Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Eucgr.I01730 Eucalyptus grandis HOM05D005478 ORTHO05D006426 3.2e-90 335.5 227 100.0
PGR142G0633 Punica granatum HOM05D005478 ORTHO05D006426 3.5e-36 156.0 195 52.8
Ciclev10016916m.g Citrus clementina HOM05D005478 ORTHO05D006426 5.9e-36 155.2 179 55.3
Haze_14759 Corylus avellana HOM05D005478 ORTHO05D006426 5.5e-34 148.7 202 55.0
GSVIVG01032384001 Vitis vinifera HOM05D005478 ORTHO05D006426 2.1e-33 146.7 182 46.2
TWI36G1604 Tripterygium wilfordii HOM05D005478 ORTHO05D006426 1.8e-32 143.7 190 46.8
CiPaw.03G045600 Carya illinoinensis HOM05D005478 ORTHO05D006426 3.0e-32 142.9 194 45.9
Cfa007338 Carpinus fangiana HOM05D005478 ORTHO05D006426 6.8e-32 141.7 193 54.4
Prupe.3G293900 Prunus persica HOM05D005478 ORTHO05D006426 1.5e-31 140.6 195 44.6
Duzib235G1061 Durio zibethinus HOM05D005478 ORTHO05D006426 2.0e-31 140.2 196 43.4
COL.COLO4_30424 Corchorus olitorius HOM05D005478 ORTHO05D006426 4.4e-31 139.0 199 42.2
Duzib160G0719 Durio zibethinus HOM05D005478 ORTHO05D006426 4.4e-31 139.0 194 40.7
QL02p074001 Quercus lobata HOM05D005478 ORTHO05D006426 4.4e-31 139.0 178 45.5
TWI56G0849 Tripterygium wilfordii HOM05D005478 ORTHO05D006426 5.7e-31 138.7 191 42.4
CsaV3_3G042880 Cucumis sativus L. HOM05D005478 ORTHO05D006426 1.3e-30 137.5 180 41.1
MELO3C026588.2 Cucumis melo HOM05D005478 ORTHO05D006426 4.8e-30 135.6 180 42.2
ClCG10G013780 Citrullus lanatus HOM05D005478 ORTHO05D006426 1.1e-29 134.4 180 40.6
TWI12G0237 Tripterygium wilfordii HOM05D005478 ORTHO05D006426 1.8e-29 133.7 194 43.8
Atru.chr6.2431 Acer truncatum HOM05D005478 ORTHO05D006426 5.4e-29 132.1 179 52.5
arahy.Tifrunner.gnm1.ann1.47572L Arachis hypogaea HOM05D005478 ORTHO05D006426 5.4e-29 132.1 182 58.2
CiPaw.04G029700 Carya illinoinensis HOM05D005478 ORTHO05D006426 5.4e-29 132.1 182 42.9
Thecc.06G091700 Theobroma cacao HOM05D005478 ORTHO05D006426 7.0e-29 131.7 195 50.8
Cpa.g.sc108.77 Carica papaya HOM05D005478 ORTHO05D006426 1.2e-28 131.0 183 43.7
Gohir.D09G082100 Gossypium hirsutum HOM05D005478 ORTHO05D006426 2.7e-28 129.8 194 56.2
Gorai.006G097900 Gossypium raimondii HOM05D005478 ORTHO05D006426 2.7e-28 129.8 194 56.2
Hma1.2p1_0818F.1_g223270 Hydrangea macrophylla HOM05D005478 ORTHO05D006426 1.7e-27 127.1 195 39.0
Gohir.A09G082300 Gossypium hirsutum HOM05D005478 ORTHO05D006426 5.0e-27 125.6 193 50.8
Lj2g0025845 Lotus japonicus HOM05D005478 ORTHO05D006426 1.1e-26 124.4 180 55.0
Sp2g16690 Schrenkiella parvula HOM05D005478 ORTHO05D006426 1.5e-26 124.0 194 39.7
Lalb_Chr22g0360721 Lupinus albus HOM05D005478 ORTHO05D006426 1.9e-26 123.6 181 39.8
Duzib192G0894 Durio zibethinus HOM05D005478 ORTHO05D006426 2.5e-26 123.2 192 41.1
TAR371G0105 Trochodendron aralioides HOM05D005478 ORTHO05D006426 2.5e-26 123.2 180 45.6
Rhsim10G0014600 Rhododendron simsii HOM05D005478 ORTHO05D006426 3.2e-26 122.9 181 53.0
Sed0022021 Sechium edule HOM05D005478 ORTHO05D006426 3.2e-26 122.9 192 35.9
THA.LOC104825319 Tarenaya hassleriana HOM05D005478 ORTHO05D006426 2.7e-25 119.8 181 37.0
arahy.Tifrunner.gnm1.ann1.WAXE9D Arachis hypogaea HOM05D005478 ORTHO05D006426 4.7e-25 119.0 208 51.4
Medtr6g004420 Medicago truncatula HOM05D005478 ORTHO05D006426 4.7e-25 119.0 178 42.1
MSTRG.3284 Avicennia marina HOM05D005478 ORTHO05D006426 6.1e-25 118.6 186 41.9
Actinidia36124 Actinidia chinensis HOM05D005478 ORTHO05D006426 8.0e-25 118.2 183 39.9
Aa31LG2G5140 Aethionema arabicum HOM05D005478 ORTHO05D006426 8.0e-25 118.2 194 33.5
Potri.001G343200 Populus trichocarpa HOM05D005478 ORTHO05D006426 2.3e-24 116.7 195 38.5
Hund15527 Selenicereus undatus HOM05D005478 ORTHO05D006426 2.3e-24 116.7 191 38.7
TAR629G3442 Trochodendron aralioides HOM05D005478 ORTHO05D006426 3.0e-24 116.3 183 47.0
AL5G16940 Arabidopsis lyrata HOM05D005478 ORTHO05D006426 4.0e-24 115.9 200 36.5
Oeu033728.1 Olea europaea HOM05D005478 ORTHO05D006426 4.0e-24 115.9 185 48.6
TPR.G31952 Trifolium pratense HOM05D005478 ORTHO05D006426 5.2e-24 115.5 179 44.1
VMungo0464G1533 Vigna mungo HOM05D005478 ORTHO05D006426 6.8e-24 115.2 182 36.8
CANSAT64G0255 Cannabis sativa HOM05D005478 ORTHO05D006426 8.8e-24 114.8 192 40.6
CARHR148890 Cardamine hirsuta HOM05D005478 ORTHO05D006426 8.8e-24 114.8 195 37.4
Glyma.05G002400 Glycine max HOM05D005478 ORTHO05D006426 1.2e-23 114.4 179 38.5
Thhalv10004961m.g Eutrema salsugineum HOM05D005478 ORTHO05D006426 2.0e-23 113.6 194 35.1
MD17G1022200 Malus domestica HOM05D005478 ORTHO05D006426 2.0e-23 113.6 191 50.8
Manes.17G111100 Manihot esculenta HOM05D005478 ORTHO05D006426 2.0e-23 113.6 195 39.5
Sabra16G0222600 Salix brachista HOM05D005478 ORTHO05D006426 2.0e-23 113.6 187 37.4
AUR62041940 Chenopodium quinoa HOM05D005478 ORTHO05D006426 2.6e-23 113.2 196 34.2
Lalb_Chr24g0403571 Lupinus albus HOM05D005478 ORTHO05D006426 2.6e-23 113.2 183 50.3
DCAR_011260 Daucus carota HOM05D005478 ORTHO05D006426 3.4e-23 112.8 184 44.0
Carub.0005s0595 Capsella rubella HOM05D005478 ORTHO05D006426 1.7e-22 110.5 186 37.1
MD09G1022900 Malus domestica HOM05D005478 ORTHO05D006426 1.7e-22 110.5 194 38.7
Sc07g0003180 Simmondsia chinensis HOM05D005478 ORTHO05D006426 2.2e-22 110.2 195 45.1
AT3G27520 Arabidopsis thaliana HOM05D005478 ORTHO05D006426 2.8e-22 109.8 201 33.8
AUR62028419 Chenopodium quinoa HOM05D005478 ORTHO05D006426 2.8e-22 109.8 182 34.6
Ca_04142_v3 Cicer arietinum L. HOM05D005478 ORTHO05D006426 2.8e-22 109.8 179 45.3
BcaB04g19441 Brassica carinata HOM05D005478 ORTHO05D006426 6.3e-22 108.6 183 38.8
Glyma.19G002600 Glycine max HOM05D005478 ORTHO05D006426 6.3e-22 108.6 179 48.0
Actinidia18441 Actinidia chinensis HOM05D005478 ORTHO05D006426 8.3e-22 108.2 181 37.6
MSTRG.15534 Avicennia marina HOM05D005478 ORTHO05D006426 1.1e-21 107.8 181 38.1
BraA09t35982Z Brassica rapa HOM05D005478 ORTHO05D006426 1.1e-21 107.8 180 36.7
Actinidia05981 Actinidia chinensis HOM05D005478 ORTHO05D006426 1.4e-21 107.5 180 42.8
Phvul.004G004600 Phaseolus vulgaris HOM05D005478 ORTHO05D006426 1.8e-21 107.1 184 50.0
SGA_v2.0_scaffold47G17517 Striga asiatica HOM05D005478 ORTHO05D006426 1.8e-21 107.1 181 39.2
BcaC06g30982 Brassica carinata HOM05D005478 ORTHO05D006426 2.4e-21 106.7 181 37.0
A09p03440 Brassica napus HOM05D005478 ORTHO05D006426 2.4e-21 106.7 180 36.7
FAN02G1690 Fragaria x ananassa HOM05D005478 ORTHO05D006426 5.4e-21 105.5 191 42.9
Migut.K01412 Erythranthe guttata HOM05D005478 ORTHO05D006426 1.2e-20 104.4 185 45.4
FAN05G2721 Fragaria x ananassa HOM05D005478 ORTHO05D006426 1.6e-20 104.0 191 42.4
SGA_v2.0_scaffold30G12408 Striga asiatica HOM05D005478 ORTHO05D006426 2.0e-20 103.6 179 54.2
Oeu048609.1 Olea europaea HOM05D005478 ORTHO05D006426 2.7e-20 103.2 183 51.4
CSS0007505 Camellia sinensis var. sinensis HOM05D005478 ORTHO05D006426 3.5e-20 102.8 180 50.0
Thhalv10027961m.g Eutrema salsugineum HOM05D005478 ORTHO05D006426 5.9e-20 102.1 185 33.5
Lsat_1_v5_gn_0_18280 Lactuca sativa HOM05D005478 ORTHO05D006426 5.9e-20 102.1 183 37.2
vmacro05877 Vaccinium macrocarpon HOM05D005478 ORTHO05D006426 1.3e-19 100.9 215 44.7
BcaC04g23900 Brassica carinata HOM05D005478 ORTHO05D006426 1.7e-19 100.5 182 38.5
A06p41110 Brassica napus HOM05D005478 ORTHO05D006426 1.7e-19 100.5 177 33.9
C09p03650 Brassica napus HOM05D005478 ORTHO05D006426 1.7e-19 100.5 182 38.5
BraA06t27034Z Brassica rapa HOM05D005478 ORTHO05D006426 1.7e-19 100.5 177 33.9
FvH4_6g51790 Fragaria vesca HOM05D005478 ORTHO05D006426 2.3e-19 100.1 192 41.7
FAN09G1593 Fragaria x ananassa HOM05D005478 ORTHO05D006426 2.3e-19 100.1 204 41.7
Nn3g16686 Nelumbo nucifera HOM05D005478 ORTHO05D006426 2.3e-19 100.1 180 50.0
unitig_88.g27693 Utricularia gibba HOM05D000631 ORTHO05D000524 2.3e-19 100.1 184 35.9
BolC9t53284H Brassica oleracea HOM05D005478 ORTHO05D006426 2.9e-19 99.8 182 36.3
FAN14G4849 Fragaria x ananassa HOM05D005478 ORTHO05D006426 2.9e-19 99.8 192 42.7
PSO478G1356 Papaver somniferum HOM05D005478 ORTHO05D006426 3.8e-19 99.4 182 38.5
C07p36630 Brassica napus HOM05D005478 ORTHO05D006426 8.6e-19 98.2 187 34.8
PSO017G4510 Papaver somniferum HOM05D005478 ORTHO05D006426 2.5e-18 96.7 181 37.0
PGSC0003DMG400012636 Solanum tuberosum HOM05D005478 ORTHO05D006426 2.5e-18 96.7 182 35.2
BolC7t44179H Brassica oleracea HOM05D005478 ORTHO05D006426 5.6e-18 95.5 199 34.2
ATR0824G160 Amborella trichopoda HOM05D005478 ORTHO05D006426 7.2e-18 95.1 181 33.1
BcaC06g33809 Brassica carinata HOM05D005478 ORTHO05D006426 7.2e-18 95.1 187 34.8
RcHm_v2.0_Chr2g0173291 Rosa chinensis HOM05D005478 ORTHO05D006426 7.2e-18 95.1 127 40.9
Aqoxy5G03740 Aquilegia oxysepala HOM05D005478 ORTHO05D006426 9.5e-18 94.7 188 30.3
Psat1g053440 Pisum sativum HOM05D005478 ORTHO05D006426 2.1e-17 93.6 180 37.8
MBI14_g36718_MAGBIO Magnolia biondii HOM05D005478 ORTHO05D006426 2.8e-17 93.2 180 46.7
Lsat_1_v5_gn_2_91160 Lactuca sativa HOM05D005478 ORTHO05D006426 3.6e-17 92.8 182 47.8
CDE09G0806 Ceratophyllum demersum HOM05D005478 ORTHO05D006426 6.1e-17 92.0 183 28.4
Sopen02g038220 Solanum pennellii HOM05D005478 ORTHO05D006426 1.4e-16 90.9 182 33.5
Solyc02g093450.3 Solanum lycopersicum HOM05D005478 ORTHO05D006426 1.8e-16 90.5 182 33.5
HPP92_006182 Vanilla planifolia HOM05D005478 ORTHO05D006426 5.2e-16 89.0 177 32.2
HanXRQChr14g0451171 Helianthus annuus HOM05D005478 ORTHO05D006426 6.8e-16 88.6 181 45.9
vmacro18294 Vaccinium macrocarpon HOM05D005478 ORTHO05D006426 6.8e-16 88.6 215 40.9
Peaxi162Scf00700g00430 Petunia axillaris HOM05D005478 ORTHO05D006426 3.4e-15 86.3 178 34.3
Ah.02g128220 Amaranthus hybridus HOM05D005478 ORTHO05D006426 4.4e-15 85.9 193 32.6
THA.LOC104825211 Tarenaya hassleriana HOM05D005478 ORTHO05D006426 7.5e-15 85.1 126 37.3
ECA238G3024 Erigeron canadensis HOM05D005478 ORTHO05D006426 2.2e-14 83.6 180 41.7
CDE02G4674 Ceratophyllum demersum HOM05D005478 ORTHO05D006426 3.7e-14 82.8 189 27.0
HanXRQChr07g0199031 Helianthus annuus HOM05D005478 ORTHO05D006426 4.9e-14 82.4 181 37.6
Os02g0595300 Oryza sativa ssp. japonica HOM05D005478 ORTHO05D006426 2.4e-13 80.1 182 44.0
Aqoxy1G02464 Aquilegia oxysepala HOM05D005478 ORTHO05D006426 1.2e-12 77.8 161 29.8
PSO063G0871 Papaver somniferum HOM05D005478 ORTHO05D006426 1.6e-12 77.4 184 27.7
Gohir.D05G130900 Gossypium hirsutum HOM05D005478 ORTHO05D006426 2.7e-12 76.6 120 49.2
PSO754G0087 Papaver somniferum HOM05D005478 ORTHO05D006426 2.3e-11 73.6 184 27.7
SEGI_00200 Sequoiadendron giganteum HOM05D005478 ORTHO05D006426 6.6e-11 72.0 177 27.7
Dinv25725 Davidia involucrata HOM05D005478 ORTHO05D006426 1.9e-10 70.5 86 57.0
Dinv33426 Davidia involucrata HOM05D005478 ORTHO05D006426 2.5e-10 70.1 50 68.0
EL10Ac6g14100 Beta vulgaris HOM05D005478 ORTHO05D006426 1.8e-08 63.9 127 42.5
Cc07_g01510 Coffea canephora HOM05D005478 ORTHO05D006426 1.8e-08 63.9 59 55.9
Lju41C43G9 Lonicera japonica HOM05D005478 ORTHO05D006426 6.8e-08 62.0 88 61.4
Nn3g16214 Nelumbo nucifera HOM05D005478 ORTHO05D006426 1.7e-06 57.4 49 55.1
Oeu018990.1 Olea europaea HOM05D005478 ORTHO05D006426 3.7e-06 56.2 88 65.9
Nitab4.5_0000326g0190 Nicotiana tabacum HOM05D006502 ORTHO05D007704 8.3e-06 55.1 50 56.0


User provided reference genes

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