Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Eucgr.I01759 Eucalyptus grandis HOM05D008092 ORTHO05D010277 8.4e-69 263.5 124 100.0
Eucgr.I01763 Eucalyptus grandis HOM05D008092 ORTHO05D010277 5.3e-47 191.0 113 83.2
Manes.17G115000 Manihot esculenta HOM05D008092 ORTHO05D010277 5.1e-34 147.9 127 57.5
TAR374G1215 Trochodendron aralioides HOM05D008092 ORTHO05D010277 4.8e-32 141.4 121 56.2
Dinv33463 Davidia involucrata HOM05D008092 ORTHO05D010277 9.1e-31 137.1 121 56.2
Cfa007393 Carpinus fangiana HOM05D008092 ORTHO05D010277 1.2e-30 136.7 127 52.0
QL02p075225 Quercus lobata HOM05D008092 ORTHO05D010277 2.0e-30 136.0 119 55.5
QL93p1842_0091 Quercus lobata HOM05D008092 ORTHO05D010277 2.0e-30 136.0 119 55.5
GSVIVG01032429001 Vitis vinifera HOM05D008092 ORTHO05D010277 5.9e-30 134.4 115 53.9
CiPaw.02G035400 Carya illinoinensis HOM05D008092 ORTHO05D010277 7.7e-30 134.0 119 54.6
CiPaw.03G041800 Carya illinoinensis HOM05D008092 ORTHO05D010277 7.7e-30 134.0 119 54.6
Atru.chr6.2355 Acer truncatum HOM05D008092 ORTHO05D010277 2.2e-29 132.5 115 57.4
Gohir.A10G102700 Gossypium hirsutum HOM05D008092 ORTHO05D010277 3.8e-29 131.7 123 53.7
Thecc.04G015000 Theobroma cacao HOM05D008092 ORTHO05D010277 5.0e-29 131.3 123 52.0
TWI36G1451 Tripterygium wilfordii HOM05D008092 ORTHO05D010277 5.0e-29 131.3 120 54.2
CiPaw.04G027500 Carya illinoinensis HOM05D008092 ORTHO05D010277 1.5e-28 129.8 128 50.0
Gohir.D10G086900 Gossypium hirsutum HOM05D008092 ORTHO05D010277 1.5e-28 129.8 123 52.0
Gorai.011G095100 Gossypium raimondii HOM05D008092 ORTHO05D010277 1.9e-28 129.4 123 52.0
Duzib187G1326 Durio zibethinus HOM05D008092 ORTHO05D010277 7.2e-28 127.5 122 52.5
MBI10_g33304_MAGBIO Magnolia biondii HOM05D008092 ORTHO05D010277 9.4e-28 127.1 115 52.2
COL.COLO4_29084 Corchorus olitorius HOM05D008092 ORTHO05D010277 1.4e-26 123.2 123 49.6
CANSAT64G0606 Cannabis sativa HOM05D008092 ORTHO05D010277 5.2e-26 121.3 122 47.5
PGR083G2137 Punica granatum HOM05D008092 ORTHO05D010277 5.2e-26 121.3 113 51.3
CDE02G4384 Ceratophyllum demersum HOM05D008092 ORTHO05D010277 1.1e-25 120.2 115 49.6
Prupe.3G289300 Prunus persica HOM05D008092 ORTHO05D010277 1.5e-25 119.8 115 51.3
Phvul.004G010900 Phaseolus vulgaris HOM05D008092 ORTHO05D010277 4.4e-25 118.2 121 50.4
Actinidia06006 Actinidia chinensis HOM05D008092 ORTHO05D010277 2.2e-24 115.9 115 52.2
CSS0000484 Camellia sinensis var. sinensis HOM05D008092 ORTHO05D010277 2.2e-24 115.9 115 51.3
CSS0015151 Camellia sinensis var. sinensis HOM05D008092 ORTHO05D010277 2.2e-24 115.9 115 51.3
Glyma.19G005600 Glycine max HOM05D008092 ORTHO05D010277 6.3e-24 114.4 112 50.9
Glyma.05G005000 Glycine max HOM05D008092 ORTHO05D010277 8.2e-24 114.0 112 53.6
Lj2g0022146 Lotus japonicus HOM05D008092 ORTHO05D010277 1.4e-23 113.2 122 46.7
MBI10_g44380_MAGBIO Magnolia biondii HOM05D008092 ORTHO05D010277 1.4e-23 113.2 115 47.0
MD17G1030500 Malus domestica HOM05D008092 ORTHO05D010277 1.4e-23 113.2 111 51.4
Lsat_1_v5_gn_4_183520 Lactuca sativa HOM05D008092 ORTHO05D010277 3.1e-23 112.1 129 44.2
vmacro05852 Vaccinium macrocarpon HOM05D008092 ORTHO05D010277 5.3e-23 111.3 119 47.1
Cc00_g25440 Coffea canephora HOM05D008092 ORTHO05D010277 7.0e-23 110.9 126 42.1
HanXRQChr09g0255051 Helianthus annuus HOM05D008092 ORTHO05D010277 7.0e-23 110.9 118 45.8
CsaV3_3G042670 Cucumis sativus L. HOM05D008092 ORTHO05D010277 1.6e-22 109.8 116 47.4
arahy.Tifrunner.gnm1.ann1.KZ8L38 Arachis hypogaea HOM05D008092 ORTHO05D010277 2.0e-22 109.4 125 47.2
arahy.Tifrunner.gnm1.ann1.M07V8F Arachis hypogaea HOM05D008092 ORTHO05D010277 2.0e-22 109.4 125 47.2
Nitab4.5_0000118g0190 Nicotiana tabacum HOM05D008092 ORTHO05D010277 2.7e-22 109.0 128 41.4
Psat1g056120 Pisum sativum HOM05D008092 ORTHO05D010277 2.7e-22 109.0 119 47.9
Lalb_Chr02g0156941 Lupinus albus HOM05D008092 ORTHO05D010277 3.5e-22 108.6 107 49.5
VMungo0464G1885 Vigna mungo HOM05D008092 ORTHO05D010277 3.8e-21 105.1 115 47.0
Sc03g0007590 Simmondsia chinensis HOM05D008092 ORTHO05D010277 6.5e-21 104.4 116 43.1
TPR.G14075 Trifolium pratense HOM05D008092 ORTHO05D010277 6.5e-21 104.4 125 44.8
HPP92_003083 Vanilla planifolia HOM05D008092 ORTHO05D010277 3.2e-20 102.1 111 45.0
Cpa.g.sc108.51 Carica papaya HOM05D008092 ORTHO05D010277 2.7e-19 99.0 104 46.2
Medtr6g005430 Medicago truncatula HOM05D008092 ORTHO05D010277 3.6e-19 98.6 107 46.7
Rhsim10G0018500 Rhododendron simsii HOM05D008092 ORTHO05D010277 4.0e-18 95.1 149 38.3
DCAR_021714 Daucus carota HOM05D008092 ORTHO05D010277 1.2e-17 93.6 109 44.0
ECA232G1487 Erigeron canadensis HOM05D008092 ORTHO05D010277 1.6e-14 83.2 101 44.6
Mapoly0035s0098 Marchantia polymorpha HOM05D008092 ORTHO05D010277 2.7e-14 82.4 112 35.7
Haze_14721 Corylus avellana HOM05D008092 ORTHO05D010277 2.2e-13 79.3 59 62.7
Haze_14716 Corylus avellana HOM05D008092 ORTHO05D010277 6.5e-13 77.8 64 57.8
Pp3c2_13540 Physcomitrium patens HOM05D008092 ORTHO05D010277 1.5e-12 76.6 111 36.0
Nitab4.5_0002306g0010 Nicotiana tabacum HOM05D008092 ORTHO05D010277 2.7e-11 72.4 82 39.0
Oeu063467.1 Olea europaea HOM05D008092 ORTHO05D010277 4.0e-10 68.6 88 39.8
MELO3C009977.2 Cucumis melo HOM05D008092 ORTHO05D010277 1.2e-09 67.0 57 54.4
PSO478G3237 Papaver somniferum HOM05D008092 ORTHO05D010277 1.2e-09 67.0 70 47.1
PSO017G5173 Papaver somniferum HOM05D008092 ORTHO05D010277 3.4e-09 65.5 70 45.7
TPR.G15211 Trifolium pratense HOM05D008092 ORTHO05D010277 3.7e-08 62.0 80 38.8
Nn3g16773 Nelumbo nucifera HOM05D008092 ORTHO05D010277 4.1e-07 58.5 51 49.0
SEGI_08853 Sequoiadendron giganteum HOM05D008092 ORTHO05D004758 7.0e-07 57.8 58 39.7
TPR.G11017 Trifolium pratense HOM05D008092 ORTHO05D010277 7.0e-07 57.8 44 61.4
HanXRQChr09g0268661 Helianthus annuus HOM05D008092 ORTHO05D010277 2.7e-06 55.8 64 43.8


User provided reference genes

Program Settings