORTHO05D008909 1.8e-64 249.6 157 73.9
Gohir.D09G010400 Gossypium hirsutum HOM05D006982 ORTHO05D008909 1.8e-64 249.6 168 68.5
FvH4_6g47420 Fragaria vesca HOM05D006982 ORTHO05D008909 3.0e-64 248.8 166 69.9
FAN14G3321 Fragaria x ananassa HOM05D006982 ORTHO05D008909 3.0e-64 248.8 166 69.9
RcHm_v2.0_Chr2g0166501 Rosa chinensis HOM05D006982 ORTHO05D008909 3.0e-64 248.8 169 68.0
Nitab4.5_0001637g0060 Nicotiana tabacum HOM05D006982 ORTHO05D008909 3.9e-64 248.4 167 67.7
Glyma.19G027800 Glycine max HOM05D006982 ORTHO05D008909 5.2e-64 248.1 150 78.0
vmacro05662 Vaccinium macrocarpon HOM05D006982 ORTHO05D008909 6.7e-64 247.7 162 71.6
FAN09G4389 Fragaria x ananassa HOM05D006982 ORTHO05D008909 8.8e-64 247.3 166 69.9
Nn4g23351 Nelumbo nucifera HOM05D006982 ORTHO05D008909 1.1e-63 246.9 158 70.3
TAR629G3328 Trochodendron aralioides HOM05D006982 ORTHO05D008909 2.0e-63 246.1 159 71.1
CsaV3_3G026330 Cucumis sativus L. HOM05D006982 ORTHO05D008909 4.4e-63 245.0 151 74.2
MELO3C014935.2 Cucumis melo HOM05D006982 ORTHO05D008909 5.7e-63 244.6 151 74.2
THA.LOC104805498 Tarenaya hassleriana HOM05D006982 ORTHO05D008909 5.7e-63 244.6 158 71.5
ECA238G0675 Erigeron canadensis HOM05D006982 ORTHO05D008909 9.7e-63 243.8 170 66.5
FAN02G3418 Fragaria x ananassa HOM05D006982 ORTHO05D008909 1.3e-62 243.4 166 69.3
HanXRQChr07g0199461 Helianthus annuus HOM05D006982 ORTHO05D008909 1.3e-62 243.4 167 67.7
BraA06t26915Z Brassica rapa HOM05D006982 ORTHO05D008909 1.7e-62 243.0 142 77.5
Lalb_Chr02g0159031 Lupinus albus HOM05D006982 ORTHO05D008909 1.7e-62 243.0 160 71.2
MD09G1061600 Malus domestica HOM05D006982 ORTHO05D008909 2.8e-62 242.3 157 72.0
RcHm_v2.0_Chr2g0166491 Rosa chinensis HOM05D006982 ORTHO05D008909 2.8e-62 242.3 166 68.7
CAN.G734.5 Capsicum annuum HOM05D006982 ORTHO05D008909 3.7e-62 241.9 167 67.1
Sabra17G0079600 Salix brachista HOM05D006982 ORTHO05D008909 3.7e-62 241.9 224 56.2
ClCG05G014130 Citrullus lanatus HOM05D006982 ORTHO05D008909 4.8e-62 241.5 151 73.5
Sed0004734 Sechium edule HOM05D006982 ORTHO05D008909 1.1e-61 240.4 151 72.2
MSTRG.3019 Avicennia marina HOM05D006982 ORTHO05D008909 1.4e-61 240.0 161 70.2
Sopen03g016600 Solanum pennellii HOM05D006982 ORTHO05D008909 1.4e-61 240.0 162 66.0
Aqoxy3G00454 Aquilegia oxysepala HOM05D006982 ORTHO05D008909 1.8e-61 239.6 157 70.7
AUR62042567 Chenopodium quinoa HOM05D006982 ORTHO05D008909 2.4e-61 239.2 166 67.5
SGA_v2.0_scaffold4G02409 Striga asiatica HOM05D006982 ORTHO05D008909 3.1e-61 238.8 153 70.6
Lsat_1_v5_gn_2_87800 Lactuca sativa HOM05D006982 ORTHO05D008909 4.1e-61 238.4 171 67.8
EL10Ac2g03084 Beta vulgaris HOM05D006982 ORTHO05D008909 5.3e-61 238.0 161 70.2
Migut.H00650 Erythranthe guttata HOM05D006982 ORTHO05D008909 2.0e-60 236.1 161 69.6
Solyc03g013250.4 Solanum lycopersicum HOM05D006982 ORTHO05D008909 2.6e-60 235.7 162 64.8
SalBow1G5236 Salvia bowleyana HOM05D006982 ORTHO05D008909 1.0e-59 233.8 158 67.7
Actinidia07827 Actinidia chinensis HOM05D006982 ORTHO05D008909 2.9e-59 232.3 140 74.3
Os03g0257000 Oryza sativa ssp. japonica HOM05D006982 ORTHO05D008909 2.9e-59 232.3 166 63.9
ATR0064G116 Amborella trichopoda HOM05D006982 ORTHO05D008909 8.5e-59 230.7 156 71.2
Prupe.3G258600 Prunus persica HOM05D006982 ORTHO05D008909 1.9e-58 229.6 167 66.5
Zm00001eb011170 Zea mays HOM05D006982 ORTHO05D008909 1.9e-58 229.6 154 66.9
Cpa.g.sc14.148 Carica papaya HOM05D006982 ORTHO05D008909 2.5e-58 229.2 140 75.0
Os03g0209700 Oryza sativa ssp. japonica HOM05D006982 ORTHO05D008909 2.5e-58 229.2 159 66.0
PSO017G1487 Papaver somniferum HOM05D006982 ORTHO05D008909 8.0e-57 224.2 160 65.0
Gohir.A09G011401 Gossypium hirsutum HOM05D006982 ORTHO05D008909 5.7e-55 218.0 191 60.2
PSO478G0313 Papaver somniferum HOM05D006982 ORTHO05D008909 1.3e-54 216.9 160 62.5
Hund13166 Selenicereus undatus HOM05D006982 ORTHO05D008909 5.9e-52 208.0 161 65.2
Medtr6g013815 Medicago truncatula HOM05D006982 ORTHO05D008909 2.1e-49 199.5 121 73.6
SEGI_41437 Sequoiadendron giganteum HOM05D006982 ORTHO05D008909 1.4e-48 196.8 156 55.8
Peaxi162Scf00451g00425 Petunia axillaris HOM05D006982 ORTHO05D008909 2.0e-47 193.0 162 59.9
Lj4A116T80 Lonicera japonica HOM05D006982 ORTHO05D008909 5.7e-47 191.4 127 72.4
Ah.10g031970 Amaranthus hybridus HOM05D006982 ORTHO05D008909 1.3e-46 190.3 176 55.7
COL.COLO4_21380 Corchorus olitorius HOM05D006982 ORTHO05D008909 2.2e-46 189.5 126 67.5
SMO164G0193 Selaginella moellendorffii HOM05D006982 ORTHO05D008909 2.2e-46 189.5 148 56.8
CDE04G2259 Ceratophyllum demersum HOM05D006982 ORTHO05D008909 1.4e-45 186.8 125 68.8
BolC2t11598H Brassica oleracea HOM05D006982 ORTHO05D008909 2.4e-45 186.0 132 65.2
Pp3c21_18720 Physcomitrium patens HOM05D006982 ORTHO05D008909 2.0e-44 183.0 155 58.7
unitig_899.g15159 Utricularia gibba HOM05D006982 ORTHO05D008909 3.8e-43 178.7 152 59.2
arahy.Tifrunner.gnm1.ann1.NGZQ86 Arachis hypogaea HOM05D006982 ORTHO05D008909 9.8e-39 164.1 158 55.1
arahy.Tifrunner.gnm1.ann1.84WVAW Arachis hypogaea HOM05D006982 ORTHO05D008909 1.8e-37 159.8 158 54.4
C07p38170 Brassica napus HOM05D006982 ORTHO05D008909 5.0e-35 151.8 102 68.6
FAN05G3993 Fragaria x ananassa HOM05D006982 ORTHO05D008909 3.1e-32 142.5 99 71.7
SHI03750 Sapria himalayana HOM05D000002 ORTHO05D000001 3.7e-30 135.6 92 65.2
C02p55410 Brassica napus HOM05D006982 ORTHO05D008909 1.7e-27 126.7 114 55.3
CSS0035536 Camellia sinensis var. sinensis HOM05D006982 ORTHO05D008909 6.6e-27 124.8 78 69.2
TPR.G3955 Trifolium pratense HOM05D006982 ORTHO05D008909 2.9e-22 109.4 64 81.2
AUR62018155 Chenopodium quinoa HOM05D006982 ORTHO05D008909 1.3e-11 73.9 50 64.0
CSS0038093 Camellia sinensis var. sinensis HOM05D006982 ORTHO05D008909 8.6e-11 71.2 38 86.8
Lj4A116T81 Lonicera japonica HOM05D006982 ORTHO05D008909 4.7e-09 65.5 36 80.6
Medtr6g013805 Medicago truncatula HOM05D006982 ORTHO05D008909 4.7e-09 65.5 48 66.7
PGSC0003DMG400033554 Solanum tuberosum HOM05D006982 ORTHO05D008909 6.2e-09 65.1 43 69.8
SHI03749 Sapria himalayana HOM05D006982 ORTHO05D000001 1.2e-07 60.8 34 73.5
AUR62006323 Chenopodium quinoa HOM05D003441 ORTHO05D044017 2.0e-07 60.1 64 48.4


User provided reference genes

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