Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Eucgr.I01721 Eucalyptus grandis HOM05D007296 ORTHO05D009201 7.5e-104 380.6 196 100.0
Haze_14767 Corylus avellana HOM05D007296 ORTHO05D009201 1.2e-24 117.5 123 56.9
CiPaw.04G030100 Carya illinoinensis HOM05D007296 ORTHO05D009201 1.5e-24 117.1 154 48.7
Potri.001G342100 Populus trichocarpa HOM05D007296 ORTHO05D009201 2.0e-24 116.7 121 55.4
Cfa007330 Carpinus fangiana HOM05D007296 ORTHO05D009201 3.4e-24 115.9 122 53.3
Hma1.2p1_0818F.1_g223340 Hydrangea macrophylla HOM05D007296 ORTHO05D009201 4.5e-24 115.5 147 48.3
CiPaw.03G046500 Carya illinoinensis HOM05D007296 ORTHO05D009201 5.8e-24 115.2 119 58.0
Ciclev10017118m.g Citrus clementina HOM05D007296 ORTHO05D009201 2.2e-23 113.2 122 53.3
CSS0008661 Camellia sinensis var. sinensis HOM05D007296 ORTHO05D009201 3.8e-23 112.5 146 47.9
QL02p073829 Quercus lobata HOM05D007296 ORTHO05D009201 1.1e-22 110.9 119 53.8
Duzib187G0331 Durio zibethinus HOM05D007296 ORTHO05D009201 1.9e-22 110.2 124 50.8
Dinv33417 Davidia involucrata HOM05D007296 ORTHO05D009201 4.2e-22 109.0 115 53.0
Thecc.04G021100 Theobroma cacao HOM05D007296 ORTHO05D009201 4.2e-22 109.0 115 56.5
TAR371G0818 Trochodendron aralioides HOM05D007296 ORTHO05D009201 1.6e-21 107.1 147 46.9
Gohir.A09G030400 Gossypium hirsutum HOM05D007296 ORTHO05D009201 6.0e-21 105.1 124 50.0
PGR142G0831 Punica granatum HOM05D007296 ORTHO05D009201 7.9e-21 104.8 110 58.2
Gohir.D09G030000 Gossypium hirsutum HOM05D007296 ORTHO05D009201 2.3e-20 103.2 124 49.2
Lsat_1_v5_gn_2_91081 Lactuca sativa HOM05D007296 ORTHO05D009201 2.3e-20 103.2 124 48.4
Lj1g0014101 Lotus japonicus HOM05D007296 ORTHO05D009201 3.0e-20 102.8 119 47.1
Glyma.16G068200 Glycine max HOM05D007296 ORTHO05D009201 5.1e-20 102.1 117 51.3
Atru.chr6.2441 Acer truncatum HOM05D007296 ORTHO05D009201 6.7e-20 101.7 158 45.6
Lalb_Chr22g0360681 Lupinus albus HOM05D007296 ORTHO05D009201 5.7e-19 98.6 117 46.2
Nn3g16657 Nelumbo nucifera HOM05D007296 ORTHO05D009201 9.7e-19 97.8 148 43.2
Manes.15G152600 Manihot esculenta HOM05D007296 ORTHO05D009201 1.6e-18 97.1 148 46.6
Medtr7g033080 Medicago truncatula HOM05D007296 ORTHO05D009201 2.2e-18 96.7 117 43.6
Cpa.g.sc130.72 Carica papaya HOM05D007296 ORTHO05D009201 4.8e-18 95.5 131 48.1
Lsat_1_v5_gn_0_6101 Lactuca sativa HOM05D007296 ORTHO05D009201 4.8e-18 95.5 119 51.3
Nn4g22550 Nelumbo nucifera HOM05D007296 ORTHO05D009201 4.8e-18 95.5 115 48.7
TWI56G0033 Tripterygium wilfordii HOM05D007296 ORTHO05D009201 4.8e-18 95.5 121 47.9
VMungo1383G0878 Vigna mungo HOM05D007296 ORTHO05D009201 4.8e-18 95.5 117 47.9
PSO017G3033 Papaver somniferum HOM05D007296 ORTHO05D009201 8.2e-18 94.7 128 46.1
DCAR_021738 Daucus carota HOM05D000631 ORTHO05D000524 1.8e-17 93.6 142 40.8
Glyma.19G078800 Glycine max HOM05D007296 ORTHO05D009201 1.8e-17 93.6 134 45.5
Cc02_g32290 Coffea canephora HOM05D007296 ORTHO05D009201 2.4e-17 93.2 111 51.4
SalBow1G6940 Salvia bowleyana HOM05D007296 ORTHO05D009201 2.4e-17 93.2 115 49.6
Aqoxy5G03689 Aquilegia oxysepala HOM05D007296 ORTHO05D009201 6.9e-17 91.7 88 47.7
Prupe.3G295100 Prunus persica HOM05D007296 ORTHO05D009201 6.9e-17 91.7 116 50.9
TPR.G1088 Trifolium pratense HOM05D007296 ORTHO05D009201 6.9e-17 91.7 113 45.1
Aqoxy7G03797 Aquilegia oxysepala HOM05D007296 ORTHO05D009201 9.0e-17 91.3 89 48.3
CAN.G473.34 Capsicum annuum HOM05D007296 ORTHO05D009201 2.6e-16 89.7 109 45.9
CiPaw.11G015200 Carya illinoinensis HOM05D007296 ORTHO05D009201 2.6e-16 89.7 113 46.9
FvH4_6g51980 Fragaria vesca HOM05D007296 ORTHO05D009201 3.4e-16 89.4 151 42.4
Psat3g172000 Pisum sativum HOM05D007296 ORTHO05D009201 4.5e-16 89.0 117 39.3
Ca_06610_v3 Cicer arietinum L. HOM05D007296 ORTHO05D009201 5.9e-16 88.6 118 42.4
Ca_30727_v3 Cicer arietinum L. HOM05D007296 ORTHO05D009201 5.9e-16 88.6 118 42.4
Sc16g0004380 Simmondsia chinensis HOM05D007296 ORTHO05D009201 7.7e-16 88.2 135 41.5
Thecc.03G117800 Theobroma cacao HOM05D007296 ORTHO05D009201 7.7e-16 88.2 115 42.6
FAN02G1968 Fragaria x ananassa HOM05D007296 ORTHO05D009201 1.0e-15 87.8 151 42.4
FAN14G0692 Fragaria x ananassa HOM05D007296 ORTHO05D009201 2.2e-15 86.7 151 42.4
ATR0199G042 Amborella trichopoda HOM05D007296 ORTHO05D009201 2.9e-15 86.3 123 43.1
FAN09G0682 Fragaria x ananassa HOM05D007296 ORTHO05D009201 5.0e-15 85.5 151 41.1
ClCG09G019420 Citrullus lanatus HOM05D007296 ORTHO05D009201 6.5e-15 85.1 115 42.6
Phvul.008G151600 Phaseolus vulgaris HOM05D007296 ORTHO05D009201 6.5e-15 85.1 91 52.7
Prupe.5G162900 Prunus persica HOM05D007296 ORTHO05D009201 1.4e-14 84.0 137 42.3
MBI10_g42976_MAGBIO Magnolia biondii HOM05D007296 ORTHO05D009201 1.9e-14 83.6 117 42.7
SGA_v2.0_scaffold18G08254 Striga asiatica HOM05D007296 ORTHO05D009201 1.9e-14 83.6 115 43.5
Migut.H00030 Erythranthe guttata HOM05D007296 ORTHO05D009201 3.2e-14 82.8 137 40.9
Sabra15G0109100 Salix brachista HOM05D000631 ORTHO05D000524 3.2e-14 82.8 151 37.7
TAR374G0807 Trochodendron aralioides HOM05D007296 ORTHO05D009201 4.2e-14 82.4 82 52.4
Ca_30679_v3 Cicer arietinum L. HOM05D007296 ORTHO05D009201 5.5e-14 82.0 113 41.6
unitig_0.g1597 Utricularia gibba HOM05D004929 ORTHO05D006492 7.2e-14 81.6 131 46.6
PGSC0003DMG400012614 Solanum tuberosum HOM05D007296 ORTHO05D009201 9.4e-14 81.3 110 42.7
FAN05G3275 Fragaria x ananassa HOM05D007296 ORTHO05D009201 2.1e-13 80.1 151 39.7
Aqoxy3G01286 Aquilegia oxysepala HOM05D007296 ORTHO05D009201 2.7e-13 79.7 111 37.8
CsaV3_5G026960 Cucumis sativus L. HOM05D007296 ORTHO05D009201 2.7e-13 79.7 129 41.1
Glyma.05G115500 Glycine max HOM05D007296 ORTHO05D009201 3.6e-13 79.3 116 44.8
Manes.14G057736 Manihot esculenta HOM05D007296 ORTHO05D009201 3.6e-13 79.3 118 41.5
COL.COLO4_30221 Corchorus olitorius HOM05D007296 ORTHO05D009201 4.6e-13 79.0 108 43.5
Glyma.19G051600 Glycine max HOM05D007296 ORTHO05D009201 4.6e-13 79.0 121 43.0
Gorai.006G035000 Gossypium raimondii HOM05D007296 ORTHO05D009201 1.0e-12 77.8 124 41.9
Sed0024202 Sechium edule HOM05D007296 ORTHO05D009201 1.0e-12 77.8 138 39.1
Gohir.A07G055400 Gossypium hirsutum HOM05D007296 ORTHO05D009201 1.4e-12 77.4 114 43.0
Lj4g0005296 Lotus japonicus HOM05D007296 ORTHO05D009201 1.4e-12 77.4 115 41.7
SGA_v2.0_scaffold47G17522 Striga asiatica HOM05D000631 ORTHO05D000524 1.8e-12 77.0 165 35.2
Gohir.D07G059700 Gossypium hirsutum HOM05D007296 ORTHO05D009201 2.3e-12 76.6 114 43.0
Gorai.001G063200 Gossypium raimondii HOM05D007296 ORTHO05D009201 2.3e-12 76.6 114 43.0
Ah.12g055220 Amaranthus hybridus HOM05D007296 ORTHO05D009201 3.0e-12 76.3 140 37.9
MELO3C021597.2 Cucumis melo HOM05D007296 ORTHO05D009201 3.0e-12 76.3 128 39.1
Glyma.05G042900 Glycine max HOM05D007296 ORTHO05D009201 1.5e-11 73.9 113 41.6
Ciclev10022926m.g Citrus clementina HOM05D007296 ORTHO05D009201 2.0e-11 73.6 112 42.0
Thhalv10014918m.g Eutrema salsugineum HOM05D007296 ORTHO05D009201 2.0e-11 73.6 93 49.5
ECA246G1504 Erigeron canadensis HOM05D007296 ORTHO05D009201 3.3e-11 72.8 110 40.9
DCAR_015066 Daucus carota HOM05D007296 ORTHO05D009201 4.3e-11 72.4 112 37.5
Migut.K01416 Erythranthe guttata HOM05D007296 ORTHO05D009201 4.3e-11 72.4 121 42.1
THA.LOC104821171 Tarenaya hassleriana HOM05D007296 ORTHO05D009201 9.7e-11 71.2 121 44.6
A10p24110 Brassica napus HOM05D007296 ORTHO05D009201 1.7e-10 70.5 93 49.5
BraA10t44476Z Brassica rapa HOM05D007296 ORTHO05D009201 1.7e-10 70.5 93 49.5
Carub.0006s1259 Capsella rubella HOM05D007296 ORTHO05D009201 1.7e-10 70.5 94 51.1
CARHR198900 Cardamine hirsuta HOM05D007296 ORTHO05D009201 1.7e-10 70.5 106 48.1
AT5G14410 Arabidopsis thaliana HOM05D007296 ORTHO05D009201 2.2e-10 70.1 94 51.1
SGA_v2.0_scaffold135G34923 Striga asiatica HOM05D007296 ORTHO05D009201 2.2e-10 70.1 110 43.6
Lalb_Chr07g0183081 Lupinus albus HOM05D007296 ORTHO05D009201 2.8e-10 69.7 114 39.5
Sp6g29610 Schrenkiella parvula HOM05D007296 ORTHO05D009201 2.8e-10 69.7 86 51.2
Aa31LG11G15190 Aethionema arabicum HOM05D007296 ORTHO05D009201 4.8e-10 68.9 94 45.7
EL10Ac5g12075 Beta vulgaris HOM05D007296 ORTHO05D009201 4.8e-10 68.9 124 40.3
AL6G25130 Arabidopsis lyrata HOM05D007296 ORTHO05D009201 6.3e-10 68.6 113 43.4
C09p62750 Brassica napus HOM05D007296 ORTHO05D009201 6.3e-10 68.6 92 50.0
BolC9t59112H Brassica oleracea HOM05D007296 ORTHO05D009201 6.3e-10 68.6 92 50.0
Solyc02g093525.1 Solanum lycopersicum HOM05D007296 ORTHO05D009201 1.4e-09 67.4 107 38.3
Sopen02g038130 Solanum pennellii HOM05D007296 ORTHO05D009201 1.8e-09 67.0 108 38.9
QL10p006090 Quercus lobata HOM05D007296 ORTHO05D009201 2.4e-09 66.6 107 40.2
BcaB08g36986 Brassica carinata HOM05D007296 ORTHO05D009201 5.3e-09 65.5 85 45.9
RcHm_v2.0_Chr2g0173451 Rosa chinensis HOM05D007296 ORTHO05D009201 9.1e-09 64.7 149 38.9
Phvul.004G061700 Phaseolus vulgaris HOM05D007296 ORTHO05D009201 2.0e-08 63.5 83 42.2
Phvul.003G206500 Phaseolus vulgaris HOM05D007296 ORTHO05D009201 4.5e-08 62.4 113 37.2
SalBow7G1031 Salvia bowleyana HOM05D007296 ORTHO05D009201 4.5e-08 62.4 117 38.5
Actinidia33329 Actinidia chinensis HOM05D007296 ORTHO05D009201 5.9e-08 62.0 76 50.0
Os01g0938400 Oryza sativa ssp. japonica HOM05D024678 ORTHO05D025976 8.5e-07 58.2 59 54.2
VMungo1215G1852 Vigna mungo HOM05D007296 ORTHO05D009201 8.5e-07 58.2 113 36.3


User provided reference genes

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