Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Eucgr.I01814 Eucalyptus grandis HOM05D006484 ORTHO05D008002 4.6e-158 561.2 291 100.0
PGR142G1659 Punica granatum HOM05D006484 ORTHO05D008002 5.9e-105 384.8 299 70.6
arahy.Tifrunner.gnm1.ann1.ND36BV Arachis hypogaea HOM05D006484 ORTHO05D008002 2.3e-101 372.9 277 71.5
arahy.Tifrunner.gnm1.ann1.J6NIZK Arachis hypogaea HOM05D006484 ORTHO05D008002 3.0e-101 372.5 277 71.5
Thecc.04G008700 Theobroma cacao HOM05D006484 ORTHO05D008002 1.7e-99 366.7 271 71.6
Gohir.A11G067300 Gossypium hirsutum HOM05D006484 ORTHO05D008002 1.1e-98 364.0 236 78.0
Gohir.D11G071200 Gossypium hirsutum HOM05D006484 ORTHO05D008002 1.4e-98 363.6 274 70.4
Gorai.007G076500 Gossypium raimondii HOM05D006484 ORTHO05D008002 1.4e-98 363.6 274 70.4
Manes.17G122200 Manihot esculenta HOM05D006484 ORTHO05D008002 5.3e-98 361.7 290 66.6
Dinv33496 Davidia involucrata HOM05D006484 ORTHO05D008002 3.5e-97 359.0 268 69.0
Duzib147G0204 Durio zibethinus HOM05D006484 ORTHO05D008002 1.0e-96 357.5 274 67.9
GSVIVG01032484001 Vitis vinifera HOM05D006484 ORTHO05D008002 1.3e-96 357.1 231 76.2
COL.COLO4_28946 Corchorus olitorius HOM05D006484 ORTHO05D008002 5.0e-96 355.1 267 68.9
CiPaw.03G037700 Carya illinoinensis HOM05D006484 ORTHO05D008002 1.4e-95 353.6 299 62.9
TWI56G0797 Tripterygium wilfordii HOM05D006484 ORTHO05D008002 1.9e-95 353.2 290 65.2
CSS0043741 Camellia sinensis var. sinensis HOM05D006484 ORTHO05D008002 4.2e-95 352.1 287 66.6
Prupe.3G283800 Prunus persica HOM05D006484 ORTHO05D008002 5.5e-95 351.7 303 62.7
Ciclev10016148m.g Citrus clementina HOM05D006484 ORTHO05D008002 9.4e-95 350.9 272 65.1
Rhsim08G0055200 Rhododendron simsii HOM05D006484 ORTHO05D008002 9.4e-95 350.9 294 63.6
Hma1.2p1_0802F.1_g220370 Hydrangea macrophylla HOM05D006484 ORTHO05D008002 2.7e-94 349.4 268 67.9
ECA246G1918 Erigeron canadensis HOM05D006484 ORTHO05D008002 3.6e-94 349.0 235 72.8
SalBow7G4444 Salvia bowleyana HOM05D006484 ORTHO05D008002 3.6e-94 349.0 278 65.1
TAR629G1796 Trochodendron aralioides HOM05D006484 ORTHO05D008002 3.6e-94 349.0 276 66.3
Cc07_g02300 Coffea canephora HOM05D006484 ORTHO05D008002 6.1e-94 348.2 230 74.8
Potri.017G073000 Populus trichocarpa HOM05D006484 ORTHO05D008002 2.3e-93 346.3 266 66.5
HanXRQChr15g0474541 Helianthus annuus HOM05D006484 ORTHO05D008002 5.2e-93 345.1 290 64.8
Lj7A591T78 Lonicera japonica HOM05D006484 ORTHO05D008002 5.2e-93 345.1 235 71.9
QL02p076682 Quercus lobata HOM05D006484 ORTHO05D008002 6.7e-93 344.7 293 62.1
CANSAT64G2071 Cannabis sativa HOM05D006484 ORTHO05D008002 8.8e-93 344.4 289 63.7
MD17G1035000 Malus domestica HOM05D006484 ORTHO05D008002 8.8e-93 344.4 271 64.9
Nitab4.5_0003337g0080 Nicotiana tabacum HOM05D006484 ORTHO05D008002 1.1e-92 344.0 270 64.8
CsaV3_3G042410 Cucumis sativus L. HOM05D006484 ORTHO05D008002 1.5e-92 343.6 292 64.0
Nitab4.5_0005176g0030 Nicotiana tabacum HOM05D006484 ORTHO05D008002 3.3e-92 342.4 270 65.2
RcHm_v2.0_Chr2g0171411 Rosa chinensis HOM05D006484 ORTHO05D008002 3.3e-92 342.4 291 61.9
FvH4_6g50620 Fragaria vesca HOM05D006484 ORTHO05D008002 4.4e-92 342.0 293 61.8
FAN14G3872 Fragaria x ananassa HOM05D006484 ORTHO05D008002 4.4e-92 342.0 293 61.4
SGA_v2.0_scaffold30G12470 Striga asiatica HOM05D006484 ORTHO05D008002 7.4e-92 341.3 277 63.9
MSTRG.15510 Avicennia marina HOM05D006484 ORTHO05D008002 1.3e-91 340.5 278 64.0
FAN02G1518 Fragaria x ananassa HOM05D006484 ORTHO05D008002 1.3e-91 340.5 293 61.4
MBI16_g26453_MAGBIO Magnolia biondii HOM05D006484 ORTHO05D008002 1.3e-91 340.5 292 64.0
ClCG10G014230 Citrullus lanatus HOM05D006484 ORTHO05D008002 3.7e-91 339.0 275 64.4
Glyma.19G009200 Glycine max HOM05D006484 ORTHO05D008002 4.8e-91 338.6 235 71.1
Lalb_Chr21g0319431 Lupinus albus HOM05D006484 ORTHO05D008002 4.8e-91 338.6 235 71.5
Aqoxy3G01007 Aquilegia oxysepala HOM05D006484 ORTHO05D008002 8.2e-91 337.8 294 62.9
Haze_14667 Corylus avellana HOM05D006484 ORTHO05D008002 1.1e-90 337.4 299 60.5
Lsat_1_v5_gn_0_26201 Lactuca sativa HOM05D006484 ORTHO05D008002 1.1e-90 337.4 291 61.5
Peaxi162Scf00129g00106 Petunia axillaris HOM05D006484 ORTHO05D008002 1.1e-90 337.4 277 62.5
Migut.K01368 Erythranthe guttata HOM05D006484 ORTHO05D008002 1.4e-90 337.0 276 63.8
Glyma.13G169000 Glycine max HOM05D006484 ORTHO05D008002 2.4e-90 336.3 235 70.2
Sed0007993 Sechium edule HOM05D006484 ORTHO05D008002 3.1e-90 335.9 296 62.5
THA.LOC104805398 Tarenaya hassleriana HOM05D006484 ORTHO05D008002 3.1e-90 335.9 268 66.4
MELO3C009955.2 Cucumis melo HOM05D006484 ORTHO05D008002 4.1e-90 335.5 292 63.4
Sabra16G0230700 Salix brachista HOM05D006484 ORTHO05D008002 4.1e-90 335.5 270 64.4
Hund05806 Selenicereus undatus HOM05D006484 ORTHO05D008002 9.1e-90 334.3 233 72.5
Cfa007430 Carpinus fangiana HOM05D006484 ORTHO05D008002 1.2e-89 334.0 272 62.5
Lj2g0018435 Lotus japonicus HOM05D006484 ORTHO05D008002 2.6e-89 332.8 289 62.6
Phvul.004G016700 Phaseolus vulgaris HOM05D006484 ORTHO05D008002 3.5e-89 332.4 235 69.8
FAN09G0334 Fragaria x ananassa HOM05D006484 ORTHO05D008002 4.5e-89 332.0 301 59.5
VMungo0464G2075 Vigna mungo HOM05D006484 ORTHO05D008002 4.5e-89 332.0 235 69.8
TPR.G2295 Trifolium pratense HOM05D006484 ORTHO05D008002 7.7e-89 331.3 300 59.7
Ca_04198_v3 Cicer arietinum L. HOM05D006484 ORTHO05D008002 2.9e-88 329.3 235 68.9
unitig_88.g27777 Utricularia gibba HOM05D000190 ORTHO05D000113 1.1e-87 327.4 290 58.3
A04p04700 Brassica napus HOM05D006484 ORTHO05D008002 1.5e-87 327.0 266 63.2
BraA04t16182Z Brassica rapa HOM05D006484 ORTHO05D008002 1.5e-87 327.0 266 63.2
DCAR_021681 Daucus carota HOM05D006484 ORTHO05D008002 1.5e-87 327.0 321 57.3
Solyc02g086890.3 Solanum lycopersicum HOM05D006484 ORTHO05D008002 2.5e-87 326.2 289 60.9
FAN05G1767 Fragaria x ananassa HOM05D006484 ORTHO05D008002 3.2e-87 325.9 327 55.4
Sopen02g031660 Solanum pennellii HOM05D006484 ORTHO05D008002 5.5e-87 325.1 289 60.9
EL10Ac6g14629 Beta vulgaris HOM05D006484 ORTHO05D008002 2.1e-86 323.2 232 70.3
PGSC0003DMG401000526 Solanum tuberosum HOM05D006484 ORTHO05D008002 3.6e-86 322.4 229 68.6
PGSC0003DMG402000526 Solanum tuberosum HOM05D006484 ORTHO05D008002 3.6e-86 322.4 229 68.6
Ah.02g127510 Amaranthus hybridus HOM05D006484 ORTHO05D008002 4.7e-86 322.0 223 71.7
BcaC02g09737 Brassica carinata HOM05D006484 ORTHO05D008002 1.4e-85 320.5 266 62.0
C04p37040 Brassica napus HOM05D006484 ORTHO05D008002 1.4e-85 320.5 266 62.0
BolC4t25282H Brassica oleracea HOM05D006484 ORTHO05D008002 1.4e-85 320.5 266 62.0
Sp5g07210 Schrenkiella parvula HOM05D006484 ORTHO05D008002 3.0e-85 319.3 289 60.2
Medtr6g007180 Medicago truncatula HOM05D006484 ORTHO05D008002 6.7e-85 318.2 239 66.5
BcaB02g08436 Brassica carinata HOM05D006484 ORTHO05D008002 2.0e-84 316.6 267 61.4
Carub.0005s2191 Capsella rubella HOM05D006484 ORTHO05D008002 2.6e-84 316.2 236 68.2
AL5G36370 Arabidopsis lyrata HOM05D006484 ORTHO05D008002 5.7e-84 315.1 287 60.6
BolC8t50667H Brassica oleracea HOM05D006484 ORTHO05D008002 5.7e-84 315.1 243 65.0
C08p30440 Brassica napus HOM05D006484 ORTHO05D008002 7.5e-84 314.7 243 65.0
Sc10g0003790 Simmondsia chinensis HOM05D006484 ORTHO05D008002 7.5e-84 314.7 238 66.8
AT3G55250 Arabidopsis thaliana HOM05D006484 ORTHO05D008002 9.7e-84 314.3 254 63.8
BcaC07g39842 Brassica carinata HOM05D006484 ORTHO05D008002 9.7e-84 314.3 291 58.8
BraA09t40274Z Brassica rapa HOM05D006484 ORTHO05D008002 1.3e-83 313.9 289 59.9
Thhalv10010599m.g Eutrema salsugineum HOM05D006484 ORTHO05D008002 1.7e-83 313.5 236 65.3
CARHR165250 Cardamine hirsuta HOM05D006484 ORTHO05D008002 2.8e-83 312.8 254 63.8
Aa31LG10G9850 Aethionema arabicum HOM05D006484 ORTHO05D008002 4.8e-83 312.0 257 63.0
A09p48180 Brassica napus HOM05D006484 ORTHO05D008002 4.8e-83 312.0 289 59.5
Psat1g058640 Pisum sativum HOM05D006484 ORTHO05D008002 4.8e-83 312.0 230 67.0
CDE05G1394 Ceratophyllum demersum HOM05D001719 ORTHO05D008883 1.2e-81 307.4 230 65.2
PSO832G1464 Papaver somniferum HOM05D006484 ORTHO05D008002 1.6e-81 307.0 234 65.4
PSO063G6163 Papaver somniferum HOM05D006484 ORTHO05D008002 2.0e-81 306.6 234 65.0
ATR0730G086 Amborella trichopoda HOM05D006484 ORTHO05D008002 2.5e-79 299.7 230 64.8
Nn4g22800 Nelumbo nucifera HOM05D006484 ORTHO05D008002 4.1e-74 282.3 234 62.4
Os05g0526200 Oryza sativa ssp. japonica HOM05D006484 ORTHO05D008002 1.6e-73 280.4 253 59.3
BcaB01g00117 Brassica carinata HOM05D006484 ORTHO05D008002 2.1e-70 270.0 231 61.5
Actinidia35740 Actinidia chinensis HOM05D006484 ORTHO05D008002 2.3e-69 266.5 185 71.9
HPP92_024318 Vanilla planifolia HOM05D006484 ORTHO05D008002 3.7e-67 259.2 249 55.8
Cpa.g.sc39.92 Carica papaya HOM05D006484 ORTHO05D008002 1.1e-58 231.1 168 70.2
AUR62007841 Chenopodium quinoa HOM05D006484 ORTHO05D008002 1.0e-56 224.6 233 54.1
vmacro18241 Vaccinium macrocarpon HOM05D006484 ORTHO05D008002 1.7e-56 223.8 292 46.2
Zm00001eb215070 Zea mays HOM05D006484 ORTHO05D008002 1.8e-45 187.2 138 66.7
Mapoly0095s0016 Marchantia polymorpha HOM05D006484 ORTHO05D008002 2.3e-45 186.8 191 50.3
AagrBONN_evm.TU.Sc2ySwM_344.2636 Anthoceros agrestis HOM05D006484 ORTHO05D008002 4.0e-45 186.0 205 47.8
BolC3t16636H Brassica oleracea HOM05D006484 ORTHO05D008002 2.0e-44 183.7 128 67.2
AUR62003035 Chenopodium quinoa HOM05D006484 ORTHO05D008002 2.6e-44 183.3 203 52.7
Pp3c21_1380 Physcomitrium patens HOM05D006484 ORTHO05D008002 2.4e-42 176.8 190 48.4
BolC7t43763H Brassica oleracea HOM05D006484 ORTHO05D008002 3.5e-41 172.9 148 58.1
HPP92_024280 Vanilla planifolia HOM05D006484 ORTHO05D008002 8.6e-40 168.3 143 59.4
SMO165G0092 Selaginella moellendorffii HOM05D006484 ORTHO05D008002 3.3e-39 166.4 197 43.1
CBR_g163 Chara braunii HOM05D006484 ORTHO05D008002 1.4e-37 161.0 219 41.6
CAN.G473.120 Capsicum annuum HOM05D006484 ORTHO05D008002 1.9e-34 150.6 140 55.7
Atru.chr6.2293 Acer truncatum HOM05D006484 ORTHO05D008002 7.1e-34 148.7 87 79.3
CAN.G685.18 Capsicum annuum HOM05D006484 ORTHO05D008002 1.4e-29 134.4 91 74.7
MD09G1034600 Malus domestica HOM05D006484 ORTHO05D000001 2.1e-25 120.6 83 72.3
Atru.chr6.2294 Acer truncatum HOM05D006484 ORTHO05D008002 1.7e-24 117.5 87 67.8
arahy.Tifrunner.gnm1.ann1.QWBN9A Arachis hypogaea HOM05D006484 ORTHO05D008002 2.1e-17 94.0 60 73.3
BcaC06g34142 Brassica carinata HOM05D006484 ORTHO05D008002 4.6e-17 92.8 90 51.1
TPR.G33278 Trifolium pratense HOM05D006484 ORTHO05D008002 6.9e-13 79.0 51 70.6
Cre03.g183400 Chlamydomonas reinhardtii HOM05D006484 ORTHO05D008002 1.5e-12 77.8 186 28.0
MD09G1034700 Malus domestica HOM05D006484 ORTHO05D008002 1.1e-07 61.6 75 50.7
arahy.Tifrunner.gnm1.ann1.5V94PQ Arachis hypogaea HOM05D005791 ORTHO05D008002 7.4e-07 58.9 34 79.4
PRCOL_00006041 Prasinoderma coloniale HOM05D006484 ORTHO05D008002 1.6e-06 57.8 130 32.3


User provided reference genes

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