Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Eucgr.I01763 Eucalyptus grandis HOM05D008092 ORTHO05D010277 3.5e-97 358.2 174 100.0
Eucgr.I01759 Eucalyptus grandis HOM05D008092 ORTHO05D010277 1.7e-46 189.9 113 83.2
Manes.17G115000 Manihot esculenta HOM05D008092 ORTHO05D010277 9.1e-29 131.0 111 58.6
GSVIVG01032429001 Vitis vinifera HOM05D008092 ORTHO05D010277 3.8e-27 125.6 126 48.4
TAR374G1215 Trochodendron aralioides HOM05D008092 ORTHO05D010277 1.9e-26 123.2 112 54.5
COL.COLO4_29084 Corchorus olitorius HOM05D008092 ORTHO05D010277 3.3e-26 122.5 143 45.5
CSS0000484 Camellia sinensis var. sinensis HOM05D008092 ORTHO05D010277 5.5e-26 121.7 106 56.6
CSS0015151 Camellia sinensis var. sinensis HOM05D008092 ORTHO05D010277 5.5e-26 121.7 106 56.6
Dinv33463 Davidia involucrata HOM05D008092 ORTHO05D010277 9.5e-26 120.9 111 55.0
Gohir.A10G102700 Gossypium hirsutum HOM05D008092 ORTHO05D010277 1.6e-25 120.2 129 48.1
Thecc.04G015000 Theobroma cacao HOM05D008092 ORTHO05D010277 1.6e-25 120.2 127 46.5
TWI36G1451 Tripterygium wilfordii HOM05D008092 ORTHO05D010277 3.6e-25 119.0 122 49.2
Duzib187G1326 Durio zibethinus HOM05D008092 ORTHO05D010277 6.1e-25 118.2 131 48.9
Gohir.D10G086900 Gossypium hirsutum HOM05D008092 ORTHO05D010277 8.0e-25 117.9 129 46.5
Atru.chr6.2355 Acer truncatum HOM05D008092 ORTHO05D010277 1.0e-24 117.5 113 54.0
Gorai.011G095100 Gossypium raimondii HOM05D008092 ORTHO05D010277 1.0e-24 117.5 129 46.5
CiPaw.02G035400 Carya illinoinensis HOM05D008092 ORTHO05D010277 1.8e-24 116.7 117 51.3
CiPaw.03G041800 Carya illinoinensis HOM05D008092 ORTHO05D010277 1.8e-24 116.7 117 51.3
QL02p075225 Quercus lobata HOM05D008092 ORTHO05D010277 3.0e-24 115.9 117 52.1
QL93p1842_0091 Quercus lobata HOM05D008092 ORTHO05D010277 3.0e-24 115.9 117 52.1
Cfa007393 Carpinus fangiana HOM05D008092 ORTHO05D010277 1.2e-23 114.0 118 50.0
PGR083G2137 Punica granatum HOM05D008092 ORTHO05D010277 3.4e-23 112.5 118 49.2
VMungo0464G1885 Vigna mungo HOM05D008092 ORTHO05D010277 2.8e-22 109.4 96 54.2
CiPaw.04G027500 Carya illinoinensis HOM05D008092 ORTHO05D010277 4.9e-22 108.6 112 49.1
Prupe.3G289300 Prunus persica HOM05D008092 ORTHO05D010277 8.3e-22 107.8 116 47.4
MBI10_g33304_MAGBIO Magnolia biondii HOM05D008092 ORTHO05D010277 1.8e-21 106.7 111 46.8
Actinidia06006 Actinidia chinensis HOM05D008092 ORTHO05D010277 3.1e-21 105.9 113 50.4
CANSAT64G0606 Cannabis sativa HOM05D008092 ORTHO05D010277 2.7e-20 102.8 118 44.9
Lsat_1_v5_gn_4_183520 Lactuca sativa HOM05D008092 ORTHO05D010277 2.7e-20 102.8 117 45.3
Phvul.004G010900 Phaseolus vulgaris HOM05D008092 ORTHO05D010277 2.7e-20 102.8 112 50.0
CsaV3_3G042670 Cucumis sativus L. HOM05D008092 ORTHO05D010277 5.9e-20 101.7 111 44.1
vmacro05852 Vaccinium macrocarpon HOM05D008092 ORTHO05D010277 5.9e-20 101.7 111 46.8
MBI10_g44380_MAGBIO Magnolia biondii HOM05D008092 ORTHO05D010277 1.0e-19 100.9 104 46.2
HanXRQChr09g0255051 Helianthus annuus HOM05D008092 ORTHO05D010277 1.3e-19 100.5 113 45.1
MD17G1030500 Malus domestica HOM05D008092 ORTHO05D010277 2.3e-19 99.8 113 46.9
CDE02G4384 Ceratophyllum demersum HOM05D008092 ORTHO05D010277 2.9e-19 99.4 117 43.6
Nitab4.5_0000118g0190 Nicotiana tabacum HOM05D008092 ORTHO05D010277 6.6e-19 98.2 115 43.5
Lalb_Chr02g0156941 Lupinus albus HOM05D008092 ORTHO05D010277 1.1e-18 97.4 117 45.3
Psat1g056120 Pisum sativum HOM05D008092 ORTHO05D010277 3.3e-18 95.9 124 44.4
Glyma.19G005600 Glycine max HOM05D008092 ORTHO05D010277 5.6e-18 95.1 107 48.6
Cc00_g25440 Coffea canephora HOM05D008092 ORTHO05D010277 7.3e-18 94.7 116 41.4
Glyma.05G005000 Glycine max HOM05D008092 ORTHO05D010277 9.5e-18 94.4 107 50.5
Lj2g0022146 Lotus japonicus HOM05D008092 ORTHO05D010277 1.6e-17 93.6 116 44.0
HPP92_003083 Vanilla planifolia HOM05D008092 ORTHO05D010277 1.6e-17 93.6 112 43.8
Medtr6g005430 Medicago truncatula HOM05D008092 ORTHO05D010277 1.8e-16 90.1 130 42.3
Rhsim10G0018500 Rhododendron simsii HOM05D008092 ORTHO05D010277 2.3e-16 89.7 147 36.1
Cpa.g.sc108.51 Carica papaya HOM05D008092 ORTHO05D010277 1.5e-15 87.0 100 45.0
Sc03g0007590 Simmondsia chinensis HOM05D008092 ORTHO05D010277 2.0e-15 86.7 105 43.8
TPR.G14075 Trifolium pratense HOM05D008092 ORTHO05D010277 2.0e-15 86.7 117 42.7
arahy.Tifrunner.gnm1.ann1.KZ8L38 Arachis hypogaea HOM05D008092 ORTHO05D010277 7.5e-15 84.7 101 47.5
arahy.Tifrunner.gnm1.ann1.M07V8F Arachis hypogaea HOM05D008092 ORTHO05D010277 7.5e-15 84.7 101 47.5
ECA232G1487 Erigeron canadensis HOM05D008092 ORTHO05D010277 8.3e-14 81.3 119 37.8
DCAR_021714 Daucus carota HOM05D008092 ORTHO05D010277 1.1e-13 80.9 103 42.7
Oeu063467.1 Olea europaea HOM05D008092 ORTHO05D010277 3.5e-12 75.9 87 39.1
Haze_14721 Corylus avellana HOM05D008092 ORTHO05D010277 7.8e-12 74.7 59 61.0
Haze_14716 Corylus avellana HOM05D008092 ORTHO05D010277 2.3e-11 73.2 64 56.2
Mapoly0035s0098 Marchantia polymorpha HOM05D008092 ORTHO05D010277 2.3e-11 73.2 118 31.4
Pp3c2_13540 Physcomitrium patens HOM05D008092 ORTHO05D010277 3.6e-09 65.9 118 33.9
MELO3C009977.2 Cucumis melo HOM05D008092 ORTHO05D010277 1.4e-08 63.9 63 49.2
Nitab4.5_0002306g0010 Nicotiana tabacum HOM05D008092 ORTHO05D010277 6.8e-08 61.6 62 43.5
Nn3g16773 Nelumbo nucifera HOM05D008092 ORTHO05D010277 6.4e-06 55.1 66 42.4
SEGI_08853 Sequoiadendron giganteum HOM05D008092 ORTHO05D004758 8.3e-06 54.7 58 39.7


User provided reference genes

Program Settings