Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Eucgr.I01860 Eucalyptus grandis HOM05D002965 ORTHO05D010536 1.2e-113 413.3 230 100.0
SabraMtG0009900 Salix brachista HOM05D002965 ORTHO05D010536 1.1e-34 151.0 188 48.4
Aqoxy3G01134 Aquilegia oxysepala HOM05D002965 ORTHO05D010536 2.1e-33 146.7 191 47.6
Lj6A7T8 Lonicera japonica HOM05D002965 ORTHO05D010536 6.2e-33 145.2 181 45.9
BolSC28t60357H Brassica oleracea HOM05D002965 ORTHO05D010536 7.6e-31 138.3 186 43.0
BraSC48t46254Z Brassica rapa HOM05D002965 ORTHO05D010536 7.6e-31 138.3 186 43.0
BNapus_Darmor_BZH_scaffold_234p00050 Brassica napus HOM05D002965 ORTHO05D010536 2.2e-30 136.7 113 57.5
PGSC0003DMG400010573 Solanum tuberosum HOM05D002965 ORTHO05D010536 4.9e-30 135.6 182 46.7
Sopen05g012840 Solanum pennellii HOM05D002965 ORTHO05D010183 1.4e-29 134.0 177 46.3
Ca_28560_v3 Cicer arietinum L. HOM05D002965 ORTHO05D010536 2.4e-29 133.3 170 45.9
Solyc00g500226.1 Solanum lycopersicum HOM05D002965 ORTHO05D010536 3.2e-29 132.9 205 42.4
Solyc00g500262.1 Solanum lycopersicum HOM05D002965 ORTHO05D010536 3.2e-29 132.9 205 42.4
Solyc06g074585.1 Solanum lycopersicum HOM05D002965 ORTHO05D010536 4.2e-29 132.5 216 41.2
Solyc00g500351.1 Solanum lycopersicum HOM05D002965 ORTHO05D011254 9.2e-29 131.3 232 40.1
Solyc00g500114.1 Solanum lycopersicum HOM05D002965 ORTHO05D010536 1.6e-28 130.6 113 61.1
Glyma.17G186200 Glycine max HOM05D002965 ORTHO05D010536 7.8e-28 128.3 112 56.2
PGR028G0005 Punica granatum HOM05D002965 ORTHO05D010536 3.9e-27 125.9 108 59.3
PGR069G0002 Punica granatum HOM05D002965 ORTHO05D010536 3.9e-27 125.9 108 59.3
PGR069G0012 Punica granatum HOM05D002965 ORTHO05D010536 3.9e-27 125.9 108 59.3
PGR069G0018 Punica granatum HOM05D002965 ORTHO05D010536 3.9e-27 125.9 108 59.3
PGR071G0002 Punica granatum HOM05D002965 ORTHO05D010536 3.9e-27 125.9 108 59.3
AL3G44420 Arabidopsis lyrata HOM05D002965 ORTHO05D010536 9.6e-26 121.3 115 51.3
AT2G07674 Arabidopsis thaliana HOM05D002965 ORTHO05D010536 9.6e-26 121.3 115 51.3
Aa31csc464G20 Aethionema arabicum HOM05D000743 ORTHO05D000580 9.0e-24 114.8 108 53.7
Psat0s4951g0200 Pisum sativum HOM05D002965 ORTHO05D010812 1.5e-23 114.0 88 64.8
HanXRQMTg0579151 Helianthus annuus HOM05D002965 ORTHO05D010536 1.3e-22 110.9 234 35.9
Thhalv10023135m.g Eutrema salsugineum HOM05D002965 ORTHO05D010536 2.2e-22 110.2 90 60.0
SalBow1G3342 Salvia bowleyana HOM05D002965 ORTHO05D010536 6.4e-22 108.6 97 55.7
ECA039G0005 Erigeron canadensis HOM05D002965 ORTHO05D010536 1.9e-21 107.1 109 48.6
ECA003G0005 Erigeron canadensis HOM05D002965 ORTHO05D000580 7.1e-21 105.1 173 37.6
Sopen11g024950 Solanum pennellii HOM05D000004 ORTHO05D000002 1.2e-20 104.4 101 54.5
Gorai.013G137600 Gossypium raimondii HOM05D002965 ORTHO05D010536 4.6e-20 102.4 150 44.7
ATMG01010 Arabidopsis thaliana HOM05D002965 ORTHO05D010536 1.0e-19 101.3 103 48.5
Hma1.2p1_0290F.1_g114710 Hydrangea macrophylla HOM05D002965 ORTHO05D010536 2.3e-19 100.1 189 36.5
Hma1.2p1_0290F.1_g114715 Hydrangea macrophylla HOM05D002965 ORTHO05D010536 2.3e-19 100.1 189 36.5
CARHR283260 Cardamine hirsuta HOM05D002965 ORTHO05D010536 3.0e-19 99.8 103 48.5
PGR028G0001 Punica granatum HOM05D002864 ORTHO05D007972 6.6e-19 98.6 109 48.6
arahy.Tifrunner.gnm1.ann1.8LYJ6L Arachis hypogaea HOM05D004291 ORTHO05D005620 8.7e-19 98.2 219 33.8
arahy.Tifrunner.gnm1.ann1.Y9PUBE Arachis hypogaea HOM05D004291 ORTHO05D005620 8.7e-19 98.2 219 33.8
HanXRQChr07g0188971 Helianthus annuus HOM05D002965 ORTHO05D010536 2.5e-18 96.7 109 47.7
Potri.007G062262 Populus trichocarpa HOM05D002965 ORTHO05D010536 2.5e-18 96.7 75 62.7
Gohir.D06G053851 Gossypium hirsutum HOM05D002965 ORTHO05D010536 7.3e-18 95.1 75 62.7
TPR.G28262 Trifolium pratense HOM05D002965 ORTHO05D010536 1.3e-17 94.4 166 35.5
arahy.Tifrunner.gnm1.ann1.QPLA3G Arachis hypogaea HOM05D005210 ORTHO05D010080 3.6e-17 92.8 65 67.7
Sopen11g012750 Solanum pennellii HOM05D002660 ORTHO05D003902 4.8e-17 92.4 75 60.0
arahy.Tifrunner.gnm1.ann1.N1QJ6Q Arachis hypogaea HOM05D007099 ORTHO05D009081 6.2e-17 92.0 83 59.0
arahy.Tifrunner.gnm1.ann1.LH5L6M Arachis hypogaea HOM05D002965 ORTHO05D010536 3.4e-15 86.3 78 56.4
Solyc11g045430.1 Solanum lycopersicum HOM05D002965 ORTHO05D010536 5.8e-15 85.5 75 57.3
arahy.Tifrunner.gnm1.ann1.5L8EUV Arachis hypogaea HOM05D007099 ORTHO05D009081 9.9e-15 84.7 68 61.8
CAN.G362.38 Capsicum annuum HOM05D002965 ORTHO05D010994 2.2e-14 83.6 72 55.6
EL10Ac5g12181 Beta vulgaris HOM05D002965 ORTHO05D010536 4.2e-13 79.3 78 50.0
HanXRQChr10g0297161 Helianthus annuus HOM05D002965 ORTHO05D010536 5.4e-13 79.0 72 51.4
Lalb_Chr00c24g0406881 Lupinus albus HOM05D002965 ORTHO05D010536 5.4e-13 79.0 72 55.6
VMungo0251G1451 Vigna mungo HOM05D002965 ORTHO05D010536 3.5e-12 76.3 64 60.9
Gorai.001G160200 Gossypium raimondii HOM05D003783 ORTHO05D004568 1.0e-11 74.7 46 73.9
HanXRQChr07g0188961 Helianthus annuus HOM05D002965 ORTHO05D010536 2.3e-11 73.6 63 58.7
HanXRQChr02g0035251 Helianthus annuus HOM05D002965 ORTHO05D010536 3.9e-11 72.8 56 60.7
HanXRQChr07g0189021 Helianthus annuus HOM05D002965 ORTHO05D010536 5.1e-11 72.4 64 56.2
Psat0s7112g0120 Pisum sativum HOM05D002965 ORTHO05D010536 5.1e-11 72.4 52 69.2
arahy.Tifrunner.gnm1.ann1.S21A07 Arachis hypogaea HOM05D008923 ORTHO05D011423 1.5e-10 70.9 61 57.4
BcaC05g26887 Brassica carinata HOM05D002965 ORTHO05D010536 1.5e-10 70.9 56 58.9
PGSC0003DMG400040498 Solanum tuberosum HOM05D002965 ORTHO05D010514 1.5e-10 70.9 127 39.4
arahy.Tifrunner.gnm1.ann1.BT1F12 Arachis hypogaea HOM05D007099 ORTHO05D009081 1.6e-09 67.4 78 48.7
Peaxi162Scf00348g00058 Petunia axillaris HOM05D002965 ORTHO05D010994 2.8e-09 66.6 56 57.1
BraSC77t46663Z Brassica rapa HOM05D002965 ORTHO05D010536 1.1e-08 64.7 60 53.3
Nitab4.5_0002493g0010 Nicotiana tabacum HOM05D002965 ORTHO05D010536 4.0e-08 62.8 39 76.9
Solyc00g025300.1 Solanum lycopersicum HOM05D002965 ORTHO05D010536 9.0e-08 61.6 47 61.7
arahy.Tifrunner.gnm1.ann1.HLYH4Q Arachis hypogaea HOM05D007099 ORTHO05D009081 2.6e-07 60.1 73 46.6
Solyc05g018800.1 Solanum lycopersicum HOM05D002965 ORTHO05D010536 2.6e-07 60.1 45 64.4
Aa31csc1081G40 Aethionema arabicum HOM05D002965 ORTHO05D010536 1.3e-06 57.8 56 48.2
arahy.Tifrunner.gnm1.ann1.86CJ1T Arachis hypogaea HOM05D004291 ORTHO05D005620 3.8e-06 56.2 220 29.1
HanXRQChr05g0134431 Helianthus annuus HOM05D002965 ORTHO05D010536 3.8e-06 56.2 56 48.2
HanXRQChr11g0327841 Helianthus annuus HOM05D002965 ORTHO05D010536 3.8e-06 56.2 56 48.2
Aqoxy12s029 Aquilegia oxysepala HOM05D001325 ORTHO05D005438 4.9e-06 55.8 93 41.9


User provided reference genes

Program Settings