Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Eucgr.I01914 Eucalyptus grandis HOM05D008333 ORTHO05D010371 7.8e-106 387.1 191 100.0
Eucgr.L02760 Eucalyptus grandis HOM05D008333 ORTHO05D010371 5.8e-101 370.9 193 95.9
Eucgr.I01916 Eucalyptus grandis HOM05D008333 ORTHO05D010371 2.4e-83 312.4 193 81.3
Eucgr.L03696 Eucalyptus grandis HOM05D008333 ORTHO05D010371 6.3e-47 191.4 120 78.3
Potri.017G077100 Populus trichocarpa HOM05D008333 ORTHO05D010371 2.4e-22 109.8 145 37.9
Cfa007508 Carpinus fangiana HOM05D008333 ORTHO05D010371 2.5e-19 99.8 185 34.6
COL.COLO4_25183 Corchorus olitorius HOM05D008333 ORTHO05D010371 2.5e-19 99.8 117 45.3
Duzib147G0630 Durio zibethinus HOM05D008333 ORTHO05D010371 4.2e-19 99.0 120 41.7
Gorai.006G024100 Gossypium raimondii HOM05D008333 ORTHO05D010371 5.5e-19 98.6 153 37.9
Thecc.04G074300 Theobroma cacao HOM05D008333 ORTHO05D010371 9.4e-19 97.8 107 49.5
Cfa021167 Carpinus fangiana HOM05D008333 ORTHO05D010371 1.2e-18 97.4 108 43.5
Manes.17G020900 Manihot esculenta HOM05D008333 ORTHO05D010371 2.7e-18 96.3 122 41.0
Gohir.A09G021000 Gossypium hirsutum HOM05D008333 ORTHO05D010371 4.7e-18 95.5 126 41.3
QL02p080535 Quercus lobata HOM05D008333 ORTHO05D010371 4.7e-18 95.5 122 39.3
Haze_14585 Corylus avellana HOM05D008333 ORTHO05D010371 1.0e-17 94.4 108 41.7
Gohir.D09G020400 Gossypium hirsutum HOM05D008333 ORTHO05D010371 6.7e-17 91.7 124 38.7
TAR481G0013 Trochodendron aralioides HOM05D008333 ORTHO05D010371 1.2e-16 90.9 151 35.1
Gorai.006G023800 Gossypium raimondii HOM05D008333 ORTHO05D010371 2.0e-16 90.1 111 39.6
TAR481G0008 Trochodendron aralioides HOM05D008333 ORTHO05D010371 3.3e-16 89.4 157 33.8
CiPaw.03G030300 Carya illinoinensis HOM05D008333 ORTHO05D010371 1.3e-15 87.4 108 39.8
Prupe.3G272200 Prunus persica HOM05D008333 ORTHO05D010371 1.3e-15 87.4 116 35.3
CSS0029447 Camellia sinensis var. sinensis HOM05D008333 ORTHO05D010371 2.2e-15 86.7 141 36.9
CSS0048142 Camellia sinensis var. sinensis HOM05D008333 ORTHO05D010371 2.2e-15 86.7 141 36.9
Lj7P401T71 Lonicera japonica HOM05D008333 ORTHO05D010371 6.3e-15 85.1 118 36.4
VMungo0464G0738 Vigna mungo HOM05D008333 ORTHO05D010371 1.4e-14 84.0 111 39.6
Gohir.D09G020550 Gossypium hirsutum HOM05D008333 ORTHO05D010371 9.1e-14 81.3 86 44.2
Rhsim08G0066000 Rhododendron simsii HOM05D008333 ORTHO05D010371 2.0e-13 80.1 135 35.6
Glyma.18G255500 Glycine max HOM05D008333 ORTHO05D010371 1.3e-12 77.4 112 33.9
Nn4g23042 Nelumbo nucifera HOM05D008333 ORTHO05D010371 1.7e-12 77.0 135 33.3
Phvul.004G025900 Phaseolus vulgaris HOM05D008333 ORTHO05D010371 1.7e-12 77.0 111 37.8
Rhsim08G0065600 Rhododendron simsii HOM05D008333 ORTHO05D010371 2.9e-12 76.3 137 33.6
Rhsim08G0065900 Rhododendron simsii HOM05D008333 ORTHO05D010371 2.9e-12 76.3 135 34.1
Rhsim08G0065500 Rhododendron simsii HOM05D008333 ORTHO05D010371 3.8e-12 75.9 135 34.1
Rhsim08G0065800 Rhododendron simsii HOM05D008333 ORTHO05D010371 8.5e-12 74.7 118 37.3
FAN14G1695 Fragaria x ananassa HOM05D008333 ORTHO05D010371 1.1e-11 74.3 114 30.7
FAN14G3781 Fragaria x ananassa HOM05D000349 ORTHO05D001782 1.1e-11 74.3 114 30.7
Rhsim08G0065000 Rhododendron simsii HOM05D008333 ORTHO05D010371 1.1e-11 74.3 136 33.8
FvH4_6g49300 Fragaria vesca HOM05D008333 ORTHO05D010371 1.5e-11 73.9 114 30.7
Rhsim08G0065200 Rhododendron simsii HOM05D008333 ORTHO05D010371 1.9e-11 73.6 137 32.8
FvH4_6g49320 Fragaria vesca HOM05D008333 ORTHO05D010371 2.5e-11 73.2 144 27.8
FAN14G5614 Fragaria x ananassa HOM05D008333 ORTHO05D010371 2.5e-11 73.2 144 27.8
RcHm_v2.0_Chr2g0169181 Rosa chinensis HOM05D008333 ORTHO05D010371 2.5e-11 73.2 140 28.6
RcHm_v2.0_Chr2g0169171 Rosa chinensis HOM05D008333 ORTHO05D010371 3.2e-11 72.8 117 32.5
Rhsim08G0065100 Rhododendron simsii HOM05D008333 ORTHO05D010371 4.2e-11 72.4 113 38.1
Actinidia38746 Actinidia chinensis HOM05D008333 ORTHO05D010371 5.5e-11 72.0 126 37.3
Rhsim08G0065700 Rhododendron simsii HOM05D008333 ORTHO05D010371 5.5e-11 72.0 113 38.1
Rhsim08G0065400 Rhododendron simsii HOM05D008333 ORTHO05D010371 1.2e-10 70.9 118 36.4
Rhsim08G0065300 Rhododendron simsii HOM05D008333 ORTHO05D010371 3.6e-10 69.3 113 38.1
Nn3g17126 Nelumbo nucifera HOM05D008333 ORTHO05D010371 6.1e-10 68.6 92 37.0
TAR371G0090 Trochodendron aralioides HOM05D008333 ORTHO05D010371 1.0e-09 67.8 114 32.5
PGSC0003DMG400016257 Solanum tuberosum HOM05D008333 ORTHO05D010371 5.2e-09 65.5 109 30.3
CSS0005469 Camellia sinensis var. sinensis HOM05D008333 ORTHO05D010371 9.8e-08 61.2 139 28.1
Lsat_1_v5_gn_4_179800 Lactuca sativa HOM05D019919 ORTHO05D010371 1.1e-06 57.8 120 29.2
TPR.G7262 Trifolium pratense HOM05D008333 ORTHO05D010371 1.4e-06 57.4 104 30.8
Zm00001eb205270 Zea mays HOM05D009627 ORTHO05D010887 7.0e-06 55.1 80 36.2


User provided reference genes

Program Settings