Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Eucgr.I01896 Eucalyptus grandis HOM05D006434 ORTHO05D008069 3.2e-178 628.2 309 100.0
PGR142G2438 Punica granatum HOM05D006434 ORTHO05D008069 6.0e-132 474.6 307 76.9
Cfa007492 Carpinus fangiana HOM05D006434 ORTHO05D008069 1.5e-127 459.9 307 75.6
GSVIVG01032566001 Vitis vinifera HOM05D006434 ORTHO05D008069 2.3e-123 446.0 276 77.5
Dinv35002 Davidia involucrata HOM05D006434 ORTHO05D008069 3.0e-123 445.7 274 78.8
Nn1g08819 Nelumbo nucifera HOM05D006434 ORTHO05D008069 6.6e-123 444.5 297 74.7
Actinidia06053 Actinidia chinensis HOM05D006434 ORTHO05D008069 1.6e-121 439.9 304 72.4
TAR629G3263 Trochodendron aralioides HOM05D006434 ORTHO05D008069 1.1e-120 437.2 306 71.2
vmacro05779 Vaccinium macrocarpon HOM05D006434 ORTHO05D008069 1.4e-120 436.8 291 73.9
CSS0004781 Camellia sinensis var. sinensis HOM05D006434 ORTHO05D008069 2.4e-120 436.0 280 76.1
CSS0040499 Camellia sinensis var. sinensis HOM05D006434 ORTHO05D008069 4.0e-120 435.3 291 73.5
Potri.001G349800 Populus trichocarpa HOM05D006434 ORTHO05D008069 6.9e-120 434.5 311 70.1
Ciclev10012231m.g Citrus clementina HOM05D006434 ORTHO05D008069 1.7e-118 429.9 305 72.1
PGSC0003DMG400006900 Solanum tuberosum HOM05D006434 ORTHO05D008069 3.8e-118 428.7 275 74.9
Rhsim10G0029400 Rhododendron simsii HOM05D006434 ORTHO05D008069 6.4e-118 427.9 291 73.5
CAN.G1128.11 Capsicum annuum HOM05D006434 ORTHO05D008069 1.1e-117 427.2 275 74.9
COL.COLO4_36989 Corchorus olitorius HOM05D006434 ORTHO05D008069 1.1e-117 427.2 309 68.6
Manes.15G178000 Manihot esculenta HOM05D006434 ORTHO05D008069 1.9e-117 426.4 296 70.9
Sabra16G0229200 Salix brachista HOM05D006434 ORTHO05D008069 9.3e-117 424.1 310 68.4
Thecc.04G069300 Theobroma cacao HOM05D006434 ORTHO05D008069 9.3e-117 424.1 313 66.8
Solyc02g067540.3 Solanum lycopersicum HOM05D006434 ORTHO05D008069 4.6e-116 421.8 275 74.2
Sopen02g016670 Solanum pennellii HOM05D006434 ORTHO05D008069 4.6e-116 421.8 275 74.2
Atru.chr8.2465 Acer truncatum HOM05D006434 ORTHO05D008069 6.0e-116 421.4 277 72.9
Duzib264G0249 Durio zibethinus HOM05D006434 ORTHO05D008069 6.0e-116 421.4 311 67.8
Sed0011674 Sechium edule HOM05D006434 ORTHO05D008069 6.0e-116 421.4 299 69.6
Hma1.2p1_0136F.1_g062090 Hydrangea macrophylla HOM05D006434 ORTHO05D008069 7.9e-116 421.0 263 77.6
QL02p079411 Quercus lobata HOM05D006434 ORTHO05D008069 2.3e-115 419.5 274 76.3
Nitab4.5_0001727g0150 Nicotiana tabacum HOM05D006434 ORTHO05D008069 3.0e-115 419.1 275 73.5
CANSAT64G2331 Cannabis sativa HOM05D006434 ORTHO05D008069 8.7e-115 417.5 288 71.5
CsaV3_5G037720 Cucumis sativus L. HOM05D006434 ORTHO05D008069 1.9e-114 416.4 271 74.2
MELO3C021484.2 Cucumis melo HOM05D006434 ORTHO05D008069 3.3e-114 415.6 305 68.9
TWI56G0494 Tripterygium wilfordii HOM05D006434 ORTHO05D008069 3.3e-114 415.6 271 73.1
Gohir.D07G223600 Gossypium hirsutum HOM05D006434 ORTHO05D008069 1.3e-113 413.7 313 68.1
Gorai.001G257900 Gossypium raimondii HOM05D006434 ORTHO05D008069 1.6e-113 413.3 313 68.1
Gohir.A07G216800 Gossypium hirsutum HOM05D006434 ORTHO05D008069 6.2e-113 411.4 299 69.6
Cc07_g02850 Coffea canephora HOM05D006434 ORTHO05D008069 8.1e-113 411.0 280 73.2
Oeu022866.3 Olea europaea HOM05D006434 ORTHO05D008069 4.0e-112 408.7 344 62.2
MD09G1042700 Malus domestica HOM05D006434 ORTHO05D008069 5.3e-112 408.3 274 74.5
Lj2g0012157 Lotus japonicus HOM05D006434 ORTHO05D008069 1.2e-111 407.1 311 70.7
Peaxi162Scf00059g00128 Petunia axillaris HOM05D006434 ORTHO05D008069 9.9e-111 404.1 272 72.1
AUR62018326 Chenopodium quinoa HOM05D006434 ORTHO05D008069 1.7e-110 403.3 277 70.4
CiPaw.03G032300 Carya illinoinensis HOM05D006434 ORTHO05D008069 2.9e-110 402.5 280 71.4
PSO161G0076 Papaver somniferum HOM05D006434 ORTHO05D008069 4.9e-110 401.7 259 74.9
Aqoxy3G00846 Aquilegia oxysepala HOM05D006434 ORTHO05D008069 2.4e-109 399.4 278 69.8
Glyma.13G066900 Glycine max HOM05D006434 ORTHO05D008069 4.2e-109 398.7 315 67.9
Phvul.004G023900 Phaseolus vulgaris HOM05D006434 ORTHO05D008069 4.2e-109 398.7 295 71.5
Sc10g0004040 Simmondsia chinensis HOM05D006434 ORTHO05D008069 9.3e-109 397.5 255 74.1
Lsat_1_v5_gn_4_180280 Lactuca sativa HOM05D006434 ORTHO05D008069 2.7e-108 396.0 287 69.0
AL5G18090 Arabidopsis lyrata HOM05D006434 ORTHO05D008069 3.5e-108 395.6 305 65.6
PSO478G2838 Papaver somniferum HOM05D006434 ORTHO05D008069 3.5e-108 395.6 275 70.2
Carub.0005s0699 Capsella rubella HOM05D006434 ORTHO05D008069 6.0e-108 394.8 308 65.6
Migut.H00876 Erythranthe guttata HOM05D006434 ORTHO05D008069 7.9e-108 394.4 255 76.5
Medtr6g009400 Medicago truncatula HOM05D006434 ORTHO05D008069 7.9e-108 394.4 273 72.2
TPR.G32608 Trifolium pratense HOM05D006434 ORTHO05D008069 1.0e-107 394.0 314 66.9
RcHm_v2.0_Chr2g0169691 Rosa chinensis HOM05D006434 ORTHO05D008069 1.3e-107 393.7 273 71.4
CARHR292500 Cardamine hirsuta HOM05D006434 ORTHO05D008069 3.9e-107 392.1 309 65.7
ATR0665G567 Amborella trichopoda HOM05D006434 ORTHO05D008069 6.7e-107 391.3 274 70.1
ECA232G4812 Erigeron canadensis HOM05D006434 ORTHO05D008069 8.7e-107 391.0 264 72.7
Lalb_Chr21g0319131 Lupinus albus HOM05D006434 ORTHO05D008069 8.7e-107 391.0 313 67.7
FvH4_6g49670 Fragaria vesca HOM05D006434 ORTHO05D008069 1.9e-106 389.8 282 69.5
FAN14G5872 Fragaria x ananassa HOM05D006434 ORTHO05D008069 2.5e-106 389.4 282 69.5
HanXRQChr15g0488521 Helianthus annuus HOM05D006434 ORTHO05D008069 2.5e-106 389.4 256 73.4
FAN02G4063 Fragaria x ananassa HOM05D006434 ORTHO05D008069 3.3e-106 389.0 282 69.5
Thhalv10004634m.g Eutrema salsugineum HOM05D006434 ORTHO05D008069 2.8e-105 386.0 310 64.5
FAN05G1688 Fragaria x ananassa HOM05D006434 ORTHO05D008069 2.8e-105 386.0 282 68.8
MSTRG.23964 Avicennia marina HOM05D006434 ORTHO05D008069 4.8e-105 385.2 288 67.7
VMungo0464G0451 Vigna mungo HOM05D006434 ORTHO05D008069 6.2e-105 384.8 295 69.2
Sp2g17230 Schrenkiella parvula HOM05D006434 ORTHO05D008069 2.4e-104 382.9 299 65.9
arahy.Tifrunner.gnm1.ann1.X2C98S Arachis hypogaea HOM05D006434 ORTHO05D008069 4.0e-104 382.1 305 66.6
AUR62030560 Chenopodium quinoa HOM05D006434 ORTHO05D008069 1.5e-103 380.2 286 65.7
Aa31LG2G4610 Aethionema arabicum HOM05D006434 ORTHO05D008069 2.0e-103 379.8 286 67.8
C07p37520 Brassica napus HOM05D006434 ORTHO05D008069 2.0e-103 379.8 291 67.4
BcaC06g33735 Brassica carinata HOM05D006434 ORTHO05D008069 2.6e-103 379.4 286 67.1
A06p40510 Brassica napus HOM05D006434 ORTHO05D008069 7.6e-103 377.9 314 64.3
BolC7t44265H Brassica oleracea HOM05D006434 ORTHO05D008069 7.6e-103 377.9 265 71.7
BraA06t26970Z Brassica rapa HOM05D006434 ORTHO05D008069 7.6e-103 377.9 314 64.3
arahy.Tifrunner.gnm1.ann1.ICRE53 Arachis hypogaea HOM05D006434 ORTHO05D008069 1.3e-102 377.1 306 65.7
SGA_v2.0_scaffold205G41750 Striga asiatica HOM05D006434 ORTHO05D008069 1.7e-102 376.7 260 69.6
EL10Ac2g02902 Beta vulgaris HOM05D006434 ORTHO05D008069 3.8e-102 375.6 306 63.1
CDE02G1577 Ceratophyllum demersum HOM05D006434 ORTHO05D008069 1.9e-101 373.2 261 70.5
THA.LOC104823923 Tarenaya hassleriana HOM05D006434 ORTHO05D008069 9.3e-101 370.9 252 71.4
ClCG09G018520 Citrullus lanatus HOM05D006434 ORTHO05D008069 1.2e-100 370.5 247 73.3
Psat1g076480 Pisum sativum HOM05D006434 ORTHO05D008069 7.9e-100 367.9 274 69.0
DCAR_006717 Daucus carota HOM05D006434 ORTHO05D008069 5.1e-99 365.2 223 77.6
Haze_14607 Corylus avellana HOM05D006434 ORTHO05D008069 1.4e-96 357.1 283 67.1
unitig_744.g24344 Utricularia gibba HOM05D006434 ORTHO05D008069 2.0e-95 353.2 269 66.2
FAN09G0258 Fragaria x ananassa HOM05D006434 ORTHO05D008069 5.0e-94 348.6 280 63.9
Os03g0736400 Oryza sativa ssp. japonica HOM05D006434 ORTHO05D008069 3.2e-93 345.9 298 59.4
HPP92_023566 Vanilla planifolia HOM05D006434 ORTHO05D008069 1.6e-92 343.6 263 65.8
CSS0001127 Camellia sinensis var. sinensis HOM05D006434 ORTHO05D008069 2.3e-91 339.7 212 78.3
Glyma.19G017500 Glycine max HOM05D006434 ORTHO05D008069 1.5e-90 337.0 197 82.2
CSS0033350 Camellia sinensis var. sinensis HOM05D006434 ORTHO05D008069 3.7e-89 332.4 210 78.1
Prupe.3G275100 Prunus persica HOM05D006434 ORTHO05D008069 1.4e-88 330.5 231 71.0
AT3G28460 Arabidopsis thaliana HOM05D006434 ORTHO05D008069 8.5e-86 321.2 290 60.3
Nitab4.5_0003431g0070 Nicotiana tabacum HOM05D006434 ORTHO05D008069 8.8e-83 311.2 176 82.4
SalBow1G5247 Salvia bowleyana HOM05D006434 ORTHO05D008069 2.0e-79 300.1 311 52.7
Zm00001eb215320 Zea mays HOM05D006434 ORTHO05D008069 2.0e-79 300.1 298 54.0
Cpa.g.sc14.62 Carica papaya HOM05D006434 ORTHO05D008069 2.7e-76 289.7 176 79.5
Ca_04243_v3 Cicer arietinum L. HOM05D006434 ORTHO05D008069 6.1e-76 288.5 225 64.0
Lj7A404T37 Lonicera japonica HOM05D006434 ORTHO05D008069 1.7e-73 280.4 193 71.5
CSS0043817 Camellia sinensis var. sinensis HOM05D006434 ORTHO05D008069 6.5e-70 268.5 180 73.9
MBI01_g13068_MAGBIO Magnolia biondii HOM05D006434 ORTHO05D008069 1.0e-67 261.2 212 64.6
SMO171G0075 Selaginella moellendorffii HOM05D006434 ORTHO05D008069 1.5e-66 257.3 208 60.6
Pp3c7_630 Physcomitrium patens HOM05D006434 ORTHO05D008069 2.2e-65 253.4 207 59.9
AagrBONN_evm.TU.Sc2ySwM_344.3988 Anthoceros agrestis HOM05D006434 ORTHO05D008069 5.3e-64 248.8 196 61.7
Hund13291 Selenicereus undatus HOM05D006434 ORTHO05D008069 2.1e-60 236.9 191 63.4
Mapoly0140s0031 Marchantia polymorpha HOM05D006434 ORTHO05D008069 5.4e-56 222.2 210 52.9
CBR_g31858 Chara braunii HOM05D006434 ORTHO05D008069 9.4e-53 211.5 289 45.0
SEGI_25544 Sequoiadendron giganteum HOM05D006434 ORTHO05D008069 2.0e-47 193.7 162 59.3
PRCOL_00006620 Prasinoderma coloniale HOM05D006434 ORTHO05D008069 4.5e-47 192.6 212 48.1
Cre13.g566300 Chlamydomonas reinhardtii HOM05D006434 ORTHO05D008069 5.2e-43 179.1 236 41.5
SEGI_38692 Sequoiadendron giganteum HOM05D006434 ORTHO05D008069 2.0e-42 177.2 123 67.5
MBI01_g13070_MAGBIO Magnolia biondii HOM05D006434 ORTHO05D008069 4.1e-32 142.9 82 79.3
Solyc01g057060.1 Solanum lycopersicum HOM05D006434 ORTHO05D008069 1.3e-30 137.9 99 69.7
Sopen01g021310 Solanum pennellii HOM05D006434 ORTHO05D008069 5.6e-29 132.5 85 77.6
MCO03G139 Micromonas commoda HOM05D006434 ORTHO05D008069 2.1e-28 130.6 120 52.5
MD17G1044100 Malus domestica HOM05D006434 ORTHO05D008069 3.3e-21 106.7 60 86.7
TAR371G0222 Trochodendron aralioides HOM05D006434 ORTHO05D008069 8.1e-20 102.1 75 70.7
Cpa.g.sc14.61 Carica papaya HOM05D006434 ORTHO05D008069 1.1e-13 81.6 108 49.1
Lj7A404T38 Lonicera japonica HOM05D006434 ORTHO05D008069 7.6e-10 68.9 134 34.3
Lsat_1_v5_gn_7_34121 Lactuca sativa HOM05D006434 ORTHO05D008069 3.5e-07 60.1 37 75.7
Actinidia36050 Actinidia chinensis HOM05D006434 ORTHO05D053052 6.6e-06 55.8 29 82.8


User provided reference genes

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