Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Eucgr.I01735 Eucalyptus grandis HOM05D005844 ORTHO05D007203 5.1e-148 527.7 262 100.0
PGR142G0612 Punica granatum HOM05D005844 ORTHO05D007203 9.0e-105 384.0 259 73.4
Actinidia36121 Actinidia chinensis HOM05D005844 ORTHO05D007203 1.3e-103 380.2 240 74.2
Cfa007347 Carpinus fangiana HOM05D005844 ORTHO05D007203 1.3e-103 380.2 239 77.0
Ciclev10016139m.g Citrus clementina HOM05D005844 ORTHO05D007203 2.9e-103 379.0 254 72.4
Potri.001G344000 Populus trichocarpa HOM05D005844 ORTHO05D007203 1.9e-102 376.3 262 71.4
Dinv09631 Davidia involucrata HOM05D005844 ORTHO05D007203 5.5e-102 374.8 249 71.9
RcHm_v2.0_Chr2g0173161 Rosa chinensis HOM05D005844 ORTHO05D007203 1.6e-101 373.2 261 69.3
Actinidia05987 Actinidia chinensis HOM05D005844 ORTHO05D007203 3.5e-101 372.1 258 70.5
Dinv33434 Davidia involucrata HOM05D005844 ORTHO05D007203 1.0e-100 370.5 249 71.1
TWI56G0011 Tripterygium wilfordii HOM05D005844 ORTHO05D007203 1.3e-100 370.2 274 69.0
Hma1.2p1_2550F.1_g324230 Hydrangea macrophylla HOM05D005844 ORTHO05D007203 2.3e-100 369.4 250 72.8
TWI36G0829 Tripterygium wilfordii HOM05D005844 ORTHO05D007203 2.3e-100 369.4 230 75.2
Thecc.04G018700 Theobroma cacao HOM05D005844 ORTHO05D007203 3.9e-100 368.6 226 77.4
Aqoxy5G03753 Aquilegia oxysepala HOM05D005844 ORTHO05D007203 8.7e-100 367.5 254 69.7
CiPaw.03G045000 Carya illinoinensis HOM05D005844 ORTHO05D007203 1.1e-99 367.1 290 65.5
SalBow7G1242 Salvia bowleyana HOM05D005844 ORTHO05D007203 1.9e-99 366.3 239 74.5
Nn4g22606 Nelumbo nucifera HOM05D005844 ORTHO05D007203 3.3e-99 365.5 242 72.3
CSS0012729 Camellia sinensis var. sinensis HOM05D005844 ORTHO05D007203 4.3e-99 365.2 247 71.3
MSTRG.3288 Avicennia marina HOM05D005844 ORTHO05D007203 5.7e-99 364.8 278 68.0
Medtr2g062880 Medicago truncatula HOM05D005844 ORTHO05D007203 9.7e-99 364.0 250 70.8
Medtr7g033530 Medicago truncatula HOM05D005844 ORTHO05D007203 9.7e-99 364.0 253 71.1
THA.LOC104823955 Tarenaya hassleriana HOM05D005844 ORTHO05D007203 9.7e-99 364.0 263 68.1
FAN05G4937 Fragaria x ananassa HOM05D005844 ORTHO05D007203 1.3e-98 363.6 277 65.3
FAN09G1449 Fragaria x ananassa HOM05D005844 ORTHO05D007203 4.8e-98 361.7 277 65.3
Phvul.004G044500 Phaseolus vulgaris HOM05D005844 ORTHO05D007203 6.3e-98 361.3 261 67.8
ECA247G4055 Erigeron canadensis HOM05D005844 ORTHO05D007203 8.2e-98 360.9 266 67.7
Solyc02g093390.4 Solanum lycopersicum HOM05D005844 ORTHO05D007203 8.2e-98 360.9 234 75.2
Gorai.012G064700 Gossypium raimondii HOM05D005844 ORTHO05D007203 1.8e-97 359.8 262 70.6
THA.LOC104805364 Tarenaya hassleriana HOM05D005844 ORTHO05D007203 1.8e-97 359.8 264 67.4
VMungo0464G1123 Vigna mungo HOM05D005844 ORTHO05D007203 1.8e-97 359.8 236 72.0
Duzib187G1685 Durio zibethinus HOM05D005844 ORTHO05D007203 2.4e-97 359.4 258 68.6
FvH4_6g51630 Fragaria vesca HOM05D005844 ORTHO05D007203 2.4e-97 359.4 277 65.3
vmacro05871 Vaccinium macrocarpon HOM05D005844 ORTHO05D007203 2.4e-97 359.4 292 63.4
Lj1g0026070 Lotus japonicus HOM05D005844 ORTHO05D007203 3.1e-97 359.0 239 72.4
COL.COLO4_29165 Corchorus olitorius HOM05D005844 ORTHO05D007203 4.1e-97 358.6 221 77.8
FAN14G2428 Fragaria x ananassa HOM05D005844 ORTHO05D007203 5.3e-97 358.2 277 65.3
Cpa.g.c26638.3 Carica papaya HOM05D005844 ORTHO05D007203 6.9e-97 357.8 262 67.2
Gohir.D04G058000 Gossypium hirsutum HOM05D005844 ORTHO05D007203 1.5e-96 356.7 264 69.3
Cc07_g01570 Coffea canephora HOM05D005844 ORTHO05D007203 2.0e-96 356.3 234 72.2
Nitab4.5_0003318g0030 Nicotiana tabacum HOM05D005844 ORTHO05D007203 2.0e-96 356.3 275 66.9
GSVIVG01032391001 Vitis vinifera HOM05D005844 ORTHO05D007203 2.0e-96 356.3 221 75.1
FAN02G1237 Fragaria x ananassa HOM05D005844 ORTHO05D007203 2.6e-96 355.9 277 64.3
PGSC0003DMG400012605 Solanum tuberosum HOM05D005844 ORTHO05D007203 2.6e-96 355.9 275 67.3
QL02p074142 Quercus lobata HOM05D005844 ORTHO05D007203 4.5e-96 355.1 275 64.4
Sc16g0003190 Simmondsia chinensis HOM05D005844 ORTHO05D007203 4.5e-96 355.1 221 75.1
HanXRQChr02g0043121 Helianthus annuus HOM05D005844 ORTHO05D007203 5.9e-96 354.8 235 72.3
MD17G1023500 Malus domestica HOM05D005844 ORTHO05D007203 1.0e-95 354.0 255 67.1
Rhsim10G0015300 Rhododendron simsii HOM05D005844 ORTHO05D007203 1.0e-95 354.0 257 67.3
Rhsim10G0016000 Rhododendron simsii HOM05D005844 ORTHO05D007203 1.0e-95 354.0 257 67.3
Gohir.A05G355200 Gossypium hirsutum HOM05D005844 ORTHO05D007203 1.3e-95 353.6 264 68.6
ClCG09G019300 Citrullus lanatus HOM05D005844 ORTHO05D007203 1.7e-95 353.2 281 63.7
Dinv07356 Davidia involucrata HOM05D005844 ORTHO05D007203 2.9e-95 352.4 250 68.4
Carub.0007s3499 Capsella rubella HOM05D005844 ORTHO05D007203 3.8e-95 352.1 245 67.8
Migut.K01404 Erythranthe guttata HOM05D005844 ORTHO05D007203 8.5e-95 350.9 279 65.6
AL7G49290 Arabidopsis lyrata HOM05D005844 ORTHO05D007203 1.4e-94 350.1 230 70.9
arahy.Tifrunner.gnm1.ann1.RG8FT8 Arachis hypogaea HOM05D005844 ORTHO05D007203 1.4e-94 350.1 221 72.9
Prupe.3G293000 Prunus persica HOM05D005844 ORTHO05D007203 1.4e-94 350.1 250 68.0
Sabra16G0223300 Salix brachista HOM05D005844 ORTHO05D007203 3.2e-94 349.0 279 64.9
DCAR_021727 Daucus carota HOM05D005844 ORTHO05D007203 4.2e-94 348.6 221 72.4
CsaV3_5G027090 Cucumis sativus L. HOM05D005844 ORTHO05D007203 7.2e-94 347.8 281 63.3
Sp7g01340 Schrenkiella parvula HOM05D005844 ORTHO05D007203 7.2e-94 347.8 258 64.7
BcaB06g27527 Brassica carinata HOM05D005844 ORTHO05D007203 9.4e-94 347.4 234 69.2
Thhalv10027875m.g Eutrema salsugineum HOM05D005844 ORTHO05D007203 1.6e-93 346.7 255 63.9
Sopen02g037980 Solanum pennellii HOM05D005844 ORTHO05D007203 2.1e-93 346.3 275 65.5
Lalb_Chr08g0243241 Lupinus albus HOM05D005844 ORTHO05D007203 3.6e-93 345.5 229 70.7
Aa31LG9G1090 Aethionema arabicum HOM05D005844 ORTHO05D007203 7.9e-93 344.4 230 68.7
AT5G40530 Arabidopsis thaliana HOM05D005844 ORTHO05D007203 1.0e-92 344.0 256 65.2
CANSAT64G0956 Cannabis sativa HOM05D005844 ORTHO05D007203 1.8e-92 343.2 286 61.5
Cfa007344 Carpinus fangiana HOM05D005844 ORTHO05D007203 2.3e-92 342.8 252 69.0
A04p13570 Brassica napus HOM05D005844 ORTHO05D007203 3.0e-92 342.4 243 66.3
Haze_14753 Corylus avellana HOM05D005844 ORTHO05D007203 6.7e-92 341.3 269 64.3
unitig_46.g18705 Utricularia gibba HOM05D005844 ORTHO05D007203 6.7e-92 341.3 279 63.1
C04p47350 Brassica napus HOM05D005844 ORTHO05D007203 8.8e-92 340.9 247 65.2
PSO407G0181 Papaver somniferum HOM05D005844 ORTHO05D007203 2.0e-91 339.7 248 68.5
SGA_v2.0_scaffold18G08274 Striga asiatica HOM05D005844 ORTHO05D007203 2.5e-91 339.3 229 70.3
Nitab4.5_0001860g0130 Nicotiana tabacum HOM05D005844 ORTHO05D007203 4.3e-91 338.6 246 69.5
Zm00001eb205620 Zea mays HOM05D005844 ORTHO05D007203 7.4e-91 337.8 227 69.6
BcaB02g07945 Brassica carinata HOM05D005844 ORTHO05D007203 2.8e-90 335.9 279 62.0
ATR0824G194 Amborella trichopoda HOM05D005844 ORTHO05D007203 3.7e-90 335.5 253 65.2
Os02g0593900 Oryza sativa ssp. japonica HOM05D005844 ORTHO05D007203 4.8e-90 335.1 247 66.4
Manes.15G150500 Manihot esculenta HOM05D005844 ORTHO05D007203 1.1e-89 334.0 255 66.7
PSO111G0092 Papaver somniferum HOM05D005844 ORTHO05D007203 1.1e-89 334.0 248 67.7
Glyma.19G056800 Glycine max HOM05D005844 ORTHO05D007203 6.9e-89 331.3 259 66.8
HPP92_020245 Vanilla planifolia HOM05D005844 ORTHO05D007203 2.0e-88 329.7 275 60.4
CSS0002651 Camellia sinensis var. sinensis HOM05D005844 ORTHO05D007203 1.7e-87 326.6 247 66.8
Psat4g044480 Pisum sativum HOM05D005844 ORTHO05D007203 5.0e-87 325.1 290 58.3
MELO3C021585.2 Cucumis melo HOM05D005844 ORTHO05D007203 1.2e-85 320.5 281 60.1
Glyma.16G069400 Glycine max HOM05D005844 ORTHO05D007203 3.9e-84 315.5 246 66.7
CDE09G0856 Ceratophyllum demersum HOM05D005844 ORTHO05D007203 4.4e-83 312.0 201 72.1
Ca_08532_v3 Cicer arietinum L. HOM05D005844 ORTHO05D007203 1.4e-81 307.0 269 60.2
PSO754G0028 Papaver somniferum HOM05D005844 ORTHO05D007203 2.6e-80 302.8 250 60.8
Ca_25854_v3 Cicer arietinum L. HOM05D005844 ORTHO05D007203 3.5e-80 302.4 221 66.5
arahy.Tifrunner.gnm1.ann1.V6CENM Arachis hypogaea HOM05D005844 ORTHO05D007203 2.9e-79 299.3 259 59.1
Sed0014974 Sechium edule HOM05D005844 ORTHO05D007203 5.0e-79 298.5 235 66.0
SMO169G0126 Selaginella moellendorffii HOM05D005844 ORTHO05D007203 5.0e-79 298.5 221 63.8
AagrBONN_evm.TU.Sc2ySwM_344.1282 Anthoceros agrestis HOM05D005844 ORTHO05D007203 4.2e-78 295.4 237 62.0
Pp3c18_8570 Physcomitrium patens HOM05D005844 ORTHO05D007203 4.2e-78 295.4 226 62.4
VMungo1215G2157 Vigna mungo HOM05D005844 ORTHO05D007203 5.5e-78 295.0 223 65.5
BolC4t26336H Brassica oleracea HOM05D005844 ORTHO05D007203 2.1e-77 293.1 228 62.3
Mapoly0055s0119 Marchantia polymorpha HOM05D005844 ORTHO05D007203 2.1e-77 293.1 230 59.1
BraA04t17017Z Brassica rapa HOM05D005844 ORTHO05D007203 8.8e-76 287.7 244 59.4
CBR_g37477 Chara braunii HOM05D005844 ORTHO05D007203 3.3e-75 285.8 223 61.9
Lj7A600G48 Lonicera japonica HOM05D005844 ORTHO05D007203 5.7e-75 285.0 183 72.7
TAR629G2614 Trochodendron aralioides HOM05D005844 ORTHO05D007203 1.8e-73 280.0 227 63.0
MBI06_g16054_MAGBIO Magnolia biondii HOM05D005844 ORTHO05D007203 2.4e-73 279.6 261 57.1
Peaxi162Scf00129g01647 Petunia axillaris HOM05D005844 ORTHO05D007203 2.4e-73 279.6 183 73.2
EL10Ac6g14092 Beta vulgaris HOM05D005844 ORTHO05D007203 4.1e-73 278.9 258 57.0
Hma1.2p1_1747F.1_g300470 Hydrangea macrophylla HOM05D005844 ORTHO05D007203 2.6e-72 276.2 183 72.7
CARHR261450 Cardamine hirsuta HOM05D005844 ORTHO05D007203 2.2e-71 273.1 179 71.5
Lsat_1_v5_gn_1_11001 Lactuca sativa HOM05D005844 ORTHO05D007203 6.8e-68 261.5 176 72.7
Cfa007349 Carpinus fangiana HOM05D005844 ORTHO05D007203 4.1e-65 252.3 246 58.5
CAN.G473.16 Capsicum annuum HOM05D005844 ORTHO05D007203 1.0e-63 247.7 163 73.0
Ah.03g137020 Amaranthus hybridus HOM05D001812 ORTHO05D001874 2.8e-58 229.6 191 60.7
MCO16G365 Micromonas commoda HOM05D005844 ORTHO05D007203 5.4e-57 225.3 233 51.9
Cre07.g323450 Chlamydomonas reinhardtii HOM05D005844 ORTHO05D007203 3.5e-48 196.1 265 41.1
TPR.G1078 Trifolium pratense HOM05D005844 ORTHO05D007203 6.6e-47 191.8 123 73.2
SHI16461 Sapria himalayana HOM05D005844 ORTHO05D007203 7.3e-46 188.3 309 37.9
vmacro09039 Vaccinium macrocarpon HOM05D005844 ORTHO05D007203 2.8e-45 186.4 267 43.1
Atru.chr6.2417 Acer truncatum HOM05D005844 ORTHO05D007203 4.0e-44 182.6 116 73.3
PRCOL_00001214 Prasinoderma coloniale HOM05D005844 ORTHO05D007203 3.7e-42 176.0 261 39.8
TPR.G11046 Trifolium pratense HOM05D005844 ORTHO05D007203 4.9e-42 175.6 143 61.5
TPR.G35964 Trifolium pratense HOM05D005844 ORTHO05D007203 1.6e-40 170.6 113 70.8
TAR629G1250 Trochodendron aralioides HOM05D005844 ORTHO05D007203 4.3e-38 162.5 127 59.8
SMO202G0011 Selaginella moellendorffii HOM05D005844 ORTHO05D007203 6.6e-31 138.7 116 60.3
Atru.chr2.3681 Acer truncatum HOM05D005844 ORTHO05D007203 8.9e-28 128.3 77 75.3
BolC4t27198H Brassica oleracea HOM05D005844 ORTHO05D007203 1.5e-27 127.5 130 54.6
Cfa024741 Carpinus fangiana HOM05D005844 ORTHO05D007203 1.4e-25 120.9 328 28.7
Rhsim10G0015100 Rhododendron simsii HOM05D014363 ORTHO05D019497 1.9e-25 120.6 78 69.2
SEGI_32629 Sequoiadendron giganteum HOM05D005844 ORTHO05D007203 6.6e-23 112.1 81 64.2
QL12p001810 Quercus lobata HOM05D005844 ORTHO05D007203 2.5e-22 110.2 71 71.8
AUR62043289 Chenopodium quinoa HOM05D005844 ORTHO05D007203 9.3e-17 91.7 77 57.1
CARHR261460 Cardamine hirsuta HOM05D005844 ORTHO05D007203 6.6e-15 85.5 56 67.9
SHI16462 Sapria himalayana HOM05D005844 ORTHO05D007203 2.7e-08 63.5 102 43.1


User provided reference genes

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